Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch11g0966 | ATGATATTGCTCCACGCATCGTCCCTTTCCTTCATCGAACCATCCAAATTTACGGAAAAAAATTCATTTACGTGGAACGGCCCCATTCCAAGTGTGCTGACGATGGAGCCAGAACAAGTTAAAACAGCATTTATGCAAGTGGATGATTTCCGAAAGCCAAAGATGGACCATCTTATTAAGTTGATTGCTGATGGACTTGTAAACCATGAAGGACCAAAATGGGAGAAACACAGAAAAATAATCAACCCTGCATTTCATTTGGAAAAGTTGAAGGATATGGTACCAGCATTCTATCAATGTTGTGACGAGATGGTTAATAAATGGGAGAGAATGGTCTCTAAAGAGGGACAGTGCGAGTTGGATGTAATACCTTATCTACAAACTATGACTGTCGATGCCATTTCTCGAACAACATTTGGGAGTAGCTATGAAAAAGGAAAAAAGATCTTCGAACTTCAAAAACAACTAAATTTTTCGGTGATTAAATATTTGTCAATGATGACCAATCCAATATGGAGGTTTTTACCCACCAAGTCAAAAAATAAAATGAAAAAGATGGGTAAAGAGATTAAAAGTTTGATATTGGGTATTATAAATGAAAGACAGAAGGCTATGGAGGCAGGTGAAGCTGCATACAGTGATCTATTAGGCATACTGATGGAATCTAATCTCAACGAAATTCGACAACATGGAAATAACAAAAATGTTGGAATGAGTATAGAAGATGTTATCGAAGAATGCAAGCTTTTCTATCTTGCTGGCCAAGAAACTACAGCTACATTACTAATTTGGACTATGATTTTATTGAGTTCATACTCAGAATGGCAAGAAAGAGCAAGAGCAGAGGTTCGAGAAGTCTTTGATAACAGAAAGCCAGATTATAACGGTTTAAGTCGTCTAAAAATTGTAACTATGATTTTAAACGAAGTTCTTAGGTTATACCCACCGGTAAGTGTGCTTGATCGTGTCGTTGAAAAGGAAATGAAGCTTGGAAATTTGTCTTTACCAGCGGGAGTGATATTGAGGTTACCAATCATTTTCATCCATCATGATCGTGAGCTATGGGGTGAAGATGCACTTGAATTCAATCCACAAAGATTTTTTGATGGAGTTTCTAAAGCAACAAAAAATCAAACCATTTTTATCCCATTTGGTTTGGGTCCTCGAACATGCCTCGGACAAAACTTCGCCATGATTGAGGCAAAAATGGCACTGTCAACAATTCTACAGCAGTTCTCATTCCAGCTTTCTCCATCATATACTCATGCTCCCTTCGTAACTATAACAACCCAACCTCAACATGGAGCTCATATCATCCTCCACAAACTCAACTAA | 1335 | 37.75 | MILLHASSLSFIEPSKFTEKNSFTWNGPIPSVLTMEPEQVKTAFMQVDDFRKPKMDHLIKLIADGLVNHEGPKWEKHRKIINPAFHLEKLKDMVPAFYQCCDEMVNKWERMVSKEGQCELDVIPYLQTMTVDAISRTTFGSSYEKGKKIFELQKQLNFSVIKYLSMMTNPIWRFLPTKSKNKMKKMGKEIKSLILGIINERQKAMEAGEAAYSDLLGILMESNLNEIRQHGNNKNVGMSIEDVIEECKLFYLAGQETTATLLIWTMILLSSYSEWQERARAEVREVFDNRKPDYNGLSRLKIVTMILNEVLRLYPPVSVLDRVVEKEMKLGNLSLPAGVILRLPIIFIHHDRELWGEDALEFNPQRFFDGVSKATKNQTIFIPFGLGPRTCLGQNFAMIEAKMALSTILQQFSFQLSPSYTHAPFVTITTQPQHGAHIILHKLN | 444 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 6614508 | 6617458 | - | MC11g_new0170 | Mch11g0966 | 679900 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch11g0966 | 444 | PRINTS | E-class P450 group I signature | 262 | 288 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0966 | 444 | PRINTS | E-class P450 group I signature | 391 | 414 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0966 | 444 | PRINTS | E-class P450 group I signature | 242 | 259 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0966 | 444 | PRINTS | E-class P450 group I signature | 381 | 391 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0966 | 444 | PRINTS | E-class P450 group I signature | 345 | 369 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0966 | 444 | PRINTS | E-class P450 group I signature | 129 | 147 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0966 | 444 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 384 | 393 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch11g0966 | 444 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 18 | 435 | IPR050665 | GO:0004497(PANTHER) | |
| Mch11g0966 | 444 | Gene3D | Cytochrome P450 | 18 | 442 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0966 | 444 | PRINTS | P450 superfamily signature | 391 | 402 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0966 | 444 | PRINTS | P450 superfamily signature | 253 | 270 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0966 | 444 | PRINTS | P450 superfamily signature | 382 | 391 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0966 | 444 | PRINTS | P450 superfamily signature | 305 | 316 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0966 | 444 | SUPERFAMILY | Cytochrome P450 | 15 | 441 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0966 | 444 | Pfam | Cytochrome P450 | 25 | 419 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch11g0966 | Mch-Chr11:6614508 | Mch11g1516 | Mch-Chr11:12331416 | 4.24E-236 | dispersed | |
| Mch11g0965 | Mch-Chr11:6604882 | Mch11g0966 | Mch-Chr11:6614508 | 3.25E-193 | tandem | |
| Mch11g0966 | Mch-Chr11:6614508 | Mch11g0967 | Mch-Chr11:6625282 | 2.22E-238 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch11g0966 | - | - | - | 0.0 |