Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0743 TGTCAGCTGCAGTCATTGGAGAAGCTGGCTCTTGGGTTCAATTCCTTGCACGGTGAAGCCACGGAGGATCTGAACAATTGTGTGAAATTGAAGTACCTGGATCTGGGAAACAATTTCTTCTCCGGCTCCTTCCCCGACGTGCATTCTCTGAGCCAATTACAGTATCTGTATTTGAATACAAGTGGGTTTTCCGGGAAGTTCCCGTGGAAATCCGTCGGGAATTTGACCGGATTGGTTCAGCTCAGCCTTGGAGATAACGCTTTCGACAACACTTCGTTTCCGGTTGAGGTCACAAATCTGAAGAACCTCAATTGGCTTTACTTGTCCAACTGCAGCTTAACAGGGGAAATTCCAAGGTCTATAGGTAATCTCACTCAACTTCGTAATTTGGAGTTTTCCGAGAATTATATAACGGGGACTATTCCGGCGGAGATTGGGAACCTTCGAAATCTATGGCAGTTGGAATTCTACGGCAATCAATTGACGGGAAAACTTCCGGTGGGATTAAGAAATCTAACCAGTCTTACGAATTTTGACGCTTCGATGAATCATCTTCAAGGGGATCTCTCGGAGCTGAGGTTTTTAAACGGCCTGGTTTCTCTGCAACTTTTTGACAACCAAATTTCCGGCCAGGTCCCGGCGGAGTTCGGTGAATTCAAGTCGCTGACGAATCTCTCCCTCTACAACAACAGGCTTACGGGTCCTCTTCCGCAATCGCTTGGTTCTTGGACGGCGTTCAATTATATCGATGTCTCTGAAAATCAATTGACGGGCACAATTCCTCCCGATATGTGCAAGCAGCGGACGATGCAGAAGCTACTCATTCTGCAGAACAATTTCTCCGGTGAGATTCCGGCGACCTACGCTAATTGCTCCACTTTGACCAGATTCAGAGTAAGCCAGAACTCGCTCACCGGCGTCGTTCCGTCCGGGATTTGGGGATTACCGAAAGTGAATATAATCGATCTCGCGTCGAATCAATTGGAAGGTTCGATTACTTCCGATATAGCGAAGGCGGTGGCTCTCTCGGAATTGTACGTCGGAAACAATCTTTTATCTGGACGGTTGCCATTGGAGATATCGCAAGCTAAATCTCTCGCTTCGGTCGACCTGAGAAATAATAATTTCTCCGACGAAATTCCGACGACGATTGGCGACCTGAAGGATCTAGATAGCCTCGAATTTCAGGGGAATAAATTCTCCGGTTCGATTCCAGAGACGATTGGCTCGTGTAGTTCCCTGAGTATCGTCAATCTCGCGGAGAATTTCTTCTCCGGCGAAATCCCTTCGTCTCTAGGGTTTCTTCCCGTTCTGAACTCTCTGAATCTCTCCAATAACGGCCTCTCCGGTGAAATCCCCTCAACTCTTTCACATCTGAAGCTAAGTCTCCTCGATCTTTCCAACAATCAATTAACCGGCGTGTTGCCGGAGAATATCTCCGGCCTGACGAAGCTGAAATCCATGGTGCTGACGACTTGTATGCTGGAGGGTCGGATTCCAGCGGCGATTGGGAACATGACGGCGCTCGTTGACCTCGAATTGAGCGGCAATTTCCTCGTCGGACGGATCCCCAAGGAAATCGCACTGCTGAAGAATTTGAGGCAGTTGGAGCTTTATTACAATTTATTAATCGGGGAAATTCCAGAGGAGATCGGGAATTTAACAGAGCTCGTGGACTTGGACATGTCGGTCAACCGGTTGACTGGAAAACTTCCAGAGTCGATTTGTCGTCTTCCTAAACTCGAAGTTCTGCAGCTTTACAACAACAGCCTCACTGGGGAGATTCCTGCTGTGATTTCCAATTCAACAACTCTCACCATGTTATCCCTTTACGACAATTACATGACGGGACAAGTTCCGGGAAATTTGGGGCAGCTGTCCCCCATGGTCGTTCTCGACTTGTCGGAAAACAACTTCTACGGTCCGTTGCCGACAGATGTCTGCGGAGGAGGTAAATTGATGTATTTTCTGGTGTTGGAGAATAAATTTTCCGGTGAGATCCCACCGTCGTACGGGAAATGCCAGTCCCTTTTACGGTTCCGGGTCAGTTCGAATCGTTTGGAAGGTGCGGTGCCGGCGGGGCTCTTGGGGCTTCCCCACGTTTCGATTATTGATTTCGGGAATAATAATTTGAGTGGGGAAATTCCGAATTCTTTCGTTAAAGCCAGGAATCTGTCGGAATTGTTCATGCAGGGTAATAAGATTTCCGGCGTGTTGCCGCCGGAAATTTCTGGGGCGACCAATTTGGTTAAAATCGATTTCAGCAACAATCTCTTATCTGGTCCGATCCCATCGGAAATTGGGAATCTGAATCGGCTTAATTTGCTGCTTTTGCAAGGAAATCGTCTGAATTCTTCAATACCCAGTTCGCTTTCTGAGCTTAAATCTCTCAACGTCCTTGATCTCTCCGACAATCGATTGACGGGGAAAATCCCAGAAAGTCTCTGCGAATTGTTGCCGAATTCCATAAATTTCTCGAACAATCAACTCTCCGGCCCAATTCCTCTGTCTCTGATCAAAGGTGGGTTAGTGGAAAGCTTCTCCGGCAACCCGGGACTGTGCGTTTCGGTCTACTTGGACTCATCGGACCAGAAATTCCCCATCTGTTCGCAGAATTACAATCGAAAGCGATTGAATTCCATCTGGGCAATCGGAGTATCGGCATTCATAATCCTGATCGGAGCTGCCCTGTATCTAAGACGGCGATTGAGCAGAGAAAAAGCAGAAATGGAACAGGAGGAGACGCTGTCGACATCGTTCTTCTCGTACGACGTGAAGAGCTTCCACCGAATTAGCTTCGACCCAAGAGAGATAATCGAATCGATGGTGGACAAGAACATAGTGGGCCGCGGCGGGTCGGGGATGGTGTACAAAATAGAACTAAGAAGCGGGGAAATGGTAGCGGTGAAAAAGCTGTGGAGCCGGAAGGGGAAGGATACGGCGTCGGATCAGGAGCAGCTGCATCTGGTGGACAAGGAGCTGAAGACGGAAGTGGAGACGCTGGGGAGCATAAGGCACAAGAACATAGTGAAGCTGTACTGCTACTTCTCGAGCGTAGAGTGCAGCCTGTTGGTTTATGAGTACATGCCAAATGGGAACTTGTGGGACGCGCTGCACAAGGGCTGGGTCCATTTGGAGTGGCCGACGCGGCACCAGATAGCGCTGGGAATAGCGCAGGGATTGGCTTATCTGCACCACGATCTGTTGCCTTCTATAATCCATAGGGACATTAAGACCACTAATATTCTGCTGGATGTCAATTATCACCCTAAAGTTGCGGACTTCGGTATTGCTAAGGTTTTGCAAGCCAGAGCCGGCAAGGACTCCGCCACCACCGTCATTGCTGGCACTTACGGCTATCTCGCCCCCGAATACGCGTATTCGTCGAAAGCAACGACAAAATGCGACGTGTACAGCTTTGGAATCGTGCTAATGGAGCTAATAACGGGGAAGAAACCAGTGGAGGCGGAGTTTGGGGAGAACAAGAACATTATATATTGGGTGTCGAACAAAGTGGACACAAAGGAAGGAGCCATGGAAGTTTTGGACAAGAGAGTTTCAGGGTCATTCAAGGACGAGATGATTCAAGTTCTAAGGATTGCCATTCGGTGCACCTACAAGAATCCAGCCCTTCGACCCACCATGAAGGAGGCGGTTCAGCTTCTCATTGAGGCTCACCCTTGCAAATTCGATTCTATTTCTCACTGCAACACGACCACCAAATGCAACTAA 3732 48.53 CQLQSLEKLALGFNSLHGEATEDLNNCVKLKYLDLGNNFFSGSFPDVHSLSQLQYLYLNTSGFSGKFPWKSVGNLTGLVQLSLGDNAFDNTSFPVEVTNLKNLNWLYLSNCSLTGEIPRSIGNLTQLRNLEFSENYITGTIPAEIGNLRNLWQLEFYGNQLTGKLPVGLRNLTSLTNFDASMNHLQGDLSELRFLNGLVSLQLFDNQISGQVPAEFGEFKSLTNLSLYNNRLTGPLPQSLGSWTAFNYIDVSENQLTGTIPPDMCKQRTMQKLLILQNNFSGEIPATYANCSTLTRFRVSQNSLTGVVPSGIWGLPKVNIIDLASNQLEGSITSDIAKAVALSELYVGNNLLSGRLPLEISQAKSLASVDLRNNNFSDEIPTTIGDLKDLDSLEFQGNKFSGSIPETIGSCSSLSIVNLAENFFSGEIPSSLGFLPVLNSLNLSNNGLSGEIPSTLSHLKLSLLDLSNNQLTGVLPENISGLTKLKSMVLTTCMLEGRIPAAIGNMTALVDLELSGNFLVGRIPKEIALLKNLRQLELYYNLLIGEIPEEIGNLTELVDLDMSVNRLTGKLPESICRLPKLEVLQLYNNSLTGEIPAVISNSTTLTMLSLYDNYMTGQVPGNLGQLSPMVVLDLSENNFYGPLPTDVCGGGKLMYFLVLENKFSGEIPPSYGKCQSLLRFRVSSNRLEGAVPAGLLGLPHVSIIDFGNNNLSGEIPNSFVKARNLSELFMQGNKISGVLPPEISGATNLVKIDFSNNLLSGPIPSEIGNLNRLNLLLLQGNRLNSSIPSSLSELKSLNVLDLSDNRLTGKIPESLCELLPNSINFSNNQLSGPIPLSLIKGGLVESFSGNPGLCVSVYLDSSDQKFPICSQNYNRKRLNSIWAIGVSAFIILIGAALYLRRRLSREKAEMEQEETLSTSFFSYDVKSFHRISFDPREIIESMVDKNIVGRGGSGMVYKIELRSGEMVAVKKLWSRKGKDTASDQEQLHLVDKELKTEVETLGSIRHKNIVKLYCYFSSVECSLLVYEYMPNGNLWDALHKGWVHLEWPTRHQIALGIAQGLAYLHHDLLPSIIHRDIKTTNILLDVNYHPKVADFGIAKVLQARAGKDSATTVIAGTYGYLAPEYAYSSKATTKCDVYSFGIVLMELITGKKPVEAEFGENKNIIYWVSNKVDTKEGAMEVLDKRVSGSFKDEMIQVLRIAIRCTYKNPALRPTMKEAVQLLIEAHPCKFDSISHCNTTTKCN 