Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch11g0973 | ATGATGTCAGTTGTTTGGATTTGGGTGGTGGTTTTAGTGGGATTATTATGGGGATGGAGTGTTGTCAACTGGGTTTGGGTCAGGCCAAAGAAGCTTGAGAACTTGCTCAGAGGCCAAGGCTTCGCCGGAAATTCCTACCGGATTTTCTACGGCGACTTGAAGGATCGATCGGCCCTGTCGGAGCGGGCAAACTCCAAGCCGATGAACTTCTCCCATCATATTGCTCCACGTATCATCCCCTCCGAATATCAAACCATACAAAACTATGATGTTCACTTAGAAGCCACTAAGCTAAAGCCCATTTTTAGAGGTCGACATATATTACTCGAAATTCAAGGTCCTCGGCCGAAGAGACTTGAGCAGTTGCTCAGAGGCCAAGGCTTCGCCGGAAATTCCTACCGGATTTTCTACGGCGACTTGAACGACGGATTGGCCCTGTCGGAGCGGGCAAACTCCAAGCCGATGAACTTCTCCCATCATATTGCTCCACGTATCATCCCCTCCGAATATCAAACCATACAAAACTATGGTAAGAATTCATTCACGTGGTTTGGGCCGTATCCAAGAGTGCACATAATGGAGCCAGAAAAACTCAAAGATATATTTTCTCTAATTGATGATGTTCCTAAGCCAAATTTAAACCCCATGATCAAGCTACTTTTAGAAGGAATTGTAAGCTACCAAGGGGCAAAATGGGCCAAACACAAGAAGATAATTGCCCCTGCATTTCACTTCTTAAAGTTGAAGGACATGGTACCAACATTCTTCAACACGTGTAACGAGATGGTTAGCCAATGGGAAAGATTAGTTTCAAAAGACGGATCGTGCGAGTTGGATGTCATGCCTTATCTTCATAATTTAACGGCCGATATCATCTCTCGAACCGCATGTGGGAGTAGCTACAAGGAAGGACAAATGATCTTCCAACTTTTGAAAGAATTGATTGAGCTGGTAACTAAATCAGCATCTGGGTTTTATATTCCAGGATGGAGGTTTGTACCAACCAAATCGAACAATGAAATGAAAAGATTAGACAGAGAAATAAGTAATTTGCTTTTGGGTATCATAAAGAAAAGGCAAAAGTCCTTAGAGAATGGTGAATTAGCAGTACAAAAAAGAGATTTGTTAGGTCTTCTCTTGGAATCAAATTTAAATGAAATTCGAGAACATGACAATAATAAAGATGTTGGCATAAGTTTAGAAGATGTTGTTAAAGAATGCAAGGTTTTCTATCTAGCTGGCCAAGAAACCACAGCATCATTACTAGTTTGGACGATGGTTCTATTGAGTTCACACAAGGAATGGCAAGAACGAGCTAGAGCAGAGGTCCTTCAAGTCTTTGGAAACAAAGAACCTCATTATGATGGTTTGACTCACCTTAAAGTCGTAACTATGATTTTGAACGAGGTCCTACGGCTATACCCACCTGCTGGTATGCTGAATCGTATTTTTGAAAAAGAGATCAGACTTGGAGAATTAATAATGCCTGGGGGAGTGTTGTTGGGCATACCAGTTATTCTAATCCATCGTGATCGTGGAATATGGGGGGAGGATGCAGATGAATTCAACCCAGAGAGATTCTCAGAGGGAGTTTCTAATGCAGCAAAAGTTCAACCTGCTTTCTTCCCATTTGGATTGGGTCCTCGAATATGCATGGGCCAAAACTTTTCTATGATGGAGGCAAAAATGCTACTATCTTTAGTTCTTCGATCCTTCTCATTTGAACTTTCTCCATCATATATTCATGCTCCTACTGTCATTATGAATACTCTGCCTCAACATGGAGCTCGTATCATCTTTCACAAATTGTAA | 1812 | 41.78 | MMSVVWIWVVVLVGLLWGWSVVNWVWVRPKKLENLLRGQGFAGNSYRIFYGDLKDRSALSERANSKPMNFSHHIAPRIIPSEYQTIQNYDVHLEATKLKPIFRGRHILLEIQGPRPKRLEQLLRGQGFAGNSYRIFYGDLNDGLALSERANSKPMNFSHHIAPRIIPSEYQTIQNYGKNSFTWFGPYPRVHIMEPEKLKDIFSLIDDVPKPNLNPMIKLLLEGIVSYQGAKWAKHKKIIAPAFHFLKLKDMVPTFFNTCNEMVSQWERLVSKDGSCELDVMPYLHNLTADIISRTACGSSYKEGQMIFQLLKELIELVTKSASGFYIPGWRFVPTKSNNEMKRLDREISNLLLGIIKKRQKSLENGELAVQKRDLLGLLLESNLNEIREHDNNKDVGISLEDVVKECKVFYLAGQETTASLLVWTMVLLSSHKEWQERARAEVLQVFGNKEPHYDGLTHLKVVTMILNEVLRLYPPAGMLNRIFEKEIRLGELIMPGGVLLGIPVILIHRDRGIWGEDADEFNPERFSEGVSNAAKVQPAFFPFGLGPRICMGQNFSMMEAKMLLSLVLRSFSFELSPSYIHAPTVIMNTLPQHGARIIFHKL | 603 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 6663620 | 6668928 | - | MC11g_new0174 | Mch11g0973 | 679907 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch11g0973 | 603 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 120 | 595 | IPR050665 | GO:0004497(PANTHER) | |
| Mch11g0973 | 603 | PRINTS | P450 superfamily signature | 542 | 551 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0973 | 603 | PRINTS | P450 superfamily signature | 551 | 562 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0973 | 603 | PRINTS | P450 superfamily signature | 413 | 430 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0973 | 603 | PRINTS | P450 superfamily signature | 465 | 476 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0973 | 603 | Pfam | Cytochrome P450 | 174 | 578 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0973 | 603 | PRINTS | E-class P450 group I signature | 402 | 419 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0973 | 603 | PRINTS | E-class P450 group I signature | 541 | 551 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0973 | 603 | PRINTS | E-class P450 group I signature | 551 | 574 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0973 | 603 | PRINTS | E-class P450 group I signature | 422 | 448 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0973 | 603 | FunFam | Cytochrome P450 734A1 | 114 | 603 | - | - | |
| Mch11g0973 | 603 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 544 | 553 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch11g0973 | 603 | SUPERFAMILY | Cytochrome P450 | 163 | 600 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g0973 | 603 | Gene3D | Cytochrome P450 | 148 | 602 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch11g0964 | Mch-Chr11:6583397 | Mch11g0973 | Mch-Chr11:6663620 | 0 | dispersed | |
| Mch11g0965 | Mch-Chr11:6604882 | Mch11g0973 | Mch-Chr11:6663620 | 1.64E-261 | dispersed | |
| Mch11g0973 | Mch-Chr11:6663620 | Mch11g1516 | Mch-Chr11:12331416 | 3.05E-246 | dispersed | |
| Mch11g0967 | Mch-Chr11:6625282 | Mch11g0973 | Mch-Chr11:6663620 | 1.10E-213 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch11g0973 | - | - | - | 0.0 |