Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0840 ATGTCGGAGGAGGAGGTGTTCGACGCGGCGGTGGCGGTGAAGGAGCTGAGAGGTAGTTTTGCCTCCGGCAAGACTAGGAGCTACGAATGGAGAGTGTCGCAGCTTCAGAGCCTCCATAAGCTCTGCGTTGACCATGAGGAAGATATCTGTGATGCGCTTCGCTCCGACCTCTCCAAGCCTGTTTTGGAATCCATCGTTCACGAGATAGCTATGGTAAAAAATGCGTGTAAATTGGCACTTAAAGAACTCAAGCGTTGGATGACACCAGAAAAGGTTAAAACTTCAGTGACCACATTTCCTTCGTCTGCTGCAATTGTACCAGAACCATTGGGTGTTGTTCTTATCATTTCTGCTTGGAATTATCCATTTTTATTATCACTTGATCCAGTTGTTGGAGCAATTGCAGCTGGTAATACTGTGGTTCTAAAGCCGTCAGAAATCTCTCCAGCAACATCATCTTTAATGGCAAAGCTTGTAGGGAAATATTTGGATACCTCTTGTGTAAAAGTTGTTGAGGGTGCTGTTTCTGAAACTTCCGCTTTGCTGGAGCAAAAGTGGGACAAGATATTTTACACAGGCAATGGAAGAGTGGCACGTATAGTGATGGCTGCTGCTGCTAAGCACCTTACACCAGTTGTTTTAGAGCTTGGAGGAAAGTCTCCAGTAGTAGTTGATTCAGGAATCAATTTACAGGTTGCATGTAGGCGGATTATTGTTGGTAAGTGGGGTTGTAACAATGGACAAGCATGCATTGCTCCTGACTATATCATAACTACGAAAGAATTTGCTCCAAAATTGGTGGAGTCTCTGAAACAAGAACTGGAGATATTTTATGGAAAGAATCAGCTGGAATCCAAAGATTTGTCTCGCATTGTGAATGCTAACCACTTTGATCGCTTGTCAAAGCTCTTAGCTGATGATAAAGTTTCTGACAAGATTGTGCATGGAGGTGAAAAGGACAAAAGCAAATTACAGATTTCTCCCACCATCTTACTGGATGTCCCTCGAGACTCTCTGATTATGACGGAGGAAATCTTTGGTCCCTTACTTCCCATTCTCACGGTTGACAAAGTGGAGGACAGCTTCGAAATAGTGAACTCGGGCACAAAGCCACTTGCGGCGTATTTATTTACCAACAACAAAAAGCTCAAGGAACGGTTTGTGGCTTGTATCTCTGCAGGGGGTGTGGTTATCAATGACACCACCTTACATCTCACTGTTGAGACACTACCATTTGGAGGAGTTGGAGAGAGTGGAATGGGAGCCTACCATGGGAAGTTCTCTTTTGATGCATTTACCCATAAGAAGGCTGTCCTTTATCGGAGTTTCGCAGGCGATGCACCGATTAGATACCCGCCATACACAAAGGGAAAGTTGAGAATTCTCAAGGCTCTTATTGGTGGTGGCATACTGGGAATCATTCGAGCTCTGCTTGGATGGTAA 1443 44.56 MSEEEVFDAAVAVKELRGSFASGKTRSYEWRVSQLQSLHKLCVDHEEDICDALRSDLSKPVLESIVHEIAMVKNACKLALKELKRWMTPEKVKTSVTTFPSSAAIVPEPLGVVLIISAWNYPFLLSLDPVVGAIAAGNTVVLKPSEISPATSSLMAKLVGKYLDTSCVKVVEGAVSETSALLEQKWDKIFYTGNGRVARIVMAAAAKHLTPVVLELGGKSPVVVDSGINLQVACRRIIVGKWGCNNGQACIAPDYIITTKEFAPKLVESLKQELEIFYGKNQLESKDLSRIVNANHFDRLSKLLADDKVSDKIVHGGEKDKSKLQISPTILLDVPRDSLIMTEEIFGPLLPILTVDKVEDSFEIVNSGTKPLAAYLFTNNKKLKERFVACISAGGVVINDTTLHLTVETLPFGGVGESGMGAYHGKFSFDAFTHKKAVLYRSFAGDAPIRYPPYTKGKLRILKALIGGGILGIIRALLGW 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5688620 5693845 + MC11g0706 Mch11g0840 679774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0840 480 Pfam Aldehyde dehydrogenase family 8 438 IPR015590 GO:0016491(InterPro)
Mch11g0840 480 FunFam Aldehyde dehydrogenase 17 222 - -
Mch11g0840 480 PIRSF ALDH 1 470 IPR012394 GO:0006081(InterPro)
Mch11g0840 480 SUPERFAMILY ALDH-like 8 453 IPR016161 GO:0016491(InterPro)
Mch11g0840 480 FunFam Aldehyde dehydrogenase 218 418 - -
Mch11g0840 480 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 18 436 IPR016162 GO:0016491(InterPro)
Mch11g0840 480 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 218 418 IPR016163 GO:0016620(InterPro)
Mch11g0840 480 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 214 221 IPR029510 GO:0016491(InterPro)
Mch11g0840 480 PANTHER ALDEHYDE DEHYDROGENASE 11 478 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(PANTHER)|GO:0006081(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0840 Mch-Chr11:5688620 Mch2g0136 Mch-Chr2:1031996 1.48E-150 dispersed
Mch11g0839 Mch-Chr11:5686214 Mch11g0840 Mch-Chr11:5688620 9.77E-13 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0840 K00128 - csv:101219569 779.63