Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0853 ATGTTGAAGCCGAAGACCTTCGCCGGAGCCAACGTGTTCATGTCTCGCAATCTTGTTGCTCCGGAGATATTCGACGCTGTCCACGATGCTCTGAAGCAGAATGGGGCTGAGGTCTTCCTCTGCTGCGATCCCTCACGAAACGGGCCTAACGATTATCACGTTATATCCTCCGCCGATCATGAAAAGTTTGAGGATCTTCGAGCGAAGGGATGCAATTTGCTAGGTCCTCAGTGCGTGCTTTCATGTGCAAAGGAGCACAGACCTCTTCCTCAACAGGGTTTTACTTGTTGCCTTGCAATGGATGGTGTGAAAATTCTGGCATCTGGTTTCCAGGCAGATGAAAAGGTTGAGATAGGGAAGTTAGTTACTGCAATGGGAGGAGTATTGCATACTAAAGCATCTCTAGATGTCAGCTTTGTCATTGTGAAGAATGTTTTGGCTGCAAAATACAAGTGGGCACTAAACATTTCAAAGAAACCAATTGTCACAATTGGTTGGTTACAACAGTGCTGGATTGAGCATCGTGTAGTGCCTCAGGAGGCATATCGAGTTCTTCCATTTTCTGGATTGAATATTTCTGTATCTAGAATTCCAGCAGGTAATGAGCGCAAGGAGATCGAAAAGCTTATCTTGCAAAATGGTGGAAGATATTGTGCTGATCTTACGAGAAAGTGTACACATTTGATATCTCCTGAAGGTGACAAGTACAAGGTTGCACGAACATGGGGCCATATCAATATTGTTACTCGGAAATGGTTTGATCAATCCGTAGCTAGAAGAGCATGTCTTAATGAGGAGTCATATCCTGTTGGTAGCGTTGGAGCTTCAAATAAGATGGCAAGGGGTTGCTTGACTGCTCAAAATAGCCAAGACAAGGTTATGGGGAACTTGCAAGCTGCACCATCCTCATTGGTTGCCGATTCAAATTTCTCAGCAGTCTCTGGTCCAGGGTTTTCAGATATGGATTTAGAGCCTTCCTTGTCACAGAATACTTCTATGTTTTCAGATGCTACTCATTGTATAAATGAGGTTGATGTTGAAGTGCCTGTTACGACAGCAAAGACTGAAACATACAGTAATAATTGTATTACGAGTGACTTCCAATCTGAAGACAATGACCTGTATTTATCAGCATGTAGAATAAAAGTTGTTGGGTTCGAAGCCTCTGAGTTGCGCAAGATTGTCAATATGATTCGCGGAGGTGGAGGCTCCCGATTTATCCTGTCCAACAACAAGTTAACACACATAATAGTTGGAAATCTGTCAGAAATGGAGAAAAAAGAGGTAAGAGATATTGCAGCTTCAGGTGTCATCCATGTGGTTAGAACCACCTGGCTTGAGGATTGTGATCGTCAGAAGAAGGAGATCCCTGTTCTTGGTAGACACATGGCCTATGATGCACTTATCCCTAAAGCATCCAGTAAAGCAAGCACCATCGATATGGATCAGAATAAAGTTCCAATTGTTCATCCAACCATACCATCAAATGAGTTAGAAGGAAGTATTCAAGTTAGAATTGGTAAGCCATCAATGATAGAGGAAAAAATTGAAGAAAAAAGTGAAGCAAATGTGAGTGGAGACAGGACCATGAAATTACCCCAGAAAAGGCAACCTCCTGTATCAAATGGTATAAACAAGAGTCAAGAAAAGATGCGGCCTGATTTCACTGTTCAAAATGGGAAGTCATCATGTGTGTTTAAGGGGAAAATATTTTGCTTTTCAAGTTCCTTTCCAGAAGATCGGAGAGCTGAAATTGTTGAATGGATAAATCAAGGGGGAGGGAAGGTTGTTGAGGATCATATGAAACAGAAAGTGCACTTCACGGTTGAATGTCATGGTGTTACACTAAGGAGTTCGAGCATTCAAACTATATATGTGTCGAGTCATTGGGTTCGATCATGTTTAGAGGATGGATGCTTGTGGGATACCAATGGACACATTCTCTATTCTCCACTTCCTTGTTGTGTTCCTTTGTCTGGATTTGAAAATATTCGGTTCTGTGTTTCACAATATGGAGATAAAGATAGAGTATTGTTAAGAAATCTGTGTTTTGTACTTGGGGCCAAGTTTGTGGAGAAGTTGACTAAGAAGGTAACCCACCTAATATGCAAATTTTCCAATGGGCCAAAGTATGAGGCTGCTTGTAAATGGGGAATACATTCAACTACAGCTGAATGGATATACGAGTGTGTTAGACAGAGTAAGATTGTTTCTCTTGATTTGTATCGTCCAAAAGAAGTTACAGCTCAAGACACAGAGGCAGGGTTATGCACTGTTAGTCAGTTTCCTACACAAGCTGTCCAAATGATAGCTAGAGAAAGTCAATCCCAGTTCCCAATACATTCTGCCATCCAGAATGACCAATCAGCTGGAACCATCGGTAGTTCTATGGGAGAGGTCAAACAACTAAGCTATATTAATAAAAAGCCCAAGCTTCTTGACGAAGCTAAACAGAAGTGTCCACTTTTTGTTGGAAATAGTCTCACTCACTCTGATTGCAATTTGAACTCCACCAAAGAAACTACATCAAAATCTTCTGTAGTAACTTCACATGTTCCTGATGTTGCTTCTGCAATTGAGGACTTGTTGGAGCAGACAAGTAAGATTCATGACCTGAAGTCACCTGGAAGGAAGGACTGCAATAAAAGTATTTTCCCGTCTGACTGTTCCATCGTTGGTCAAGACCAGGACCATTCAGAATCTCATCCAATTATTGGTTTATCTAACCCGTGGTTAAAAAGAACTGAGAGAAAAGAAGAAATTGGCAATCCTACTGGGGATGGAAGGGCAGGCATATATGATGGTTTTAGTGAAACGCAAACTGAGTCTCAGGTTGTGGGTTATGAAGAAGATTTATCGGGAAGGCAAATGCTGATAGACAGAGTTAGAACCTGGAGTAGCACGACTTGA 2910 41.72 MLKPKTFAGANVFMSRNLVAPEIFDAVHDALKQNGAEVFLCCDPSRNGPNDYHVISSADHEKFEDLRAKGCNLLGPQCVLSCAKEHRPLPQQGFTCCLAMDGVKILASGFQADEKVEIGKLVTAMGGVLHTKASLDVSFVIVKNVLAAKYKWALNISKKPIVTIGWLQQCWIEHRVVPQEAYRVLPFSGLNISVSRIPAGNERKEIEKLILQNGGRYCADLTRKCTHLISPEGDKYKVARTWGHINIVTRKWFDQSVARRACLNEESYPVGSVGASNKMARGCLTAQNSQDKVMGNLQAAPSSLVADSNFSAVSGPGFSDMDLEPSLSQNTSMFSDATHCINEVDVEVPVTTAKTETYSNNCITSDFQSEDNDLYLSACRIKVVGFEASELRKIVNMIRGGGGSRFILSNNKLTHIIVGNLSEMEKKEVRDIAASGVIHVVRTTWLEDCDRQKKEIPVLGRHMAYDALIPKASSKASTIDMDQNKVPIVHPTIPSNELEGSIQVRIGKPSMIEEKIEEKSEANVSGDRTMKLPQKRQPPVSNGINKSQEKMRPDFTVQNGKSSCVFKGKIFCFSSSFPEDRRAEIVEWINQGGGKVVEDHMKQKVHFTVECHGVTLRSSSIQTIYVSSHWVRSCLEDGCLWDTNGHILYSPLPCCVPLSGFENIRFCVSQYGDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFSNGPKYEAACKWGIHSTTAEWIYECVRQSKIVSLDLYRPKEVTAQDTEAGLCTVSQFPTQAVQMIARESQSQFPIHSAIQNDQSAGTIGSSMGEVKQLSYINKKPKLLDEAKQKCPLFVGNSLTHSDCNLNSTKETTSKSSVVTSHVPDVASAIEDLLEQTSKIHDLKSPGRKDCNKSIFPSDCSIVGQDQDHSESHPIIGLSNPWLKRTERKEEIGNPTGDGRAGIYDGFSETQTESQVVGYEEDLSGRQMLIDRVRTWSSTT 969
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5813129 5824503 - MC11g0718 Mch11g0853 679787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0853 969 SUPERFAMILY BRCT domain 565 650 IPR036420 -
