Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0857 ATGCAGTTATATCATCATCCATACTCATTGGACAGCCAAAAGGTGAGGCTTGCCTTGGAAGAGCAAGGCATTGATTATACGTCGTATCATGTCAATCCTATCACGGCCAAGAACATGGACTCATCATTCTTCAAGATGAATCAAAGTGCAAAACTTCCCGTGTTTAAAAATGGTTCGCACATCATTTTTGACACCATCGAGATAATTCAGTATATAGAGAGAATTGCAGTTGTTTCCTCAGGGACCAATAATATAATACTGAGCAGCGGAGAAGTTGTGGAATTGATGCATAAGATACAAGAATGGAATCCGAAATTCTTTACGCTTGCCCACATCCCCGAGAAGTACCGCCTTTCGGTTACAAAATTTATAAGGCGGGTGGTGATTGCTCGGATGGCTGAAACTCCCGAAATGGCTGCTGCATACCATCGTAAGCTGCGAGAAGCGTACGAGACCGAAGACGAATTGAAAAACAAAACTGTTGTCAAACAGAGCACTGAACATCTAATCAGACTTCTCGACGAAATCGAATTGAGACTAGGCGAGACTGCATACTTGGCAGGGGAAGAGTTCACGATGGCAGATGCTGTGTTCATCCCTGTGCTGGCTCGACTCGTGGTGTTGAATGTAGCGGACGAGTATATAGGCAGCAGACCGAACATCGGTGAGTATTGGATCTTGGTGCAGCAGAGGCCAAGCTATAAGAAGGTGATTGGGAAGTACTTCAAGGGGTGGAGAAAGCACAAAACTCTTCTGAAAACATGGTTCTTTGTTCATGTGAGAACCTTGCTGAGGAGATATTGA 804 44.4 MQLYHHPYSLDSQKVRLALEEQGIDYTSYHVNPITAKNMDSSFFKMNQSAKLPVFKNGSHIIFDTIEIIQYIERIAVVSSGTNNIILSSGEVVELMHKIQEWNPKFFTLAHIPEKYRLSVTKFIRRVVIARMAETPEMAAAYHRKLREAYETEDELKNKTVVKQSTEHLIRLLDEIELRLGETAYLAGEEFTMADAVFIPVLARLVVLNVADEYIGSRPNIGEYWILVQQRPSYKKVIGKYFKGWRKHKTLLKTWFFVHVRTLLRRY 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5837257 5840221 - MC11g0722 Mch11g0857 679791

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0857 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 118 251 IPR010987 -
Mch11g0857 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364(InterPro)
Mch11g0857 267 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Mch11g0857 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Mch11g0857 267 Coils Coil 139 159 - -
Mch11g0857 267 CDD GST_N_family 1 73 - -
Mch11g0857 267 Gene3D Glutaredoxin 1 75 - -
Mch11g0857 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Mch11g0857 267 SUPERFAMILY GST C-terminal domain-like 137 242 IPR036282 -
Mch11g0857 267 Gene3D - 117 238 - -
Mch11g0857 267 Pfam Glutathione S-transferase, C-terminal domain 163 210 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0857 K22077 - - csv:101222476 475.707
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g160 . . . . . . . . . . . Cma09g00083 . . . Cpe06g00047 . . . . . . . . . . . . . . . . . . . Lsi04g01780 . Chy04g00390 . . Blo18g00762 . Bda01g01547 Bpe02g01743 . Bma01g00715 . Sed12g1477 . Cmo09g00082 . . . Car09g00072 . Cpe02g00582 Bhi09g02717 Tan01g4064 Cmetu07g2081 . . Mch11g0857 . Cla05g01596 Cam05g1707 Cec05g1707 Cco05g1763 Clacu05g1694 Cmu05g1583 Cre05g1701 . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Mch9g0763 . 1 209 Glutathione S-transferase Gene Family AT4G02520 54.2 3.3e-60 228.4
Mch9g0762 . 6 213 Glutathione S-transferase Gene Family AT4G02520 55.5 6.2e-59 224.2
Mch9g0763 . 1 210 Glutathione S-transferase Gene Family AT2G02930 55.1 1.3e-61 233.0
Mch9g0762 . 6 214 Glutathione S-transferase Gene Family AT2G02930 56.1 8.7e-61 230.3
