Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch11g0965 | ATGGAAACTTCAGTTGAGGTTGTGGTTTCCATTTGTATGGTTTTGATGAGTTTGGTGGGATGGAGAGTTTTCGACTGGCTCTGGCTCCGGCCTAAGAGGCTTCAAAACTTCCTCACACGCCAAGGCTTCGCCGGAAATTCTTACCGGATTTTCGTCGGAGACTTGAAGGAGTTGGCGGCCGCATCCGGGCAGGCGAGGTCGAACCCCATGCCAACATTCTCCCATGATATCGCTCCACGTGTAGTCCCCTCCGAATACAAAACCATTCAAAACTACGGTAAAAATTCATACATGTGGCTTGGCCCATATCCAAGAGTGCACATCATGGACCCAACACACCTTAAAGCAACTTTTACCCAAATTGATGAAATCCAAAAGCCAAATTTTAACCCCATTGTGAAGTTACTGTTGGATGGAGTTTTAACTTACGAAGGACAAAAATGGGCAAAGCACAAAAAGATCATTAGCCCTGCATTTTATTTGCTAAAGTTGAAGGATATGGTACCAAAATTCATTCACACTTGTAATGAGATGATTAGTGATTGGGAAAGATTGATTTCAAAAGAGGGATGGTGTGAGATAGATGTTATGCCTTACCTACACAATCTAACAGCTGATTCCATTTCTCGAACGGCATGTGGGAGTAGTTTCAAAGAAGGACAAATAATCTTCAAACTTTTAAAAGAATTGACTGATTTGGTAGTTGAAGCTGCCTCCCGCATTTATATTCCTGGATGGAGGTTTGTGCCAACGAAGTCAAACAGAAAAATGAAAAAAATAGATAGAGAAATAAACACTTTACTTATGGGTATCATAAACAAAAGGCAAAAGGCTATGGAGAAAGGCGAGCTGGGTGCACAAAGTGACTTATTAGGCATTCTCCTAGAATCGAATCTAAGGGAAATCGAAGAACATGGAAACAACAAACGTGATGGAATGAGCATAGAAGAAGTTGTTAAAGAATGCAGAATTTTCTATCTTGCTGGCCAGGAAACCACTGCGTCCTTACTGATTTGGACGATGCTCTGTTTGAGTTTACACAAGCAATGGCAAGATCGAGCAAGAGTAGAGGTCCTGCAAGTGTTTGGCAACAAAGATCCAACTTTTGATGGTTTAAGTTCCTTAAAAGTTGTAACTATGATTATGAATGAGGTTATGAGGCTATACCCACCAGCAAATACTATACATCGTGTTGTTCAGAAAGAAACTAGACTTGGAAATCTAACTATACCATCTGGAGTAATATTGTGTATACCAGTTATTTTAATACATCGTGATCGAGAGATATGGGGCGATGATGCACATGAATTTAAACCAGAAAGATTCAGTGAAGGAATTTCTAACGCATCAAAAGCTCAACCTGGTTTCCTCCCATTTGCATGGGGCCCTCGAATATGCATGGGGCAGAACTTTGCAATGATGGAGGCAAAAATAGTATTTTCAATAATTCTACAACACTTCTCATTTGAGCTTTCTTCATCATACACTCATGCTCCCACGTCTATTATGACTACTCAGCCCCAACATGGAGCTCATATCATCCTACGCAAACTATAG | 1557 | 40.72 | METSVEVVVSICMVLMSLVGWRVFDWLWLRPKRLQNFLTRQGFAGNSYRIFVGDLKELAAASGQARSNPMPTFSHDIAPRVVPSEYKTIQNYGKNSYMWLGPYPRVHIMDPTHLKATFTQIDEIQKPNFNPIVKLLLDGVLTYEGQKWAKHKKIISPAFYLLKLKDMVPKFIHTCNEMISDWERLISKEGWCEIDVMPYLHNLTADSISRTACGSSFKEGQIIFKLLKELTDLVVEAASRIYIPGWRFVPTKSNRKMKKIDREINTLLMGIINKRQKAMEKGELGAQSDLLGILLESNLREIEEHGNNKRDGMSIEEVVKECRIFYLAGQETTASLLIWTMLCLSLHKQWQDRARVEVLQVFGNKDPTFDGLSSLKVVTMIMNEVMRLYPPANTIHRVVQKETRLGNLTIPSGVILCIPVILIHRDREIWGDDAHEFKPERFSEGISNASKAQPGFLPFAWGPRICMGQNFAMMEAKIVFSIILQHFSFELSSSYTHAPTSIMTTQPQHGAHIILRKL | 518 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 6604882 | 6607954 | - | MC11g_new0169 | Mch11g0965 | 679899 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch11g0965 | 518 | PRINTS | P450 superfamily signature | 380 | 391 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0965 | 518 | PRINTS | P450 superfamily signature | 328 | 345 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0965 | 518 | PRINTS | P450 superfamily signature | 457 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0965 | 518 | PRINTS | P450 superfamily signature | 466 | 477 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0965 | 518 | SUPERFAMILY | Cytochrome P450 | 80 | 516 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0965 | 518 | PRINTS | E-class P450 group I signature | 89 | 108 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0965 | 518 | PRINTS | E-class P450 group I signature | 456 | 466 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0965 | 518 | PRINTS | E-class P450 group I signature | 317 | 334 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0965 | 518 | PRINTS | E-class P450 group I signature | 337 | 363 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0965 | 518 | PRINTS | E-class P450 group I signature | 466 | 489 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0965 | 518 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 11 | 510 | IPR050665 | GO:0004497(PANTHER) | |
| Mch11g0965 | 518 | Pfam | Cytochrome P450 | 90 | 493 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0965 | 518 | Gene3D | Cytochrome P450 | 80 | 517 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0965 | 518 | FunFam | Cytochrome P450 734A1 | 28 | 518 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch11g0965 | Mch-Chr11:6604882 | Mch11g0973 | Mch-Chr11:6663620 | 1.64E-261 | dispersed | |
| Mch11g0964 | Mch-Chr11:6583397 | Mch11g0965 | Mch-Chr11:6604882 | 8.37E-279 | tandem | |
| Mch11g0965 | Mch-Chr11:6604882 | Mch11g0966 | Mch-Chr11:6614508 | 3.25E-193 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch11g0965 | - | - | - | 0.0 |