Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g0982 | ATGCCTGGGAATAAGTATAACGGTAATTCAAAAGACATTTCAGACCATATTCCAGGTCGAGTGGAAAGACTCTTGCGAGAGAGAAAGCTAAGGAAAAAAAGCAGTAAGGATTCATATTCGAACGAGGTAAACGAGTACAGTAAGGATTCTTCTGAACTAATTGAAAATGACCTTCGTTTGAAAGAAGAAGAAAGCCCTGGAGTTTCCTCTAAATTTCTGGAAGCTTCTATAGCCTCAAGGGCCTATGGCGAAGGATGTGAAAACCAAGAGGGGAAGCCTCCTCGACAACGATTGTTGGTTGTGGCCAATAGGCTGCCTGTCTCTGCAGTTAGGAGAGGTGAAGATTCTTGGTCTCTGGAGATCAGTGCTGGAGGTCTAGTGAGTGCACTTCTTGGCGTAAAGGAATTTGAAGCGAGATGGATTGGTTGGGCTGGTGTAAATGTGCCAGACGAGGTAGGACAAAAGGCACTGACTGAAGCTTTGGCTGAAAAGAGGTGTATCCCTGTTTTCCTTGATGAAGAGATTGTTCATCAATACTACAATGGTTATTGTAACAACATTTTATGGCCTTTATTTCATTACCTTGGACTTCCTCAAGAAGATCGTCTTGCCACCACCCGTAGCTTTCAGTCTCAGTTTGCCGCATATAAGAAGGCAAACCAAATGTTTGCTGATGTTGTTAACAAGCACTATGAGGAGGGTGATGTTGTGTGGTGCCATGATTACCATCTTATGTTTCTTCCAAAATGTCTCAAAGAACATAATAGCAAGATGAAAGTCGGCTGGTTTCTCCATACACCTTTTCCTTCTTCTGAAATCCACAGGACCCTTCCATCCCGATCAGAGCTTTTGCGCTCGGTACTTGCTGCTGATCTGGTTGGCTTCCACACATATGATTATGCTCGTCATTTTGTAAGTGCTTGTACTCGTATTCTTGGACTCGAGGGTACACCTGAAGGAGTTGAGGATCAAGGAAAACTAACGCGAGTTGCTGCATTCCCTATTGGTATAGACTCAGATCGATTCGTACGTGCTCTCAAGATCCCTGAAGTCCAAGAACATATTGAAGAGTTGAAGGAAAGATTCAAAGGCCGGAAGGTAATGTTAGGTGTTGATCGGCTTGATATGATTAAGGGAATACCTCAAAAGATATTAGCATTTGAAAAGTTCTTGGAGGAAAACCCTATTTGGCGTGATAAAGTTGTTTTGCTGCAAATTGCAGTGCCAACAAGAACAGACGTGCCAGAATATCAAAAGCTTACGAGTCAGGTTCATGAGATAGTTGGACGCATTAATGGGAGATTTGGAACTTTGACTACTGTGCCTATACATCATCTGGATCGCTCCCTTGATTTTCATGCATTATGTGCTCTATATGCTGTTACTGACGTAGCACTTGTCACATCTTTGAGGGATGGAATGAATCTTGTCAGCTATGAGTTTGTTGCTTGCCAGGATGCAAAGAAAGGGGTTTTAATTCTTAGCGAGTTTGCTGGCGCTGCACAATCTCTGGGTGCTGGAGCCCTTCTGGTCAACCCCTGGAACATAACAGAAGTCGCAAAATCAATCGATCGAGCATTAAATATGGATGCTGAAGAAAGAGAAAAGCGCCATAGGCACAATTTTCTCCATGTGACAACACACACTGCCCAGGAATGGGCAGAAACTTTTGTGAGTGAACTCAATGATACTGTGGTTGAAGCTGAACTGAGGATAAGACAAGCTCCACCCCCACTTCCATTCAACAATGCAATCAAACATTATGAGCAATCTACCAATCGATTACTTATACTAGGGTTCAATGCAACACTAACTGAACCAGTGGACACGCCCGAGAGAAGAGGCGATCAGATTAGAGAAATGGAACTGAAGCTGCACCCGGATCTGAAAGAACCATTGACAGCAATTTGCAACGACGAGAATACGACAGTAGTCATCCTCAGTGGGAGTGACAGAACTGTCTTGGATGATAACTTTGGAGAGTACGACATGTGGTTGGCAGCGGAGAATGGGATGTTTCTACGCTTCACAAGAGGAGACTGGATGACCACAATGCCTGAGCATTTGAATATGGAATGGGTCGACAGTGTGAAGCATGTTTTTGAGTACTTCACAGAGAGAACTCCCCGTTCCCATTTTGAGCTCCGGGAAACTTCGCTTGTTTGGAACTACAAATATGCAGATGTCGAGTTTGGAAGGCTTCAAGCAAGGGATATGTTGCAGCATCTGTGGACAGGTCCAATTTCCAATGCATCAGTTGATGTTGTTCAAGGTAGCCGATCTGTCGAGGTCCGAGCGGTTGGCGTTACCAAGGGATCAGCAATTGACCGAATACTGGGAGAAATAGTTCACAGCAAGTCCATGACGACTCCAATAGACTATGTCCTGTGTGTCGGCCACTTTCTTGGGAAGTTCAGGATTGTATTTTTTAGCCCTCAAACTCATTTAAATCATTTGTGTCATCAGGATGAAGATGTCTACACCTTCTTTGAGCCCGAGCTTCCATCGGATACCATAGGAATGGCAAGAACCAGAGGAACTGACGGACTTAAGTTAACTGGTGAGAGAAGATCTTCCATTAAAGTTCCTCTAAATAGGAATGGGTCGAGATCGCCTCACAATAAGGCGCGGTCGAATTCGGAGAAGAAAAATTCGAATCATAACTGTGCAAACGGTCGTAAGCCATCTCCAGAGAAGATCCAATGGAATGTGCTTGATCTCAAGGCCGAGAACTACTTCTCTTGTGCTGTTGGACGAACTCGGACGAATGCTCGGTATCTACTTGGATCGTCAGATGATGTCGTGGCGTTCCTAAAGGAGTTGTCAAGTGCAAATGCATCTTCT | 2844 | 44.23 | MPGNKYNGNSKDISDHIPGRVERLLRERKLRKKSSKDSYSNEVNEYSKDSSELIENDLRLKEEESPGVSSKFLEASIASRAYGEGCENQEGKPPRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTEALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKEHNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFVRALKIPEVQEHIEELKERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPIWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTTVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDAKKGVLILSEFAGAAQSLGAGALLVNPWNITEVAKSIDRALNMDAEEREKRHRHNFLHVTTHTAQEWAETFVSELNDTVVEAELRIRQAPPPLPFNNAIKHYEQSTNRLLILGFNATLTEPVDTPERRGDQIREMELKLHPDLKEPLTAICNDENTTVVILSGSDRTVLDDNFGEYDMWLAAENGMFLRFTRGDWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFELRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGSAIDRILGEIVHSKSMTTPIDYVLCVGHFLGKFRIVFFSPQTHLNHLCHQDEDVYTFFEPELPSDTIGMARTRGTDGLKLTGERRSSIKVPLNRNGSRSPHNKARSNSEKKNSNHNCANGRKPSPEKIQWNVLDLKAENYFSCAVGRTRTNARYLLGSSDDVVAFLKELSSANASS | 948 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6719969 | 6736836 | - | MC11g0806 | Mch11g0982 | 679916 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g0982 | 948 | Gene3D | - | 621 | 781 | IPR023214 | - | |
Mch11g0982 | 948 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 96 | 565 | - | - | |
Mch11g0982 | 948 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like | 344 | 546 | - | - | |
Mch11g0982 | 948 | NCBIfam | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | 97 | 562 | IPR012766 | GO:0003825(InterPro)|GO:0005992(InterPro) | |
Mch11g0982 | 948 | Gene3D | Glycogen Phosphorylase B; | 89 | 343 | - | - | |
Mch11g0982 | 948 | MobiDBLite | consensus disorder prediction | 862 | 896 | - | - | |
Mch11g0982 | 948 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 | 687 | 767 | - | - | |
Mch11g0982 | 948 | SUPERFAMILY | HAD-like | 594 | 783 | IPR036412 | - | |
Mch11g0982 | 948 | Coils | Coil | 36 | 56 | - | - | |
Mch11g0982 | 948 | CDD | GT20_TPS | 97 | 562 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Mch11g0982 | 948 | Pfam | Glycosyltransferase family 20 | 97 | 562 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Mch11g0982 | 948 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Mch11g0982 | 948 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 621 | 692 | - | - | |
Mch11g0982 | 948 | Gene3D | Glycogen Phosphorylase B; | 344 | 546 | - | - | |
Mch11g0982 | 948 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 83 | 943 | IPR001830 | GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(PANTHER)|GO:0005992(InterPro)|GO:0070413(PANTHER) | |
Mch11g0982 | 948 | MobiDBLite | consensus disorder prediction | 31 | 51 | - | - | |
Mch11g0982 | 948 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 | 89 | 343 | - | - | |
Mch11g0982 | 948 | Gene3D | - | 687 | 767 | - | - | |
Mch11g0982 | 948 | CDD | HAD_TPP | 595 | 799 | - | - | |
Mch11g0982 | 948 | MobiDBLite | consensus disorder prediction | 26 | 51 | - | - | |
Mch11g0982 | 948 | Pfam | Trehalose-phosphatase | 620 | 802 | IPR003337 | GO:0005992(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g0982 | Mch-Chr11:6719969 | Mch3g1040 | Mch-Chr3:14029602 | 0 | dispersed | |
Mch11g0982 | Mch-Chr11:6719969 | Mch4g0135 | Mch-Chr4:891787 | 1.14E-133 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g0982 | K16055 | - | csv:101204478 | 1755.73 |