Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0982 ATGCCTGGGAATAAGTATAACGGTAATTCAAAAGACATTTCAGACCATATTCCAGGTCGAGTGGAAAGACTCTTGCGAGAGAGAAAGCTAAGGAAAAAAAGCAGTAAGGATTCATATTCGAACGAGGTAAACGAGTACAGTAAGGATTCTTCTGAACTAATTGAAAATGACCTTCGTTTGAAAGAAGAAGAAAGCCCTGGAGTTTCCTCTAAATTTCTGGAAGCTTCTATAGCCTCAAGGGCCTATGGCGAAGGATGTGAAAACCAAGAGGGGAAGCCTCCTCGACAACGATTGTTGGTTGTGGCCAATAGGCTGCCTGTCTCTGCAGTTAGGAGAGGTGAAGATTCTTGGTCTCTGGAGATCAGTGCTGGAGGTCTAGTGAGTGCACTTCTTGGCGTAAAGGAATTTGAAGCGAGATGGATTGGTTGGGCTGGTGTAAATGTGCCAGACGAGGTAGGACAAAAGGCACTGACTGAAGCTTTGGCTGAAAAGAGGTGTATCCCTGTTTTCCTTGATGAAGAGATTGTTCATCAATACTACAATGGTTATTGTAACAACATTTTATGGCCTTTATTTCATTACCTTGGACTTCCTCAAGAAGATCGTCTTGCCACCACCCGTAGCTTTCAGTCTCAGTTTGCCGCATATAAGAAGGCAAACCAAATGTTTGCTGATGTTGTTAACAAGCACTATGAGGAGGGTGATGTTGTGTGGTGCCATGATTACCATCTTATGTTTCTTCCAAAATGTCTCAAAGAACATAATAGCAAGATGAAAGTCGGCTGGTTTCTCCATACACCTTTTCCTTCTTCTGAAATCCACAGGACCCTTCCATCCCGATCAGAGCTTTTGCGCTCGGTACTTGCTGCTGATCTGGTTGGCTTCCACACATATGATTATGCTCGTCATTTTGTAAGTGCTTGTACTCGTATTCTTGGACTCGAGGGTACACCTGAAGGAGTTGAGGATCAAGGAAAACTAACGCGAGTTGCTGCATTCCCTATTGGTATAGACTCAGATCGATTCGTACGTGCTCTCAAGATCCCTGAAGTCCAAGAACATATTGAAGAGTTGAAGGAAAGATTCAAAGGCCGGAAGGTAATGTTAGGTGTTGATCGGCTTGATATGATTAAGGGAATACCTCAAAAGATATTAGCATTTGAAAAGTTCTTGGAGGAAAACCCTATTTGGCGTGATAAAGTTGTTTTGCTGCAAATTGCAGTGCCAACAAGAACAGACGTGCCAGAATATCAAAAGCTTACGAGTCAGGTTCATGAGATAGTTGGACGCATTAATGGGAGATTTGGAACTTTGACTACTGTGCCTATACATCATCTGGATCGCTCCCTTGATTTTCATGCATTATGTGCTCTATATGCTGTTACTGACGTAGCACTTGTCACATCTTTGAGGGATGGAATGAATCTTGTCAGCTATGAGTTTGTTGCTTGCCAGGATGCAAAGAAAGGGGTTTTAATTCTTAGCGAGTTTGCTGGCGCTGCACAATCTCTGGGTGCTGGAGCCCTTCTGGTCAACCCCTGGAACATAACAGAAGTCGCAAAATCAATCGATCGAGCATTAAATATGGATGCTGAAGAAAGAGAAAAGCGCCATAGGCACAATTTTCTCCATGTGACAACACACACTGCCCAGGAATGGGCAGAAACTTTTGTGAGTGAACTCAATGATACTGTGGTTGAAGCTGAACTGAGGATAAGACAAGCTCCACCCCCACTTCCATTCAACAATGCAATCAAACATTATGAGCAATCTACCAATCGATTACTTATACTAGGGTTCAATGCAACACTAACTGAACCAGTGGACACGCCCGAGAGAAGAGGCGATCAGATTAGAGAAATGGAACTGAAGCTGCACCCGGATCTGAAAGAACCATTGACAGCAATTTGCAACGACGAGAATACGACAGTAGTCATCCTCAGTGGGAGTGACAGAACTGTCTTGGATGATAACTTTGGAGAGTACGACATGTGGTTGGCAGCGGAGAATGGGATGTTTCTACGCTTCACAAGAGGAGACTGGATGACCACAATGCCTGAGCATTTGAATATGGAATGGGTCGACAGTGTGAAGCATGTTTTTGAGTACTTCACAGAGAGAACTCCCCGTTCCCATTTTGAGCTCCGGGAAACTTCGCTTGTTTGGAACTACAAATATGCAGATGTCGAGTTTGGAAGGCTTCAAGCAAGGGATATGTTGCAGCATCTGTGGACAGGTCCAATTTCCAATGCATCAGTTGATGTTGTTCAAGGTAGCCGATCTGTCGAGGTCCGAGCGGTTGGCGTTACCAAGGGATCAGCAATTGACCGAATACTGGGAGAAATAGTTCACAGCAAGTCCATGACGACTCCAATAGACTATGTCCTGTGTGTCGGCCACTTTCTTGGGAAGTTCAGGATTGTATTTTTTAGCCCTCAAACTCATTTAAATCATTTGTGTCATCAGGATGAAGATGTCTACACCTTCTTTGAGCCCGAGCTTCCATCGGATACCATAGGAATGGCAAGAACCAGAGGAACTGACGGACTTAAGTTAACTGGTGAGAGAAGATCTTCCATTAAAGTTCCTCTAAATAGGAATGGGTCGAGATCGCCTCACAATAAGGCGCGGTCGAATTCGGAGAAGAAAAATTCGAATCATAACTGTGCAAACGGTCGTAAGCCATCTCCAGAGAAGATCCAATGGAATGTGCTTGATCTCAAGGCCGAGAACTACTTCTCTTGTGCTGTTGGACGAACTCGGACGAATGCTCGGTATCTACTTGGATCGTCAGATGATGTCGTGGCGTTCCTAAAGGAGTTGTCAAGTGCAAATGCATCTTCT 2844 44.23 