Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0824 ATGGGAGCAGAAACAGGGCTTGCAATGTTCTGTGGAGCCATCCACAAAATAAAGCCCTATTTGGCCATGGTTTCCCTTCAATTCGGGTACGCTGGCATGTACATCGTCACACTCCTTTGTTTTAAGAAGGGCATGAGTCATTACGTTCTCGCCGTCTACCGACATGTCGTCGCCACTATTGTCATCTCCCCCTTTGCCCTCGTCCTCGAAAGGAAAATAAGACCAAAGTTGACACTCCCCATAATTTTACGCATAATGCTCCTCGGCTTTCTCGAGCCAGTGCTGGATCAAAATCTTTATTACGTGGGCTTGAAGTTTACTTCAGCAACATTCACGTCTGTCACTCTTAATATTCTCCCTGCTGTTACCTTCATCATGGCTCTCATTTTCAGGCTGGAAAGTGTGAACTTCAAGAAAATCCGCAGCATAGCGAAGGTGGCGGGAACGGTGGTGACGATCGGAGGAGCCATGGTGATGACTCTATACAAAGGGCCAATCGTGGAGATCTTCCACGGCGCGGGGCGGCACGCGGCCCACCAGAGCAGCAGCGAGTCCGCGGACCAGCACTGGGTCCTCGGCACCCTCATGCTCCTCGGCAGCATCATCGGCTGGTCCGGCTTCTTCATCTTGCAATCCTTCACCCTCAAGAAGTACCCTGCTGAGCTGTCCCTCACCGCCCTCATCTGCCTAGCTGGCACCCTCGAAGGCTCCATCGTCACCCTCATCATGGAGCGCGATTTCTCCGTCTGGGTCATCGGCTGGGACTCCCGCCTCCTCGCCGCCGTCTACACTGGTGTCATTTGCTCTGGGCTTGCGTATTACATACAAGGCGTGGTGATCCGCCAACGTGGCCCGGTTTTCGTTACCTCTTTTACCCCTCTATGCATGATCATCACCGCCATCCTCGGCTCCATTGTGTTGGCTGAACAAATCCACCTCGGAAGTATAATTGGAGCCGTTTTCATAGTGATGGGGCTGTACTTGGTGGTGTGGGGCAAGGCCAGGGACCATCTCAATTCGTTGATGAATCAGAAAGGCGCCGCCGCCGCCACCCAATTGCCGATCACCGCCGAGCCGGAGACCAATTCCGCCGCCAAGGCTCCGCCGGCCTGA 1113 54.63 MGAETGLAMFCGAIHKIKPYLAMVSLQFGYAGMYIVTLLCFKKGMSHYVLAVYRHVVATIVISPFALVLERKIRPKLTLPIILRIMLLGFLEPVLDQNLYYVGLKFTSATFTSVTLNILPAVTFIMALIFRLESVNFKKIRSIAKVAGTVVTIGGAMVMTLYKGPIVEIFHGAGRHAAHQSSSESADQHWVLGTLMLLGSIIGWSGFFILQSFTLKKYPAELSLTALICLAGTLEGSIVTLIMERDFSVWVIGWDSRLLAAVYTGVICSGLAYYIQGVVIRQRGPVFVTSFTPLCMIITAILGSIVLAEQIHLGSIIGAVFIVMGLYLVVWGKARDHLNSLMNQKGAAAATQLPITAEPETNSAAKAPPA 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5557448 5560490 + MC11g0692 Mch11g0824 679758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0824 370 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020(InterPro)
Mch11g0824 370 Pfam EamA-like transporter family 27 146 IPR000620 GO:0016020(InterPro)
Mch11g0824 370 PANTHER WAT1-RELATED PROTEIN 21 343 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Mch11g0824 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 335 - -
Mch11g0824 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0824 Mch-Chr11:5557448 Mch4g1762 Mch-Chr4:20633828 7.02E-146 dispersed
Mch11g0824 Mch-Chr11:5557448 Mch4g1761 Mch-Chr4:20627065 3.60E-136 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0824 - - - 0.0