Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0839 ATGGCGGAGCAGAAAGCGGTGTTCGACGGAGAAGCGGCGGAGAGAACGGCGGCGGAGCTGAGGGAGAGTTACAATTCCGGCAAGACACGGAGGTACGAGTGGAGAGTGACGCAACTGAAGAATTTGTGCAGATTGATGGATGAAAACGAGAGCGCAATCATCGACGCCATCCATTCGGATCTTTCCAAACCCGAGTTCGAAGCCTTTGCTCATGAGAGTAACGTCCATTCCAGCGGCAAGGCGTGGACAGAAAGGAAAACGCCCCATACCGCATACGCAGCGCGTGGGGTAGACGCGCTTTCTTGTATGCTGATGGAGAGAATCGCTGAGCTGTGTGATGGCGAATGCGGAATTGTGCAGTATACGAGAGTGTGA 375 54.13 MAEQKAVFDGEAAERTAAELRESYNSGKTRRYEWRVTQLKNLCRLMDENESAIIDAIHSDLSKPEFEAFAHESNVHSSGKAWTERKTPHTAYAARGVDALSCMLMERIAELCDGECGIVQYTRV 124
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5686214 5688419 + MC11g_new0134 Mch11g0839 679773

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0839 124 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 4 111 IPR016162 GO:0016491(InterPro)
Mch11g0839 124 PANTHER ALDEHYDE DEHYDROGENASE 12 76 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(PANTHER)|GO:0006081(InterPro)
Mch11g0839 124 SUPERFAMILY ALDH-like 12 70 IPR016161 GO:0016491(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0839 K00128 - - csv:101219329 94.7449
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0839 Mch-Chr11:5686214 Mch11g0840 Mch-Chr11:5688620 9.77E-13 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g247 . Blo12g01125 . Bda03g00014 . Bpe04g00009 Bma04g00013 . . . Cma01g01383 Cma09g00785 . . . Cpe06g00619 . . . . . . . . . . . . . . . Cone4ag1417 Cone7ag1521 . . Lsi04g02401 Csa04g01789 . . . . . . . . . . . Cmo01g01433 Cmo09g00776 . . . Car09g00694 . Cpe02g00556 Bhi09g02693 . . . Hepe01g2295 Mch11g0839 . Cla11g01542 Cam11g1605 Cec11g1633 Cco11g1636 Clacu11g1762 Cmu11g1578 Cre11g1996 . . Chy07g00628 Cme07g00835