1243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5014068 5031390 + MC11g0623 Mch11g0743 679677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0743 1243 FunFam Inactive leucine-rich repeat receptor-like protein kinase 360 454 - -
Mch11g0743 1243 SUPERFAMILY RNI-like 249 636 - -
Mch11g0743 1243 SUPERFAMILY Protein kinase-like (PK-like) 930 1222 IPR011009 -
Mch11g0743 1243 SMART LRR_sd22_2 3 26 - -
Mch11g0743 1243 SMART LRR_sd22_2 746 772 - -
Mch11g0743 1243 SMART LRR_sd22_2 124 150 - -
Mch11g0743 1243 SMART LRR_sd22_2 219 251 - -
Mch11g0743 1243 SMART LRR_sd22_2 458 484 - -
Mch11g0743 1243 SMART LRR_sd22_2 554 580 - -
Mch11g0743 1243 SMART LRR_sd22_2 794 817 - -
Mch11g0743 1243 SMART LRR_sd22_2 530 549 - -
Mch11g0743 1243 SMART LRR_sd22_2 75 105 - -
Mch11g0743 1243 Pfam Protein kinase domain 945 1220 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0743 1243 Gene3D Ribonuclease Inhibitor 461 574 IPR032675 -
Mch11g0743 1243 FunFam Leucine-rich repeat receptor-like protein kinase 474 574 - -
Mch11g0743 1243 SUPERFAMILY L domain-like 546 864 - -
Mch11g0743 1243 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 441 1223 IPR050647 -
Mch11g0743 1243 SUPERFAMILY L domain-like 97 352 - -
Mch11g0743 1243 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1072 1084 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0743 1243 FunFam Receptor-like protein kinase 7 20 264 - -
Mch11g0743 1243 Pfam Leucine Rich Repeat 461 482 IPR001611 GO:0005515(InterPro)
Mch11g0743 1243 Pfam Leucine Rich Repeat 724 745 IPR001611 GO:0005515(InterPro)
Mch11g0743 1243 Pfam Leucine Rich Repeat 557 578 IPR001611 GO:0005515(InterPro)
Mch11g0743 1243 Pfam Leucine Rich Repeat 102 124 IPR001611 GO:0005515(InterPro)
Mch11g0743 1243 Pfam Leucine Rich Repeat 221 242 IPR001611 GO:0005515(InterPro)
Mch11g0743 1243 Pfam Leucine Rich Repeat 438 459 IPR001611 GO:0005515(InterPro)
Mch11g0743 1243 Pfam Leucine Rich Repeat 365 387 IPR001611 GO:0005515(InterPro)
Mch11g0743 1243 Pfam Leucine Rich Repeat 532 554 IPR001611 GO:0005515(InterPro)
Mch11g0743 1243 Pfam Leucine Rich Repeat 126 148 IPR001611 GO:0005515(InterPro)
Mch11g0743 1243 Pfam Leucine Rich Repeat 748 770 IPR001611 GO:0005515(InterPro)
Mch11g0743 1243 Pfam Leucine Rich Repeat 29 46 IPR001611 GO:0005515(InterPro)
Mch11g0743 1243 Pfam Leucine Rich Repeat 580 601 IPR001611 GO:0005515(InterPro)