Mch9g0762 . 9 210 Glutathione S-transferase Gene Family AT1G02950 53.7 1.1e-57 220.3
Mch9g0763 . 5 206 Glutathione S-transferase Gene Family AT1G02950 52.2 1.3e-55 213.4
Mch9g0762 . 6 214 Glutathione S-transferase Gene Family AT1G02930 53.6 1.9e-60 229.2
Mch9g0763 . 1 210 Glutathione S-transferase Gene Family AT1G02930 52.9 1.0e-58 223.4
Mch9g0762 . 6 214 Glutathione S-transferase Gene Family AT1G02920 54.5 2.7e-62 235.3
Mch9g0763 . 1 210 Glutathione S-transferase Gene Family AT1G02920 52.4 1.8e-58 222.6
Mch9g0763 . 1 215 Glutathione S-transferase Gene Family AT2G47730 56.5 1.2e-64 243.4
Mch9g0762 . 6 220 Glutathione S-transferase Gene Family AT2G47730 57.9 3.0e-63 238.8
Mch1g0661 . 174 314 Glutathione S-transferase Gene Family AT2G29490 53.2 1.4e-37 153.3
Mch1g0661 . 174 314 Glutathione S-transferase Gene Family AT2G29480 51.8 1.1e-37 153.7
Mch1g0661 . 174 314 Glutathione S-transferase Gene Family AT2G29460 52.1 5.4e-37 151.4
Mch1g0661 . 174 313 Glutathione S-transferase Gene Family AT2G29450 55.3 5.4e-37 151.4
Mch10g1004 . 108 265 Glutathione S-transferase Gene Family AT2G29420 52.5 1.5e-42 169.9
Mch1g0660 . 3 199 Glutathione S-transferase Gene Family AT3G09270 52.3 3.9e-59 224.9
Mch1g0661 . 174 314 Glutathione S-transferase Gene Family AT3G09270 58.0 1.5e-42 169.9
Mch10g1005 . 18 231 Glutathione S-transferase Gene Family AT1G78380 71.5 4.1e-90 327.8
Mch10g1004 . 107 287 Glutathione S-transferase Gene Family AT1G78380 74.6 2.1e-78 288.9
Mch4g1663 . 4 221 Glutathione S-transferase Gene Family AT1G78380 53.2 5.1e-64 241.1
Mch10g1005 . 22 229 Glutathione S-transferase Gene Family AT1G78370 64.4 7.7e-81 297.0
Mch10g1004 . 111 287 Glutathione S-transferase Gene Family AT1G78370 67.2 8.0e-70 260.4
Mch4g1663 . 7 220 Glutathione S-transferase Gene Family AT1G78370 52.3 2.3e-61 232.3
Mch10g1005 . 15 229 Glutathione S-transferase Gene Family AT1G78340 63.7 5.6e-79 290.8
Mch10g1004 . 104 287 Glutathione S-transferase Gene Family AT1G78340 67.9 4.6e-73 271.2
Mch4g1663 . 4 219 Glutathione S-transferase Gene Family AT1G78340 51.4 5.8e-60 227.6
Mch5g0151 . 1 171 Glutathione S-transferase Gene Family AT1G78340 50.6 2.0e-44 176.0
Mch10g1005 . 19 229 Glutathione S-transferase Gene Family AT1G78320 54.0 6.7e-60 227.3
Mch10g1004 . 108 287 Glutathione S-transferase Gene Family AT1G78320 55.0 1.1e-51 199.9
Mch10g1005 . 15 233 Glutathione S-transferase Gene Family AT1G17180 67.6 3.9e-88 321.2
Mch10g1004 . 104 287 Glutathione S-transferase Gene Family AT1G17180 71.2 3.1e-77 285.0
Mch4g1663 . 4 224 Glutathione S-transferase Gene Family AT1G17180 52.5 2.3e-64 242.3
Mch10g1005 . 15 232 Glutathione S-transferase Gene Family AT1G17190 57.3 2.4e-74 275.4
Mch10g1004 . 104 286 Glutathione S-transferase Gene Family AT1G17190 61.7 2.4e-66 248.8