MPGNKYNGNSKDISDHIPGRVERLLRERKLRKKSSKDSYSNEVNEYSKDSSELIENDLRLKEEESPGVSSKFLEASIASRAYGEGCENQEGKPPRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTEALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKEHNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFVRALKIPEVQEHIEELKERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPIWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTTVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDAKKGVLILSEFAGAAQSLGAGALLVNPWNITEVAKSIDRALNMDAEEREKRHRHNFLHVTTHTAQEWAETFVSELNDTVVEAELRIRQAPPPLPFNNAIKHYEQSTNRLLILGFNATLTEPVDTPERRGDQIREMELKLHPDLKEPLTAICNDENTTVVILSGSDRTVLDDNFGEYDMWLAAENGMFLRFTRGDWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFELRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGSAIDRILGEIVHSKSMTTPIDYVLCVGHFLGKFRIVFFSPQTHLNHLCHQDEDVYTFFEPELPSDTIGMARTRGTDGLKLTGERRSSIKVPLNRNGSRSPHNKARSNSEKKNSNHNCANGRKPSPEKIQWNVLDLKAENYFSCAVGRTRTNARYLLGSSDDVVAFLKELSSANASS 948
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6719969 6736836 - MC11g0806 Mch11g0982 679916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0982 948 Gene3D - 621 781 IPR023214 -
Mch11g0982 948 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 96 565 - -
Mch11g0982 948 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 344 546 - -
Mch11g0982 948 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 97 562 IPR012766 GO:0003825(InterPro)|GO:0005992(InterPro)
Mch11g0982 948 Gene3D Glycogen Phosphorylase B; 89 343 - -
Mch11g0982 948 MobiDBLite consensus disorder prediction 862 896 - -
Mch11g0982 948 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 687 767 - -
Mch11g0982 948 SUPERFAMILY HAD-like 594 783 IPR036412 -
Mch11g0982 948 Coils Coil 36 56 - -
Mch11g0982 948 CDD GT20_TPS 97 562 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Mch11g0982 948 Pfam Glycosyltransferase family 20 97 562 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Mch11g0982 948 MobiDBLite consensus disorder prediction 1 20 - -
Mch11g0982 948 FunFam Alpha,alpha-trehalose-phosphate synthase 621 692 - -
Mch11g0982 948 Gene3D Glycogen Phosphorylase B; 344 546 - -
Mch11g0982 948 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 83 943 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(PANTHER)|GO:0005992(InterPro)|GO:0070413(PANTHER)
Mch11g0982 948 MobiDBLite consensus disorder prediction 31 51 - -
Mch11g0982 948 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 89 343 - -
Mch11g0982 948 Gene3D - 687 767 - -
Mch11g0982 948 CDD HAD_TPP 595 799 - -
Mch11g0982 948 MobiDBLite consensus disorder prediction 26 51 - -
Mch11g0982 948 Pfam Trehalose-phosphatase 620 802 IPR003337 GO:0005992(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0982 Mch-Chr11:6719969 Mch3g1040 Mch-Chr3:14029602 0 dispersed
Mch11g0982 Mch-Chr11:6719969 Mch4g0135 Mch-Chr4:891787 1.14E-133 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0982 K16055 - csv:101204478 1755.73