Mch11g0743 1243 Pfam Leucine Rich Repeat 796 818 IPR001611 GO:0005515(InterPro)
Mch11g0743 1243 ProSiteProfiles Protein kinase domain profile. 942 1229 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0743 1243 FunFam Receptor protein-tyrosine kinase CEPR1 578 863 - -
Mch11g0743 1243 Gene3D Transferase(Phosphotransferase) domain 1 1029 1235 - -
Mch11g0743 1243 SMART LRR_typ_2 460 482 IPR003591 -
Mch11g0743 1243 SMART LRR_typ_2 578 602 IPR003591 -
Mch11g0743 1243 SMART LRR_typ_2 530 554 IPR003591 -
Mch11g0743 1243 SMART LRR_typ_2 219 243 IPR003591 -
Mch11g0743 1243 SMART LRR_typ_2 794 818 IPR003591 -
Mch11g0743 1243 SMART LRR_typ_2 387 411 IPR003591 -
Mch11g0743 1243 SMART LRR_typ_2 3 26 IPR003591 -
Mch11g0743 1243 SMART LRR_typ_2 100 124 IPR003591 -
Mch11g0743 1243 SMART LRR_typ_2 148 172 IPR003591 -
Mch11g0743 1243 SMART LRR_typ_2 435 459 IPR003591 -
Mch11g0743 1243 ProSitePatterns Protein kinases ATP-binding region signature. 948 971 IPR017441 GO:0005524(InterPro)
Mch11g0743 1243 FunFam Leucine-rich repeat receptor protein kinase EMS1 265 359 - -
Mch11g0743 1243 ProSiteProfiles Leucine-rich repeat profile. 796 818 IPR001611 GO:0005515(InterPro)
Mch11g0743 1243 FunFam receptor protein-tyrosine kinase CEPR1 925 1028 - -
Mch11g0743 1243 SUPERFAMILY L domain-like 2 138 - -
Mch11g0743 1243 Gene3D Ribonuclease Inhibitor 1 245 IPR032675 -
Mch11g0743 1243 SMART serkin_6 942 1229 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0743 1243 PRINTS Leucine-rich repeat signature 794 807 - -
Mch11g0743 1243 PRINTS Leucine-rich repeat signature 461 474 - -
Mch11g0743 1243 FunFam leucine-rich repeat receptor-like protein kinase TDR 1029 1233 - -
Mch11g0743 1243 Gene3D Ribonuclease Inhibitor 581 864 IPR032675 -
Mch11g0743 1243 Gene3D Ribonuclease Inhibitor 248 460 IPR032675 -
Mch11g0743 1243 Gene3D Phosphorylase Kinase; domain 1 925 1028 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0743 Mch-Chr11:5014068 Mch4g0284 Mch-Chr4:1818025 2.44E-83 dispersed
Mch4g0836 Mch-Chr4:5907015 Mch11g0743 Mch-Chr11:5014068 2.50E-90 transposed
Mch8g1023 Mch-Chr8:7219662 Mch11g0743 Mch-Chr11:5014068 6.84E-57 transposed
Mch1g1334 Mch-Chr1:15371501 Mch11g0743 Mch-Chr11:5014068 1.46E-55 wgd
Mch11g0743 Mch-Chr11:5014068 Mch8g0305 Mch-Chr8:2136812 1.23E-186 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77061 PF00069 Pkinase 9.70E-48 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0743 - - - 0.0