Mch10g1005 . 15 226 Glutathione S-transferase Gene Family AT3G43800 53.7 2.3e-67 252.3
Mch10g1004 . 104 288 Glutathione S-transferase Gene Family AT3G43800 54.5 1.9e-58 222.6
Mch10g1005 . 17 233 Glutathione S-transferase Gene Family AT1G53680 55.3 1.5e-66 249.6
Mch4g1663 . 1 224 Glutathione S-transferase Gene Family AT1G53680 53.1 7.0e-61 230.7
Mch10g1004 . 106 287 Glutathione S-transferase Gene Family AT1G53680 58.2 1.6e-57 219.5
Mch2g1538 . 63 233 Glutathione S-transferase Gene Family AT2G02390 66.1 1.9e-62 235.7
Mch2g1536 . 46 216 Glutathione S-transferase Gene Family AT2G02390 63.7 2.5e-59 225.3
Mch5g0313 . 62 228 Glutathione S-transferase Gene Family AT2G02390 52.7 9.0e-49 190.3
Mch2g1538 . 22 232 Glutathione S-transferase Gene Family AT2G02380 63.5 2.0e-76 282.3
Mch2g1536 . 2 214 Glutathione S-transferase Gene Family AT2G02380 58.7 2.6e-71 265.4
Mch5g0313 . 19 227 Glutathione S-transferase Gene Family AT2G02380 54.1 6.3e-62 234.2
Mch10g0828 . 1 237 Glutathione S-transferase Gene Family AT5G41210 70.5 1.6e-95 345.9
Mch10g0828 . 1 237 Glutathione S-transferase Gene Family AT5G41240 69.2 4.1e-92 335.9
Mch5g1798 . 3 237 Glutathione S-transferase Gene Family AT5G02780 67.4 1.6e-87 319.3
Mch5g1796 . 9 228 Glutathione S-transferase Gene Family AT5G02780 69.4 3.7e-84 308.1
Mch9g1619 . 76 295 Glutathione S-transferase Gene Family AT5G02780 66.7 4.9e-81 297.7
Mch9g1619 . 29 296 Glutathione S-transferase Gene Family AT3G55040 59.1 8.5e-83 303.9
Mch5g1798 . 7 238 Glutathione S-transferase Gene Family AT3G55040 59.1 4.1e-77 285.0
Mch5g1796 . 1 226 Glutathione S-transferase Gene Family AT3G55040 55.9 1.5e-71 266.5
Mch5g1798 . 4 237 Glutathione S-transferase Gene Family AT5G02790 68.4 9.5e-93 336.7
Mch5g1796 . 3 228 Glutathione S-transferase Gene Family AT5G02790 68.3 9.2e-88 320.1
Mch9g1619 . 70 295 Glutathione S-transferase Gene Family AT5G02790 63.4 3.8e-81 298.1
Mch9g1596 . 1 213 Glutathione S-transferase Gene Family AT1G19570 70.1 3.0e-85 311.6
Mch9g1595 . 1 211 Glutathione S-transferase Gene Family AT1G19570 67.9 3.1e-82 301.6
Mch8g2308 . 64 272 Glutathione S-transferase Gene Family AT1G19570 60.0 2.4e-71 265.4
Mch9g1595 . 1 212 Glutathione S-transferase Gene Family AT1G75270 72.8 9.9e-89 323.2
Mch9g1596 . 1 212 Glutathione S-transferase Gene Family AT1G75270 72.3 2.7e-86 315.1
Mch8g2308 . 64 272 Glutathione S-transferase Gene Family AT1G75270 62.4 3.4e-73 271.6
Mch8g2308 . 5 275 Glutathione S-transferase Gene Family AT5G16710 67.4 8.0e-101 363.6
Mch9g1595 . 3 210 Glutathione S-transferase Gene Family AT5G16710 59.6 5.4e-73 271.2
Mch9g1596 . 3 211 Glutathione S-transferase Gene Family AT5G16710 58.6 5.6e-70 261.2
Mch11g0857 . 1 268 Glutathione S-transferase Gene Family AT1G77290 68.3 4.2e-105 377.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005962 2 5 1 1 1 0 2 0 0 1 1 1 2 1 1 2 0 1 2 0 1 1 1 1 1 1 1 1 2 1 35