Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0987 ATGATGATGTTAGTAGCTCCAATTGCTCTTCTGGTTGTTCTTTCATTAATTATTTCTTGTTCTCCCACCATTCTTACTCCTAGTCTACCTCTCGACGAAGTGGAAGGCTTAGAGTACGTGGGAAAGAGGCTGGGAAAGAGGGACTGGAAATTTAATGAAAATCCATGCAGTGAAGAAGAATCTAGCTGGAAATCTGCAGATGCAAAGGATGGCAGTGGTTTCAAAAATAACGTCACATGCAATTGCTCATATGCTAGTGCTACCGTCTGCCACGTCACCCACATAATTCTGAAGTCGCAGAGTTTGCCGGGAACACTGCCGCCGGAGCTCTTCAGGTTGCCTTATCTGGAGGAACTCGATCTCACTCGAAACTATCTTAGCGGCGAAATTCCTCCACAATGGGGCTCTACGAACCTCATCAAAATTTCCCTGCTCGGAAATCGGTTGACGGGTTCGGTTCCGGAAGAGATTGGAAATATTTCTACTCTCAGAGAGTTGGTCCTAGAAATGAATCACTTGTCCGGAAGCTTGCCTCTAGCTCTTGGAAAATTGTCGAACTTGGAAAGATTACTTCTTGCCTCGAACAACTTCACCGGGGAGCTGCCGGAGTCTCTGGGAATGCTTACCTCTCTAACCGGATTCCGAATCAGTGACAATAACTTTGCAGGACCAATACCCAGTTTCATCCAGAATTGGGCAAATATTAGTCTAATAATAATTCAGGCAAGTGGGCTGAGTGGGCCTATTCCTCCTGAAATCGGACTTTTGAAAAACTTAACCGACCTGAGAATAAGTGACTTGAATGGAGCCTCATCACCCTTTCCATCGCTTAATAATTTGACTAATATGCAAAACCTAGTATTGAGAAATTGCAACATAACCGGAGCCCTGCCTGACAATTTCGGTGGGATGGAATCTTTGAAGCTTATAGACCTCAGCTTTAACAAAATAAGTGGGCGTATCCCTCCCAGTTTCCATAATCTTGTCGGAGTGGATAGAATATTTTTAACTGGAAACTTGCTAAATGGAGATGTTCCTCAGTGGATGCAGACTGAAGGATTGAACATTGATCTCTCTTATAACAAATTTTCACCAGTCTATACGAGCTGTCATTCACAACATTTGAACCTGTTTGCAAGCTCTTCACTGGACAATAATTCTAACCATGTAGCTTGTTTGGGGAAGAACTTCATTTGTGAACAAGCTCAGTACCATCTCCAGATAAATTGTGGTGGGGAGGACGTAATCATTAACGATGTATTGTTTGAAGGAGATAAAGATAAAGTCAACCCATCAGAGTTTGTCTCAAGTAAAACAAATTGGTTAGGCAGCAATACTGGCATGTTTTTGGACAATGAGCGCAAAAACGACGAGCTTTTTGCTGTGAATTCATCTGCACTGTCTATGATAAATTCCAAACTGTATGAGACTGCTCGAGTGTCTCCTGTGTCTCTTACATACTATATGTACTGCATGGCAATTGGAAACTACACGATAAGCCTCCATTTTGCAGAAATAATGTTTACTAATGATAAAAGTTATCGCAGCCTTGGAAGACGTCTTTTTGATGTTTATGTGCAGGGAAGACGGGTGCTGAAGGATTTTAATATTGCAGATGCTGCAGGAGGTGTAGGTAAACCTTTCATAAAAAAGATTCCCATTGCTATTACTAGTGGTACTTTGGAGATACGATTTTTTTGGACTGGGAAGGGGACAACTGCTATCCCTACGAGGGGAGTCTATGGTCCTCTGATTTCAGCCATTTCAGTTGTTTCTGACTCTGAGCCTCCATCAGAAGGTCGACATACCTTACCTGCAGGTGCAATTGTTGGAATTTTGGCTGCAGTGGCCTTTGTTATAATTTTGGCTCTTGGAATTTTATGGTGGGGAGGTTGTCTTGGAAGAAAAAGTACAGATCGACAAGATTTGAAGGGTCTAAATCTGCAAATTGGTTCATTTACATTAAAGCAAATCACAACTGCGACAAATAACTTTGACATTTCCAATAAGATAGGGGAAGGTGGTTTTGGGCCTGTTTATAAGGGTCGTCTCTTGGATGGCACCATGATTGCAGTGAAACAACTTTCTGCAAGATCACAACAAGGAAACCGCGAATTTGTGAATGAGATAGGCTTGATATCTTCTTTGCAACACCCAAATCTTGTTAAACTTTATGGATGCTGTACTGAAGGAGATCAACTTTTGCTAGTATATGAATTTATGGAAAATAATAGCCTTGCTCAAGCTCTCTTTGGAGCTCAAGGATGTCAATTGAAGCTGGATTGGCCAACAAGGCAAAAGATTTGTATTGGTATAGCCAAAGGTTTGGCTTTTCTTCACGAGGAGTCAAGATTGAAGATTGTTCATCGAGATATCAAAGCTACTAATGTATTGTTAGATAAAAATCTCAACCCCAAGATATCTGACTTTGGTTTGGCCAAGCTTCATGAAGAGGAAAACACCCATATAAGCACTCGAGTTGCTGGAACATTTGGATATATGGCACCCGAATATGCAACACGAGGCTACTTAACTGAGAAAGCAGATGTCTATAGCTTCGGTGTCGTGGCATTGGAAATAGTTAGTGGAAGGAGCAACACTATATATCGGTCAAAGGATAAGTGCCTTTATCTTCTTGATTGGGCACTTGTGTTGAAAGAGCAAGGCAGTTTAATGGAGCTCGTCGATCCAAAGTTAGGCTCCAACTTCGACCAGGAAGAGACGATGGCAATGATCAAAATTGCTTTGCTCTGCACCAATGTCTCTCCCTCAGCGAGACCTACCATGTCCTCGGTGGTGAGCATGCTGGAAGGTAAGGCTGCTGTCAAGGAGTTGGTTTCAGATCCTGATGACATGAGAAAAGAGATGAGCGCAATGTGGACCCTTATTCAGCAGAATGAGAAAATAACCGACAACGAGAACAAGGAAGAGAATCCATTGTTTATGGACATGCCAAGTACCAGTTCTTCGACATCGATAAAGAGTAGAAGCTAG 2994 42.18 