Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0927 TTCATTAGCATTGACTGTGGAGTTTCAAAGAATTCTAGCTACACAGACAGAGTAACAGGCATAAAGTACACTTCTGATGCATACTTCACGGAAACTGGTATAAATAAGAGCATATCATCTGATTTCAACACAACCACTCTTCCACAGCAATTCTGGTATGTTAGAAGCTTTCCTGAAGGAGATAGGAACTGTTACATCATAAAGCTTGCTCAAGGAAAAGGTTACAAGTATTTGATCAGAGCGAGTTTCATGTACGGAAACTATGATGGCCAAGGTAAAGCACCGGCTTTTGATTTGTACATGGGAGTTAATAAGTGGGATTCAGTAGTATTGAACAATGAATCCAGTATCATAATCAAAGAAGTCATACATGCACTTCCTACATCTTCCATAAACATATGTCTGGTGAATACTGGCTTTGGTTCACCTTTTATATCAGCATTGGAGCTCAAGCTTTTGAAAAATGCTACTTACATGACCAATTTCGAATTAAACGGGAACTTTACCAAATGTGCTCTTAATGTCTGTGTTGTCTCTCTCAGGTACAGTGATGATGTTCGTGATCGGATCTGGTTGCCCTATAACTTTCCTCATTACAAAATTATAAGCACTTCATCCACAATTGATTCAGGAAGTATCAACAATTATAATTTACCAGGAATTGTAATGAGCACTGCTATCACAACTGATAATGCCAGTACTCCTCTTGAATTTCACTGGATTCCTGAAGATCCCAGTGCCAAATATCATGTATACATGCACTTTTCTGATTTTGAAAAGCCCCAAGCCAACCGTTCGAGAGAGTTTAACATCTTTCAAAATGGGGATTATTTTTTTGGACCCTTCTCTCCTGATTACATGTATTCAACTACAGTGTCTAGCAGATCCCCAATGAGTGGATATAGCATTGAATTTACATTGTTAAAAACTAATACTTCTAGTCTTCCACCCATCCTCAATGCTCTTGAAATTTACAGGATGCTAGATGCTTCACAATCACGCACTGATGAGCAGGATATTACAGCACTGATGAACGTCAGATCATTGTATGGAGTGAGAAAGAATTGGCAGGGTGATCCATGCATGCCAAAATCCTTTTTGTGGCACGGTCTTAATTGTAGCATGACCACAGTCCTAATTGAATCACCTCCTTGTAAGTTTTTAAGAATACTCTCTTTGCTCCATTCTCATTTATCTCATTTCATAGACATTTTAAACTCAACATTATCTTCGAGCGGATTGGTGGGGGAAATAGCTACTTATGTATCTGAGCTCTCGTCATTAGAATATTTGGATTTATCAAACAATAGCTTGACTGGACCGGTGCCTGTTTTTCTATCCAAGTTGCACTCCTTGAAAGTCTTAGACTTGAGGGACAATACACTCGTTGGTTCTATTCCAGGTGAACTCATGGAAAGATCGAAGAATGGATCCCTTTCAATAAGGGTTGAAGGAAACCCAAATCTTTGTGCTTCATCTCCTTGCCAAAAAAAGAGGAAGAATTACATTATTCCAGTTGTAGCAATAGTCTCACCAGTGCTGGTTCTCTTAGTTTTAGCTGCAACAGTTGTCTGGATAATGAAATGGAGAAAACGAGCCCGACAACATCCCGTCATAAGACTTGGATCACTGCAGCCAACGAAACAGCAGCTATCTTACTCTGAAATACAGCGTATTACAAACAACTTCGAGAAAAAAATTGGGGAAGGAGGATTTGCAAAAGTGTTCCTTGGTTACTTGGATGGCAATCAAGTTGCCGTGAAGGTCCTTAAGGCTTCGGTTCAAGGTTATAAAGAATTTGAAGCAGAGGTTAAACTTTTGCTGAGAATTCATCACAGAAACTTGACGAGCCTTATCGGATACTGTTATGAAAAAACCAACCTGGTTCTTATCTATGAGTACATAAATAAAGGAAACTTAAAAGAAAATCTATCAGGTGGAAATGATAGTGTTCTTAGTTGGGAGGAAAGGATGCAAGTAGCCGTTGATGCAGCACAAGGATTGGAGTATCTGCATCATGGATGTAAGCCTCCAATTGTTCACAGAGATGTGAAGTCTGCAAACATCCTTTTGAATGAAAAATTTCAAGCCAAAATAGCTGATTTTGGTCTATCCAAGAGTTTTCCAACCGAAAGTCATACTCATTTGTCAACTGTCGTTGCGGGTACCGAAGGATATCTCGATCCTGAGTATTATGCATCTGGCAGATTGACTGAGAAAAGTGATGTTTACAGTTTCGGAGCTCTTATATTGGAGATAGTCACTTCCCATGGCGTCCTCCTAATCGATAGAGCTTCTTCAAGTAAATACCATATAAGCCAATGGGTAATGCACTTGATGAAAACAGGTGATATAAGTAGAATTGTAGATCAGAGGCTAAGAGGAAACTTTGACTTAAGTTCTGCTTGGAAGGCAGTGGAGATTGCTATGACATGTTTGTCACAGACTTCCAGTGAGAGGCCAGGCATGAAGGAAGTGGTTATAGAGTTGAGTGAGTGCTTGGCATTAGAGAAA 2514 39.26 