Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch11g0964 | ATGGAGACGATGATGTCAGTTGTTTGGATTTGGGTGGTGGTTTTAGTGGGATTATTATGGGGATGGAGTGTTGTCAACTGGGTTTGGGTCAGGCCAAAGAAGCTTGAGAACTTGCTCAGAGGCCAAGGCTTCGCCGGAAATTCCTACCGGATTTTCTACGGCGACTTGAAGGATCGATCGGCCCTGTCGGAGCGGGCAAACTCCAAGCCGATGAACTTCTCCCATCATATTGCTCCACGTATCATCCCCTCCGAATATCAAACCATACAAAACTATGGTAAGAATTCATTCACGTGGTTTGGGCCGTATCCAAGAGTGCACATAATGGAGCCAGAAAAACTCAAAGATATATTTTCTCTAATTGATGATGTTCCTAAGCCAAATTTAAACCCCATGATCAAGCTACTTTTAGAAGGAATTGTAAGCTACCAAGGGGCAAAATGGGCCAAACACAAGAAGATAATTGCCCCTGCATTTCACTTCTTAAAGTTGAAGGACATGGTACCAACATTCTTCAACACGTGTAACGAGATGGTTAGCCAATGGGAAAGATTAGTTTCAAAAGACGGATCGTGCGAGTTGGATGTCATGCCTTATCTTCATAATTTAACGGCCGATATCATCTCTCGAACCGCATGTGGGAGTAGCTACAAGGAAGGACAAATGATCTTCCAACTTTTGAAAGAATTGATTGAGCTGGTAACTAAATCAGCATCTGGGTTTTATATTCCAGGATGGAGGTTTGTACCAACCAAATCGAACAATGAAATGAAAAGATTAGACAGAGAAATAAGTAATTTGCTTTTGGGTATCATAAAGAAAAGGCAAAAGTCCTTAGAGAATGGTGAATTAGCAGTACAAAAAAGAGATTTGTTAGGTCTTCTCTTGGAATCAAATTTAAATGAAATTCGAGAACATGACAATAATAAAGATGTTGGCATAAGTTTAGAAGATGTTGTTAAAGAATGCAAGGTTTTCTATCTAGCTGGCCAAGAAACCACAGCATCATTACTAGTTTGGACGATGGTTCTATTGAGTTCACACAAGGAATGGCAAGAACGAGCTAGAGCAGAGGTCCTTCAAGTCTTTGGAAACAAAGAACCTCATTATGATGGTTTGACTCACCTTAAAGTCGTAACTATGATTTTGAACGAGGTCCTACGGCTATACCCACCTGCTGGTATGCTGAATCGTATTTTTGAAAAAGAGACCAGACTTGGAGAATTAATAATGCCTGGGGGAGTGTTGTTGGGCATACCAGTTATTCTAATCCATCGTGATCGTGAAATATGGGGGGAGGATGCAGATGAATTCAACCCAGAGAGATTCTCAGAGGGAGTTTCTAATGCAGCAAAAGTTCAACCTGCTTTCTTCCCATTTGGATGGGGTCCTCGAATATGCATGGGCCAAAACTTTTCTATGATGGAGGCAAAAATGCTACTATCTTTAGTTCTTCGATCCTTCTCATTTGAGCTTTCTCCCTCATATACTCATGCTCCTATTGCTATTATGACCACTCAGCCTCAACATGGAGCTCATATCATCTTTCACAAATTGTAA | 1560 | 41.03 | METMMSVVWIWVVVLVGLLWGWSVVNWVWVRPKKLENLLRGQGFAGNSYRIFYGDLKDRSALSERANSKPMNFSHHIAPRIIPSEYQTIQNYGKNSFTWFGPYPRVHIMEPEKLKDIFSLIDDVPKPNLNPMIKLLLEGIVSYQGAKWAKHKKIIAPAFHFLKLKDMVPTFFNTCNEMVSQWERLVSKDGSCELDVMPYLHNLTADIISRTACGSSYKEGQMIFQLLKELIELVTKSASGFYIPGWRFVPTKSNNEMKRLDREISNLLLGIIKKRQKSLENGELAVQKRDLLGLLLESNLNEIREHDNNKDVGISLEDVVKECKVFYLAGQETTASLLVWTMVLLSSHKEWQERARAEVLQVFGNKEPHYDGLTHLKVVTMILNEVLRLYPPAGMLNRIFEKETRLGELIMPGGVLLGIPVILIHRDREIWGEDADEFNPERFSEGVSNAAKVQPAFFPFGWGPRICMGQNFSMMEAKMLLSLVLRSFSFELSPSYTHAPIAIMTTQPQHGAHIIFHKL | 519 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 6583397 | 6588946 | + | MC11g_new0168 | Mch11g0964 | 679898 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch11g0964 | 519 | PRINTS | P450 superfamily signature | 381 | 392 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0964 | 519 | PRINTS | P450 superfamily signature | 467 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0964 | 519 | PRINTS | P450 superfamily signature | 458 | 467 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0964 | 519 | PRINTS | P450 superfamily signature | 329 | 346 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0964 | 519 | Gene3D | Cytochrome P450 | 79 | 518 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0964 | 519 | PRINTS | E-class P450 group I signature | 467 | 490 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0964 | 519 | PRINTS | E-class P450 group I signature | 318 | 335 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0964 | 519 | PRINTS | E-class P450 group I signature | 457 | 467 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0964 | 519 | PRINTS | E-class P450 group I signature | 338 | 364 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0964 | 519 | FunFam | Cytochrome P450 734A1 | 29 | 519 | - | - | |
| Mch11g0964 | 519 | SUPERFAMILY | Cytochrome P450 | 78 | 517 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0964 | 519 | Pfam | Cytochrome P450 | 90 | 498 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0964 | 519 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 13 | 511 | IPR050665 | GO:0004497(PANTHER) | |
| Mch11g0964 | 519 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 460 | 469 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch11g0964 | Mch-Chr11:6583397 | Mch11g0973 | Mch-Chr11:6663620 | 0 | dispersed | |
| Mch11g0964 | Mch-Chr11:6583397 | Mch11g0965 | Mch-Chr11:6604882 | 8.37E-279 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch11g0964 | - | - | - | 0.0 |