MMMLVAPIALLVVLSLIISCSPTILTPSLPLDEVEGLEYVGKRLGKRDWKFNENPCSEEESSWKSADAKDGSGFKNNVTCNCSYASATVCHVTHIILKSQSLPGTLPPELFRLPYLEELDLTRNYLSGEIPPQWGSTNLIKISLLGNRLTGSVPEEIGNISTLRELVLEMNHLSGSLPLALGKLSNLERLLLASNNFTGELPESLGMLTSLTGFRISDNNFAGPIPSFIQNWANISLIIIQASGLSGPIPPEIGLLKNLTDLRISDLNGASSPFPSLNNLTNMQNLVLRNCNITGALPDNFGGMESLKLIDLSFNKISGRIPPSFHNLVGVDRIFLTGNLLNGDVPQWMQTEGLNIDLSYNKFSPVYTSCHSQHLNLFASSSLDNNSNHVACLGKNFICEQAQYHLQINCGGEDVIINDVLFEGDKDKVNPSEFVSSKTNWLGSNTGMFLDNERKNDELFAVNSSALSMINSKLYETARVSPVSLTYYMYCMAIGNYTISLHFAEIMFTNDKSYRSLGRRLFDVYVQGRRVLKDFNIADAAGGVGKPFIKKIPIAITSGTLEIRFFWTGKGTTAIPTRGVYGPLISAISVVSDSEPPSEGRHTLPAGAIVGILAAVAFVIILALGILWWGGCLGRKSTDRQDLKGLNLQIGSFTLKQITTATNNFDISNKIGEGGFGPVYKGRLLDGTMIAVKQLSARSQQGNREFVNEIGLISSLQHPNLVKLYGCCTEGDQLLLVYEFMENNSLAQALFGAQGCQLKLDWPTRQKICIGIAKGLAFLHEESRLKIVHRDIKATNVLLDKNLNPKISDFGLAKLHEEENTHISTRVAGTFGYMAPEYATRGYLTEKADVYSFGVVALEIVSGRSNTIYRSKDKCLYLLDWALVLKEQGSLMELVDPKLGSNFDQEETMAMIKIALLCTNVSPSARPTMSSVVSMLEGKAAVKELVSDPDDMRKEMSAMWTLIQQNEKITDNENKEENPLFMDMPSTSSSTSIKSRS 997
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6778675 6804975 - MC11g0808 Mch11g0987 679921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0987 997 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 634 740 - -
Mch11g0987 997 Pfam Protein tyrosine and serine/threonine kinase 667 936 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0987 997 MobiDBLite consensus disorder prediction 981 997 - -
Mch11g0987 997 ProSiteProfiles Protein kinase domain profile. 665 946 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0987 997 Gene3D - 401 595 - -
Mch11g0987 997 SUPERFAMILY L domain-like 75 347 - -
Mch11g0987 997 Gene3D Phosphorylase Kinase; domain 1 633 740 - -
Mch11g0987 997 Gene3D Transferase(Phosphotransferase) domain 1 741 958 - -
Mch11g0987 997 CDD STKc_IRAK 671 938 - -
Mch11g0987 997 Gene3D Ribonuclease Inhibitor 266 380 IPR032675 -
Mch11g0987 997 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 30 268 - -
Mch11g0987 997 Pfam Malectin domain 406 588 IPR021720 -
Mch11g0987 997 SUPERFAMILY Protein kinase-like (PK-like) 646 937 IPR011009 -
Mch11g0987 997 MobiDBLite consensus disorder prediction 967 997 - -
Mch11g0987 997 Pfam Leucine rich repeat 282 341 IPR001611 GO:0005515(InterPro)
Mch11g0987 997 Gene3D Ribonuclease Inhibitor 40 265 IPR032675 -
Mch11g0987 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0987 997 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 954 IPR051824 -
Mch11g0987 997 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 403 593 - -
Mch11g0987 997 SMART serkin_6 665 936 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0987 997 FunFam Putative LRR receptor-like serine/threonine-protein kinase 741 948 - -
Mch11g0987 997 Pfam Leucine Rich Repeat 186 207 IPR001611 GO:0005515(InterPro)
Mch11g0987 997 Pfam Leucine Rich Repeat 116 135 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0987 Mch-Chr11:6778675 Mch11g0990 Mch-Chr11:6833388 0 dispersed
Mch11g0986 Mch-Chr11:6769180 Mch11g0987 Mch-Chr11:6778675 1.12E-34 tandem
Mch11g0987 Mch-Chr11:6778675 Mch11g0988 Mch-Chr11:6806011 6.03e-313 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77068 PF07714 PK_Tyr_Ser-Thr 2.40E-49 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0987 - - - 0.0