FISIDCGVSKNSSYTDRVTGIKYTSDAYFTETGINKSISSDFNTTTLPQQFWYVRSFPEGDRNCYIIKLAQGKGYKYLIRASFMYGNYDGQGKAPAFDLYMGVNKWDSVVLNNESSIIIKEVIHALPTSSINICLVNTGFGSPFISALELKLLKNATYMTNFELNGNFTKCALNVCVVSLRYSDDVRDRIWLPYNFPHYKIISTSSTIDSGSINNYNLPGIVMSTAITTDNASTPLEFHWIPEDPSAKYHVYMHFSDFEKPQANRSREFNIFQNGDYFFGPFSPDYMYSTTVSSRSPMSGYSIEFTLLKTNTSSLPPILNALEIYRMLDASQSRTDEQDITALMNVRSLYGVRKNWQGDPCMPKSFLWHGLNCSMTTVLIESPPCKFLRILSLLHSHLSHFIDILNSTLSSSGLVGEIATYVSELSSLEYLDLSNNSLTGPVPVFLSKLHSLKVLDLRDNTLVGSIPGELMERSKNGSLSIRVEGNPNLCASSPCQKKRKNYIIPVVAIVSPVLVLLVLAATVVWIMKWRKRARQHPVIRLGSLQPTKQQLSYSEIQRITNNFEKKIGEGGFAKVFLGYLDGNQVAVKVLKASVQGYKEFEAEVKLLLRIHHRNLTSLIGYCYEKTNLVLIYEYINKGNLKENLSGGNDSVLSWEERMQVAVDAAQGLEYLHHGCKPPIVHRDVKSANILLNEKFQAKIADFGLSKSFPTESHTHLSTVVAGTEGYLDPEYYASGRLTEKSDVYSFGALILEIVTSHGVLLIDRASSSKYHISQWVMHLMKTGDISRIVDQRLRGNFDLSSAWKAVEIAMTCLSQTSSERPGMKEVVIELSECLALEK 838
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6349053 6354089 + MC11g0781 Mch11g0927 679861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0927 838 Pfam Protein kinase domain 563 827 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0927 838 CDD STKc_IRAK 567 832 - -
Mch11g0927 838 Gene3D Ribonuclease Inhibitor 340 490 IPR032675 -
Mch11g0927 838 Pfam Malectin-like domain 4 326 IPR024788 -
Mch11g0927 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 679 691 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0927 838 SUPERFAMILY L domain-like 338 473 - -
Mch11g0927 838 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 635 838 - -
Mch11g0927 838 Gene3D Phosphorylase Kinase; domain 1 524 634 - -
Mch11g0927 838 ProSiteProfiles Protein kinase domain profile. 561 834 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0927 838 ProSitePatterns Protein kinases ATP-binding region signature. 567 588 IPR017441 GO:0005524(InterPro)
Mch11g0927 838 Gene3D Transferase(Phosphotransferase) domain 1 635 838 - -
Mch11g0927 838 SMART serkin_6 561 834 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0927 838 SUPERFAMILY Protein kinase-like (PK-like) 543 829 IPR011009 -
Mch11g0927 838 FunFam Leucine-rich repeat receptor-like kinase 338 492 - -
Mch11g0927 838 PANTHER OS07G0107800 PROTEIN-RELATED 1 834 - -
Mch11g0927 838 Pfam Leucine Rich repeats (2 copies) 427 467 IPR025875 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0927 Mch-Chr11:6349053 Mch9g0284 Mch-Chr9:2119528 1.17E-225 dispersed
Mch6g2663 Mch-Chr6:28305449 Mch11g0927 Mch-Chr11:6349053 1.99E-51 dispersed
Mch8g1230 Mch-Chr8:8837390 Mch11g0927 Mch-Chr11:6349053 8.00E-39 dispersed
Mch11g0927 Mch-Chr11:6349053 Mch9g0294 Mch-Chr9:2188377 7.14E-204 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77065 PF12819 Malectin_like 1.30E-105 CL0202 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0927 - - - 0.0