Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0790 ATGAATAAGAGAGAGAATTCAACCACCGAGGAGGGACCTGAAACAAAGGAGGACAATACAAGTTTGACATCACCAAATGATCAAGAACAAGATGAGCCATACATTCACAAAGTTGGGGTTCCACCAAAGCAAAATCTCTTGAAAGAAATCAAGTCCGGAGTGAAAGAAACATTTTTCCCAGATGATCCTCTGCGTTCATTTAAGGATCAAACCAAGGCGCGGAAATTTATTCTCGGCATCCAGGCTGTTTTCCCTATACTTGAATGGGGAAGAGATTACAATTTGACTAAGTTCAGAGGAGATCTTCTTGCTGGACTCACTATTGCTAGTCTCTGCATTCCTCAGGATATTGGGTATGCAAAGCTTGCAAATTTGGATCCGCAATATGGATTATACTCAAGTTTTGTTCCACCATTAATTTATGCACTTATGGGTAGCTCGAGAGATATAGCCATTGGTCCAGTTGCTGTTGTTTCTCTCTTGTTGGGAACACTAGTTCAAGCTGAAATCGATTCCACTACTAACCCAGAAGCATACAGGCGGCTGGTATTTACAGCTACATTCTTTGCAGGCATAACACAAGCCACTCTTGGGTTTCTGAGGCTGGGATTCCTAATTGACTTCTTGTCCCATGCTGCCATCGTTGGCTTCATGGGTGGAGCTGCCATCACCATTGCTCTCCAACAACTCAAAGGCTTTCTTGGCATAAAAAAATTCACAAAGAAAACAGACATTATCAACGTTATGCAGTCGGTATTCGGCTCAATCCAACATGGATGGAACTGGCAGACAATAGTCATTGCAGCAACCTTTCTTTTCTTTCTTCTATTTGCAAAATTCGTTGGAAAGAAGAACAAGAGGCTCTTTTGGGTGCCTGCAGTTGCTCCCCTGACATCTGTTGTTCTGTCAACCCTTTTGGTTTACATTACTCATGCAGAGAAGGAAGGAGTTGCAATTGTGAAACACATAGACCAAGGAATCAATCCCCCATCTGTGAAAGAATTATATTTCTCAGGTGAATACCTTGTAAAAGGGTTTAAGATCGGTGTCGTGGCGGGCATGATAGCATTGACGGAAGCCATTGCTATAGGAAGAACGTTTGCTTCAATGAAGGACTATCAAATTGATGGGAACAAGGAAATGGTGGCAATGGGGTTCATGAATGTTGTTGGCTCAATGACTTCCTGCTATGTAGCAACAGGTTCGTTCTCTCGATCAGCCGTAAATTACATGGCTGGCTGCCAAACTACAGTTTCCAACATTGTGATGTCCATTGTAGTATTCCTAACTCTGGAATTCCTCACCCCACTTTTCAAATACACTCCAAACGCGATTCTGTCTGCTATCATCATAAACGCTGTGATCAATCTAGTTGACTTGCACGCAGCGTTGTTGATATGGAAGATTGATAAATTTGATTTTGTTGCTTGTATGGGAGCCTTCCTCGGTGTCATATTTTTCTCTGTTGAGATAGGCCTTCTAATTGCGGTCTCCATTTCCTTCGCCAAAATCCTTCTACAGGTTACCAGACCAAGGACTGCAATTCTTGGAAATATCCCCAGGACGTCTGTTTACCGAAACATACAGCAATATCCCGAAGCAATCAAAGTCTCTGGCCTTTTGATTGTGAGAGTTGATTCAGCAATTTACTTTTCCAACTCGAATTACATTAAGGAGAGGATATTGAGATGGCTGGCTGATGAGGAAGAATTGACTAAAAAGTCATACCAGAACAGAATCCAGTTTCTGGTAGTTGAAATGTCACCTGTTACTGACATAGACACGAGTGGCATACATGCTTTGGAAGAGCTAAATGGGAGCCTCAAGAAAAGAGAAATTCAGCTGATTCTGGCAAATCCAGGGCCCGTGGTGATCCACAAGCTTCACGCGTCCAAGTTTCCAGATTTGATAGGCCAAGACAACATCTTCCTGACAGTTGCAGATGCAGTCTCATCTTGTAATCCAAAGATGATGGACGAAGCTTAG 1986 42.6 MNKRENSTTEEGPETKEDNTSLTSPNDQEQDEPYIHKVGVPPKQNLLKEIKSGVKETFFPDDPLRSFKDQTKARKFILGIQAVFPILEWGRDYNLTKFRGDLLAGLTIASLCIPQDIGYAKLANLDPQYGLYSSFVPPLIYALMGSSRDIAIGPVAVVSLLLGTLVQAEIDSTTNPEAYRRLVFTATFFAGITQATLGFLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKKFTKKTDIINVMQSVFGSIQHGWNWQTIVIAATFLFFLLFAKFVGKKNKRLFWVPAVAPLTSVVLSTLLVYITHAEKEGVAIVKHIDQGINPPSVKELYFSGEYLVKGFKIGVVAGMIALTEAIAIGRTFASMKDYQIDGNKEMVAMGFMNVVGSMTSCYVATGSFSRSAVNYMAGCQTTVSNIVMSIVVFLTLEFLTPLFKYTPNAILSAIIINAVINLVDLHAALLIWKIDKFDFVACMGAFLGVIFFSVEIGLLIAVSISFAKILLQVTRPRTAILGNIPRTSVYRNIQQYPEAIKVSGLLIVRVDSAIYFSNSNYIKERILRWLADEEELTKKSYQNRIQFLVVEMSPVTDIDTSGIHALEELNGSLKKREIQLILANPGPVVIHKLHASKFPDLIGQDNIFLTVADAVSSCNPKMMDEA 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5322321 5328156 + MC11g0666 Mch11g0790 679724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0790 661 Pfam Sulfate permease family 98 479 IPR011547 GO:0016020(InterPro)
Mch11g0790 661 NCBIfam sulfate permease 85 649 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Mch11g0790 661 Gene3D STAS domain 510 657 IPR036513 -
Mch11g0790 661 ProSiteProfiles STAS domain profile. 530 653 IPR002645 -
Mch11g0790 661 FunFam Sulfate transporter 31 510 656 - -
Mch11g0790 661 MobiDBLite consensus disorder prediction 1 17 - -
Mch11g0790 661 SUPERFAMILY SpoIIaa-like 532 654 IPR036513 -
Mch11g0790 661 MobiDBLite consensus disorder prediction 1 38 - -
Mch11g0790 661 Pfam STAS domain 531 649 IPR002645 -
Mch11g0790 661 PANTHER SULFATE TRANSPORTER 59 653 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch11g0790 661 CDD STAS_SulP_like_sulfate_transporter 531 646 - -
Mch11g0790 661 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0703 Mch-Chr10:4856867 Mch11g0790 Mch-Chr11:5322321 2.14E-218 dispersed
Mch11g0790 Mch-Chr11:5322321 Mch4g1714 Mch-Chr4:20274672 0 dispersed
Mch4g2105 Mch-Chr4:23112478 Mch11g0790 Mch-Chr11:5322321 2.00E-122 transposed
Mch9g1753 Mch-Chr9:19471372 Mch11g0790 Mch-Chr11:5322321 3.45E-18 transposed
Mch11g0790 Mch-Chr11:5322321 Mch4g1713 Mch-Chr4:20250577 2.16E-213 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0790 K17470 - csv:101207370 1108.59