Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0819 ATGGATGGCCAGAAAAGTCAGTTGAAGCTGAAGCTTACGCGAACTCAGTCGTCGCTGCTCCGTTCTTCGCCCACTTTCCGATCGTCTGTTCATAGCTTAACGTCCGTCACCGAGGGGGACCTTGTCGCCGGCCACAAAGAGGATGACGATGAGGAGAAGCAGAAGCCTAAGAAGCCCCGGAGGTCCGGTTCGTCACCGAGAACCGGATTGAACCGATTTGCGAATCGCGTTCTTGCTGCGGCTTTGCTTGCGTGCTTTACCTTCTTCTCGCTGCTGTTCGCGTCTTTCTTTCTTAGAAAGGATGGGCTACTCCCCTCGGAAAACCTATTATTAGCTCTGATTTTCGTTGCTATTACGCTTCTATTTGCGAGCAAGAATAAGGGCTTAATTTTACACATTCTTTCGTCTATCAAGCATGCCTGGCACGAGAATGCGAAGAGATTCTGTTTCTCCAGGACCGATTCCACTCCGATCCAGTGGTACATTGGGGATTCGGACGGAACTGCAGACGCCGAAAAGGAGAGGAAAATCATCAGAGAGGGCGTAGAGTTCTATAGCAATGGCGATTTCTACGAGGGAGAGTTCCACAATGGGAGTTGCAACGGTAGTGGGGTTTACAACTACTTTCTAAGTGGTAGGTACGAAGGAGATTGGGTGGATGGGAGGTATGATGGCTATGGGGTTGAGAGCTGGGCGAAGGGGAGTCGATACAGGGGCCAGTATCGACAGGGTCTGAGACATGGCTTTGGAGTGTACAAGTTGTTCACGGGGGACACCTATGCCGGCGAGTGGTGTAATGGGCAAAGCCATGGCGTTGGGGTACAGACTTGCGCTGATGGTAGCTGCTATGTTGGCGAATTCAAGCGTGGCGTCAAGCATGGTCTTGGATGTTACTATTTCAGAAATGGAGATAAATATGCTGGAGAGTACTTTGGGGACAAAATACATGGTTTCGGAGCATATCATTTCGCGAATGGCCATTGTTACGAAGGATCCTGGCACGAAGGTCAAAGGCAAGGGTATGGCATGTATACTTTCAGAAACAGCGAAGCCAAATGCGGCGAATGGGATGCTGGCAACCTCAAACATCCTCTCCTGCCGCTAACCGATGCCATTGTCCAAGCCGTTCAGGCATCTAGAAAGACAGCAAATAACGCCATCAACCTTCCCCGGGTGGATGAACAAGTGAACAAGGCCATCTTGGCTGCTAACAGAGCGGCTACAGCGGGCAGAGTCGCCGCCATCAAAGCCGTGCAAAATCGAATGGATGGTAAATTTTGCGACATAGATGTTATGTAA 1299 50.35 MDGQKSQLKLKLTRTQSSLLRSSPTFRSSVHSLTSVTEGDLVAGHKEDDDEEKQKPKKPRRSGSSPRTGLNRFANRVLAAALLACFTFFSLLFASFFLRKDGLLPSENLLLALIFVAITLLFASKNKGLILHILSSIKHAWHENAKRFCFSRTDSTPIQWYIGDSDGTADAEKERKIIREGVEFYSNGDFYEGEFHNGSCNGSGVYNYFLSGRYEGDWVDGRYDGYGVESWAKGSRYRGQYRQGLRHGFGVYKLFTGDTYAGEWCNGQSHGVGVQTCADGSCYVGEFKRGVKHGLGCYYFRNGDKYAGEYFGDKIHGFGAYHFANGHCYEGSWHEGQRQGYGMYTFRNSEAKCGEWDAGNLKHPLLPLTDAIVQAVQASRKTANNAINLPRVDEQVNKAILAANRAATAGRVAAIKAVQNRMDGKFCDIDVM 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5517684 5520207 + MC11g0689 Mch11g0819 679753

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0819 432 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 256 359 - -
Mch11g0819 432 MobiDBLite consensus disorder prediction 1 36 - -
Mch11g0819 432 MobiDBLite consensus disorder prediction 1 68 - -
Mch11g0819 432 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 266 311 - -
Mch11g0819 432 Gene3D - 266 311 - -
Mch11g0819 432 MobiDBLite consensus disorder prediction 41 59 - -
Mch11g0819 432 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 181 257 - -
Mch11g0819 432 Gene3D - 221 265 - -
Mch11g0819 432 Gene3D - 312 372 - -
Mch11g0819 432 Gene3D - 173 220 - -
Mch11g0819 432 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 138 422 - -
Mch11g0819 432 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 220 265 - -
Mch11g0819 432 Pfam MORN repeat 260 281 IPR003409 -
Mch11g0819 432 Pfam MORN repeat 283 304 IPR003409 -
Mch11g0819 432 Pfam MORN repeat 191 206 IPR003409 -
Mch11g0819 432 Pfam MORN repeat 237 259 IPR003409 -
Mch11g0819 432 Pfam MORN repeat 214 236 IPR003409 -
Mch11g0819 432 Pfam MORN repeat 306 327 IPR003409 -
Mch11g0819 432 Pfam MORN repeat 329 348 IPR003409 -
Mch11g0819 432 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 175 219 - -
Mch11g0819 432 SMART morn 304 325 IPR003409 -
Mch11g0819 432 SMART morn 327 348 IPR003409 -
Mch11g0819 432 SMART morn 258 279 IPR003409 -
Mch11g0819 432 SMART morn 281 302 IPR003409 -
Mch11g0819 432 SMART morn 212 233 IPR003409 -
Mch11g0819 432 SMART morn 189 211 IPR003409 -
Mch11g0819 432 SMART morn 235 256 IPR003409 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0819 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0819 Mch-Chr11:5517684 Mch7g0829 Mch-Chr7:12871945 1.64E-18 dispersed
Mch11g0819 Mch-Chr11:5517684 Mch4g1755 Mch-Chr4:20593489 1.05E-91 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g292 . Blo12g00674 . Bda03g00530 Bpe02g00076 Bpe04g00484 . . Cmo04g02460 Cmo15g00707 . Cma09g00805 . . . Cpe06g00640 . . . . . . . . Cla08g00565 Cam08g0982 Cec08g0571 Cco08g0681 Clacu08g0690 . Cre08g0504 Cone4ag1389 Cone7ag1546 Cone17ag1274 Cone20ag0452 Lsi04g02379 Csa04g01814 . . . . Bda11g00744 . . . . . . . Cmo09g00798 . . Car04g02278 Car09g00721 Cpe01g02040 . Bhi09g02656 . . . Hepe01g2270 Mch11g0819 . Cla11g01525 Cam11g1585 Cec11g1614 Cco11g1615 Clacu11g1742 Cmu11g1560 Cre11g1976 Lsi08g00414 . Chy07g00660 Cme07g00868
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001672 2 2 3 1 2 1 4 2 1 2 2 2 3 2 2 4 2 4 4 2 2 2 2 2 2 2 2 4 2 1 68