Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0764 ATGATGGCTGTGACCTCCGGCTGCAAGGACGCTGCTAACAAGATGGGCAGCGTGGATAATGGCAAGTACGTTAGGTACACGCCTGAGCAGGTGGAAGCTCTCGAGAGGCTCTACTATGAATGCCCCAAACCCAGTTCTATGCGCCGCCAGCAGCTCATCAGGGAGTGCCCAATTCTCTCCAACATCGAACCCAAACAGATCAAAGTTTGGTTCCAAAATCGCAGATGTAGAGAGAAACAGAGGAAGGAGGCATCACGCCTGCAAACTGTGAACAGGAAGCTGACGGCTATGAATAGACTCCTAATGGAGGAAAATGATAGATTGCAGAAACAGGTGTCGCAGCTTGTGTATGAGAACAGCTATTTTCGTCAACAGACCCAGAATGCGACCCTAGCCACCACGGACACAAGTTGCGAGTCAGTGGTGACAAGTGGTCAGCAGCATTTGACTCCGCCGCATCCACCGAAGGATGCCAGTCCCGCAGGACTTTTGTCTATTGCGGAGGAGACTTTAGCAGAGTTTCTATCAAAGGCTACTGGAACTGCTGTGGAGTGGGTCCAACTGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATCTCTCATGGCTGCACTGGAGTTGCAGCTCGTGCTTGTGGACTTGTGGGTCTCGAACCTACAAGAGTGGCTGAAATTCTTAAAGATTGGCCTTCTTGGTTTCGTGATTGCCGCGCTGTTGACGTTCTAAACGTCTTATCTACTGGAAATGGAGGAACGATTGAGCTTCTTTACATGCAGCTCTATGCACCTACTACTCTGGCACCCGCTCGTGATTTCTGGTTGCTGCGATACACATCTGTTTTGGAGGATGGTAGTCTTGTGGTCTGTGAAAGATCTCTTAACAATACCCAGAATGGTCCAAGTATGCCACCAGTACAAAACTTTGTGAGAGCAGAAATGCTACCGAGTGGGTATTTGATAAGACCATGTGAAGGCGGTGGATCAATCATCCATATAGTTGATCATATGGACTTAGAACCCTGGAGCGTGCCTGAAGTGTTGCGGCCTTTATACAAGTCATCTACTCTGCTTGCTCAGAAGAACACAATGGCAGCATTACGCTTATTGAGACAGATTTCACAAGAAGTTTCGCAACCAAATGTTACTGGTTGGGGAAGAAGACCTGCTGCTCTTCGCGCTCTTAGTCAGAGATTAAGCAGAGGTTTCAATGAAGCAGTTAATGGGTTTACAGACGAGGGATGGTCTTTGTTAGAAAGCGATGGCATTGATGATGTTACACTTCTTGTAAATTTGTCTCATGGCAAGACAATGATGGGTGCAAATATTTCATATTCTAATGGCTTTCCGTCTATGAGCAATGCTGTGCTTTGTGCCAAAGCATCAATGTTGTTACAGAATGTCACTCCAGCAATGCTCATTAGGTTCTTGAGAGAACACCGGTCAGAATGGGCAGACAGCAGTATTGATGCTTATTCAGCTGCTGCAATTAAGACCGGTCAGTGTGGTTTACCAGGATCTCATGCTGGAACTTTTGGGGGCCAGGTTATCCTTCCCTTGGCACAAACAGTTGAGCATGAAGAGGCAATTATTAAATTTGAAAACGTGGGCCATTTTAGGGATGATATGCTCATGCCTGGTGACATCTTCCTCCTCCAACTTTGCAATGGTGTGGATGAGAATGCAGTTGGTACTTCAGCCGAACTCATTTTTGCTCCAATTGATGCCTCTTTTTCTGATGATGCACCTATTCTACCATCTGGTTTCCGCATCATTCCTCTTGACTCTGGGATGGATGCTTCCAGTCCTAACCGCACGCTCGATCTTGCTTCAGCTCTTGATGTTGGACCTGCAGGGAATAAAGCTTCTGGTGATTATGCTGGTCAATCTGGAAAATCAAAATCTGTGATGACAATCGCATTCCAATTTGTTTTTGATGTTCACCTTCAAGATAACGTAGCAGCAATGGCACGGCAGTATGTCCGAAGCATTATAGCATCTGTTCAGAGGGTGGCACTGGCTCTCTCCCCTTCGCAATTTGGACCTCATTCTAACCTTCAGACACCAGCTGGCACTCCTGAAGCACAAACACTTGCTCGTTGGATCTGTCAAAGCTATAGGTGCTATATGGGCATGGAATTACTTAAAAACGAAGGAAGAGAAACCATTCTTAAATCCCTTTGGCATCACTCAGATGCAGTCATGTGCTGCTCTTCGAAGGCATTGCCAAATTTTACATTTGCAAATCAGGCTGGACTTGACATGCTTGAGACAACCTTGGTGGCTCTCCAAGACATTACTCTGGAGAAGATTTTTGATGACAATGGAAAGAAAACTTTAGCCTCAGAGTTCCCGCGGATAATGCAGCAGGGCTTTATTTGTCTTCAAGGGGGTGTCTGCTTGTCAAGCATGGGAAGGGCAGTATCCTATGAGAAAGCTGTGGCGTGGAAGGTTTTGAATGAAGAAGAAAATCCTCACTGTATTTGCTTCATGTTTATGAACTGGTCTTTTGTTTGA 