Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0941 CGCGATAAAACCCTAGCTCTGAGATACAAATTAATTGCCATAGCTACGATTCTCCTCGCCGGAATCATTGGAGTGTTCATCCCTATGCTCGGGAAGGCCTTTCCCGCTTTAAGTCCGGAGAAGGAGATTTTCTTCGTGATTAAAGCCTTCGCCGCCGGTGTTATTCTGTCGACCGGATTCATCCATGTTCTTCCCGATGCTTACGAGAGACTGACCTCGTCGAAACTGAAAGAGAATCCGTGGGGGAAGTTTCCGTTCACTGGCTTGGTGGCTATGGTGGCGGCGATCGGAACTCTGATGGTGGACGCTGGTGCCAGTTCTTATTACACTCGGCTCCATCTGAGGAAGGCTCAGCCTGCAGTGACCGGCGACGAAGAGATGCGCGATGTGGCTCAGGACGGCCATGTTCATGTTCGCACTCACGGCACTCATGGTCACGCTCATGGCTCCGTCGAAGTCGCCGGAACATCAACGGAGATTCTCCGGCACCGGGTGATCTCTCAGGTATTGGAACTGGGAATAGTGGTACATTCTGTAATTATTGGGATTGGTTTGGGCGTTTCTGATAATCCAAAAACGATAAGACCTCTTGTGGCGGCCATCACTTTTCATCAGTTATTTGAAGGAATGGGCCTTGGAGGTTGCATTGCTCAGGCGAAGTTCAAGAACAAGGCAGTAATAATAATGGCGCTTTTCTTCTGCCTCACAACGCCCGTCGGGATAGCAATAGGCATTGGAGTAACGAATACTTACGACGAAGAAAGCCCGAAAGCGTTGATAGTTGAGGGAATTTTGAATGCAGCCTCAGCTGGAATCTTGATCTATATGGCTCTAGTAGATCTTTTGGCTGCAGATTTTATGAACCCTAGAATGCAGAGCAATGGAAAGCTTCAAATTTTGGCTAATCTTTCCCTTTTTCTTGGAGCAGCCTTCATGTCTTTACTCGCCATATGGGCT 957 49.01 RDKTLALRYKLIAIATILLAGIIGVFIPMLGKAFPALSPEKEIFFVIKAFAAGVILSTGFIHVLPDAYERLTSSKLKENPWGKFPFTGLVAMVAAIGTLMVDAGASSYYTRLHLRKAQPAVTGDEEMRDVAQDGHVHVRTHGTHGHAHGSVEVAGTSTEILRHRVISQVLELGIVVHSVIIGIGLGVSDNPKTIRPLVAAITFHQLFEGMGLGGCIAQAKFKNKAVIIMALFFCLTTPVGIAIGIGVTNTYDEESPKALIVEGILNAASAGILIYMALVDLLAADFMNPRMQSNGKLQILANLSLFLGAAFMSLLAIWA 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6447182 6449903 + MC11g0789 Mch11g0941 679875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0941 319 NCBIfam ZIP zinc/iron transport family 2 319 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Mch11g0941 319 Pfam ZIP Zinc transporter 8 316 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Mch11g0941 319 PANTHER ZINC/IRON TRANSPORTER 4 318 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0941 Mch-Chr11:6447182 Mch4g0019 Mch-Chr4:137587 4.35E-116 dispersed
Mch11g0941 Mch-Chr11:6447182 Mch11g0942 Mch-Chr11:6452478 1.17E-188 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0941 K14709 - csv:101215851 523.472