Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0942 ATGGCAATGGCGAACGCTAAGCTTCATCCTCTGCTTCTCGCTTTCCTCTGCCTCTTTCTTCTGCTCCTCCCTGTGGCGATTTCGGCAGAGTGTCAGTGCCCTGAAGAAGAAGGAGAAGAAGAAATAGGGCACCACGATAAATCCGCAGCTCTGAAATACAAAATCGTTGCCATAGCTACGATTCTTCTCGCCGGAGTCATCGGAGTATTTATACCTATGCTCGGGAAGGCGTTTCCGGCTTTAAGTCCGGAGAAGGAGATTTTCTTTGTGATTAAAGCCTTTGCCGCCGGCGTTATTCTGTCGACCGGATTCATCCATGTTCTTCCCGATGCTTACGAGAGCCTGACGTCGCCGAAACTGAAAGACGGTCCGTGGGGGAATTTTCCGTTCACTGGCTTGGTGGCTATGGTGGCGGCGATCGGGACTCTAATGGTGGACGCTGGCGCCAGTTCTTATTACACGCGGCTCCATCTGAGGAAGGCTCAGCCTACGGTGAGCGGCGATGAAGAAATGCACGGCGATGCTCACGAGGGCCACGTTCATGTTCACACTCACGGCACTCACGGTCACGCTCATGGCTCCGTCGAAGTCGCCGGAACGACAACGGAGATTCTCAGGCACCGAGTAATCTCTCAGGTATTGGAACTCGGGATAGTGGTACATTCTGTAATTATAGGGATTGGTTTGGGCGTTACTCAAAGCCCGAAAACGATTAGACCTCTTGTGGCGGCCATCACCTTTCATCAGTTATTTGAAGGAATGGGCCTTGGAGGATGCATTGCTCAGGCGAAGTTCAAGCACAAGGCAGTAATAATAATGGCGCTTTTCTTCTGCCTCACGACACCAGTCGGGATAGCAATAGGCATAGGAGTAACGAACAGTTATAACGAAGACAGCCCAAAAGCTCTAGTAGTTGAGGGAATTTTGAATGCAGCATCATCTGGAATCTTAATCTATATGTCTTTGGTGGATCTTCTGGCGGCTGATTTCATGAATCCCAGAATGCAGAGCAATGCAAAGCTTCAAATTTTGGCTAATATTTCCCTTATTCTTGGAGCTGCATTGATGTCTTTACTTGCCATATGGGCTTGA 1092 49.45 MAMANAKLHPLLLAFLCLFLLLLPVAISAECQCPEEEGEEEIGHHDKSAALKYKIVAIATILLAGVIGVFIPMLGKAFPALSPEKEIFFVIKAFAAGVILSTGFIHVLPDAYESLTSPKLKDGPWGNFPFTGLVAMVAAIGTLMVDAGASSYYTRLHLRKAQPTVSGDEEMHGDAHEGHVHVHTHGTHGHAHGSVEVAGTTTEILRHRVISQVLELGIVVHSVIIGIGLGVTQSPKTIRPLVAAITFHQLFEGMGLGGCIAQAKFKHKAVIIMALFFCLTTPVGIAIGIGVTNSYNEDSPKALVVEGILNAASSGILIYMSLVDLLAADFMNPRMQSNAKLQILANISLILGAALMSLLAIWA 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6452478 6455777 - MC11g_new0153 Mch11g0942 679876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0942 363 NCBIfam ZIP zinc/iron transport family 40 363 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Mch11g0942 363 PANTHER ZINC/IRON TRANSPORTER 48 362 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Mch11g0942 363 Pfam ZIP Zinc transporter 52 360 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0942 Mch-Chr11:6452478 Mch4g0019 Mch-Chr4:137587 9.08E-125 dispersed
Mch11g0941 Mch-Chr11:6447182 Mch11g0942 Mch-Chr11:6452478 1.17E-188 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0942 K14709 - csv:101215851 529.635