Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0858 ATGGCGGCAGCGGTCGGAGGAGGTAACGGAGGTGGTGGAGATGTGTCGAGGGCGCACGCGGCTATGGCTTTGGTGCAGTTGATCAATGGAGGGTACCATGTTATTACCAAAGTCGCCCTCAATATTGGGATGAACCAGCTCGTGTTTTGTTTGTTCCGCGACTTGTTGGCGCTCGCGATTCTTGCCCCTGTTGCTTATGTCCGGGAGAAGCGGGTTCGTTTGCCTATGACTCGAGACCTCTTCGTATCGTTCTTTATTCTTGGTTTAACGGGGATTTTTGGGAACCAGCTTCTCTTTCTTGTTGGACTGGGTTACACTAATCCAACTTATGCTGCTGCCATACAGCCTGCCATTCCAGTTTTTACATTCCTTTTTGCTGTTATGATGGGCACAGAGACTGTGAACTTCCTTAAACTTGAAGGACAGGCTAAGGTTGGAGGTACACTTGTTTGTGTCGCTGGTGCCATATTGATGGTTTTATTCCGTGGTCCAGCTTTGGTTGGAAACAGTGAACATGACTTCAACTCGCATAACGAGATAAGTGCGAGGGGTCAGCCAGAGCCTGCTGGATGGCTAATGTCTAGCTTTCTGGAGTATGGCCTCGATTATTTTCACATTGGGGTTTTATGCTTGATAGGAAACTGTATGTGCATGGCAGCTTTCTTGGCCATCCAGGCACGGGTGTTAAAGAAGTATCCTGCCAACTTATCTGTCACAGCATATTCTTATTTATTTGGTGCTATATTGATGGTGATCACGTCTTTCTTCATGACCAACGAATCCACAGACTGGAATTTGACGCAATCAGAGTTTTTTGCTGTCCTTTATGCTGGAATTTTTGCATCTGCAATCAATTATGGACTCCTGACATGGTGCAATAAAATATTGGGGCCTGCTTTGGTCGCTCTTTACAACCCACTTCAACCTGCGGCTTCTGCACTTCTATCAAGAGTTTTCATCGGAAGCCCTATTTATCTTGGAAGTGTTCTAGGGGGGTCTCTAATTATTGCTGGTCTTTATTTGGTGACTTGGGCGTCGCATAGTGAGCGACAAGCGACTCTGGTTTTGCTACCTCATTCAAGCAGGTCCTCTGAGCCACTTATTCACAAAGATGCTCCATTGACTAACAAGTTTGCATATCAGATAGGACACATGTTCTCGGGGTCTGCTTCATCACCAAAATCTGTAGATTAG 1194 46.15 MAAAVGGGNGGGGDVSRAHAAMALVQLINGGYHVITKVALNIGMNQLVFCLFRDLLALAILAPVAYVREKRVRLPMTRDLFVSFFILGLTGIFGNQLLFLVGLGYTNPTYAAAIQPAIPVFTFLFAVMMGTETVNFLKLEGQAKVGGTLVCVAGAILMVLFRGPALVGNSEHDFNSHNEISARGQPEPAGWLMSSFLEYGLDYFHIGVLCLIGNCMCMAAFLAIQARVLKKYPANLSVTAYSYLFGAILMVITSFFMTNESTDWNLTQSEFFAVLYAGIFASAINYGLLTWCNKILGPALVALYNPLQPAASALLSRVFIGSPIYLGSVLGGSLIIAGLYLVTWASHSERQATLVLLPHSSRSSEPLIHKDAPLTNKFAYQIGHMFSGSASSPKSVD 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5841995 5846186 - MC11g0723 Mch11g0858 679792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0858 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 162 - -
Mch11g0858 397 PANTHER WAT1-RELATED PROTEIN 20 358 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Mch11g0858 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 348 - -
Mch11g0858 397 Pfam EamA-like transporter family 206 343 IPR000620 GO:0016020(InterPro)
Mch11g0858 397 Pfam EamA-like transporter family 21 158 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0858 Mch-Chr11:5841995 Mch6g0404 Mch-Chr6:2667078 1.22E-70 dispersed
Mch11g0858 Mch-Chr11:5841995 Mch8g0813 Mch-Chr8:5723787 1.17E-72 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0858 - - - 0.0