Mch11g0853 969 SMART BRCT_7 563 638 IPR001357 -
Mch11g0853 969 SMART BRCT_7 658 734 IPR001357 -
Mch11g0853 969 SMART BRCT_7 373 453 IPR001357 -
Mch11g0853 969 SMART BRCT_7 97 174 IPR001357 -
Mch11g0853 969 SMART BRCT_7 184 260 IPR001357 -
Mch11g0853 969 Gene3D BRCT domain 186 270 IPR036420 -
Mch11g0853 969 ProSiteProfiles BRCT domain profile. 100 184 IPR001357 -
Mch11g0853 969 Pfam twin BRCT domain 665 726 IPR001357 -
Mch11g0853 969 Pfam twin BRCT domain 191 252 IPR001357 -
Mch11g0853 969 Pfam twin BRCT domain 103 166 IPR001357 -
Mch11g0853 969 SUPERFAMILY BRCT domain 57 184 IPR036420 -
Mch11g0853 969 CDD BRCT 103 170 - -
Mch11g0853 969 Pfam BRCA1 C Terminus (BRCT) domain 565 609 IPR001357 -
Mch11g0853 969 CDD BRCT_TopBP1_rpt2_like 661 734 - -
Mch11g0853 969 ProSiteProfiles BRCT domain profile. 661 744 IPR001357 -
Mch11g0853 969 Gene3D BRCT domain 353 459 IPR036420 -
Mch11g0853 969 SUPERFAMILY BRCT domain 373 457 IPR036420 -
Mch11g0853 969 Gene3D BRCT domain 558 654 IPR036420 -
Mch11g0853 969 FunFam Transcription coactivator 558 654 - -
Mch11g0853 969 Gene3D BRCT domain 97 185 IPR036420 -
Mch11g0853 969 Gene3D BRCT domain 661 753 IPR036420 -
Mch11g0853 969 SUPERFAMILY BRCT domain 624 745 IPR036420 -
Mch11g0853 969 FunFam Transcription coactivator 97 185 - -
Mch11g0853 969 ProSiteProfiles BRCT domain profile. 561 648 IPR001357 -
Mch11g0853 969 MobiDBLite consensus disorder prediction 517 547 - -
Mch11g0853 969 Gene3D BRCT domain 31 94 IPR036420 -
Mch11g0853 969 CDD BRCT_TopBP1_rpt2_like 186 260 - -
Mch11g0853 969 FunFam Transcription coactivator 36 94 - -
Mch11g0853 969 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 23 966 - GO:0006270(PANTHER)|GO:0007095(PANTHER)|GO:0033314(PANTHER)
Mch11g0853 969 ProSiteProfiles BRCT domain profile. 371 463 IPR001357 -
Mch11g0853 969 FunFam Transcription coactivator 353 463 - -
Mch11g0853 969 ProSiteProfiles BRCT domain profile. 182 270 IPR001357 -
Mch11g0853 969 SUPERFAMILY BRCT domain 186 271 IPR036420 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0853 K10728 - csv:101212525 1518.06