2523 46.29 MMAVTSGCKDAANKMGSVDNGKYVRYTPEQVEALERLYYECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNRLLMEENDRLQKQVSQLVYENSYFRQQTQNATLATTDTSCESVVTSGQQHLTPPHPPKDASPAGLLSIAEETLAEFLSKATGTAVEWVQLPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDWPSWFRDCRAVDVLNVLSTGNGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQNFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYKSSTLLAQKNTMAALRLLRQISQEVSQPNVTGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSLLESDGIDDVTLLVNLSHGKTMMGANISYSNGFPSMSNAVLCAKASMLLQNVTPAMLIRFLREHRSEWADSSIDAYSAAAIKTGQCGLPGSHAGTFGGQVILPLAQTVEHEEAIIKFENVGHFRDDMLMPGDIFLLQLCNGVDENAVGTSAELIFAPIDASFSDDAPILPSGFRIIPLDSGMDASSPNRTLDLASALDVGPAGNKASGDYAGQSGKSKSVMTIAFQFVFDVHLQDNVAAMARQYVRSIIASVQRVALALSPSQFGPHSNLQTPAGTPEAQTLARWICQSYRCYMGMELLKNEGRETILKSLWHHSDAVMCCSSKALPNFTFANQAGLDMLETTLVALQDITLEKIFDDNGKKTLASEFPRIMQQGFICLQGGVCLSSMGRAVSYEKAVAWKVLNEEENPHCICFMFMNWSFV 840
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5156299 5163091 - MC11g0643 Mch11g0764 679698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0764 840 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 17 840 IPR044830 GO:0003700(InterPro)
Mch11g0764 840 FunFam Homeobox-leucine zipper protein REVOLUTA 22 77 - -
Mch11g0764 840 Gene3D - 14 88 - -
Mch11g0764 840 FunFam homeobox-leucine zipper protein ATHB-15 201 382 - -
Mch11g0764 840 CDD START_ArGLABRA2_like 160 375 - -
Mch11g0764 840 Gene3D - 200 376 IPR023393 -
Mch11g0764 840 SUPERFAMILY Bet v1-like 165 375 - -
Mch11g0764 840 SMART START_1 165 375 IPR002913 GO:0008289(InterPro)
Mch11g0764 840 Pfam MEKHLA domain 699 839 IPR013978 -
Mch11g0764 840 SMART HOX_1 19 85 IPR001356 GO:0003677(InterPro)
Mch11g0764 840 Pfam Homeodomain 22 80 IPR001356 GO:0003677(InterPro)
Mch11g0764 840 Coils Coil 91 118 - -
Mch11g0764 840 ProSiteProfiles START domain profile. 156 370 IPR002913 GO:0008289(InterPro)
Mch11g0764 840 Pfam START domain 166 374 IPR002913 GO:0008289(InterPro)
Mch11g0764 840 ProSiteProfiles 'Homeobox' domain profile. 17 81 IPR001356 GO:0003677(InterPro)
Mch11g0764 840 CDD bZIP 74 113 - -
Mch11g0764 840 CDD homeodomain 22 82 IPR001356 GO:0003677(InterPro)
Mch11g0764 840 SUPERFAMILY Homeodomain-like 22 84 IPR009057 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0764 Mch-Chr11:5156299 Mch9g0310 Mch-Chr9:2330285 0 dispersed
Mch11g0764 Mch-Chr11:5156299 Mch1g2089 Mch-Chr1:20268520 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42593 PF01852 START 7.70E-54 CL0209 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0764 K09338 - csv:101218438 1629.77