Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0990 ATGGTTCTGGCTCGACTCCTCGCGGTTTCTCTCTTCGCTCTCTGCTTCGTAAGCCTCGCTTCCGGAGCCGGCCGGTTGCCGCTCGACGAAGTTGATGCCTTGCGAGAGATCGGAGATACATTGGGGAAGACGGACTGGAATTTCGACGCCGATCCGTGCGGCGGCCAGGGTTCCGGTTGGATATCTCAATCGAACCAATTCGATTTGAATTTTGTTAATAATGTCACCTGCAACTGCACGTTCATCAATGGCACCGTCTGCCACGTCACCAGGATTCTTCTCAAGGCGCAGAGCCTTCCAGGTACACTGCCACCACAAATAGTCAGGTTGCCTTTCCTGGAAGAACTTGATCTGACCCGCAACTATCTCAGTGGCCGAATTCCTCCAGAATGGGGTTCCACCAAGCTTGTCAAAATTTCCCTTCTTGGAAATCGGTTGACAGGTCCAATCCCAAAGGAGATTGGAAACATCAGCACTCTCACAGATTTGGTCCTGGAAATGAATCAGTTATCTGGGAGTATACCTCCAGAACTTGGAAATTTGACCAGTTTATCAAGATTACTTCTTACCTCAAACAACTTTTCTGGGGAGCTACCACCTTCACTGGCAAGGATAACCTCATTGACGGACTTTCGAATCAGTGATAATCACTTCTCAGGGCCAATACCTAAATTTATTCAGAATTGGACGAATCTTGGAAAAGTAGCTATTCAGGCAAGCGGGTTGAGTGGGCCAATTCCTTCCGAAATTGAACTTTTGACAAAATTAACTGATGTGAGAATCAGTGATTTGACTGGAGCTTCGTCACCCTTTCCACCCCTAAATGCTTTGAAAAATTTGAAAGTCCTGATATTGAGGAATTGCAATATAACTGGGGTGCTGCCGAACAATCTTGAGGGGATTTCAGCTTTGAAAACCTTAGACTTCAGCTTCAACAAAATAACCGGCCAAATACCTGCCAACTTTGAAGGTTTAAAAAAAGTGGATAGCATATATTTGAGTGGGAACTTGCTGAATGGATCAGTGCCTCCTTGGATGCTACAGCAAGGAGAAAGCATTGATCTCTCTTATAACAAATTTACTTCGACAAATGTTCAGAGCACTGGTTGTCAGTCACGAAACACAAACCTGTTTGCAAGCTCTTCACAAGATAATAATTCCAATGGAGCTGTTTCATGTTTATCGGGCTCCACTTGTGGAAAACCTCGGTACTTTCTATATATCAATTGCGGTGGGGGCCAAGTATCAATTAATGGAACAAAGACATTTGAAGCAGACATAAATACTGGAAAATCATCGTTGTTTGCTTCATCTGGGGCTGGAAATTGGGGATTTAGCAACACTGGAAATTTTATGGATGATGATCGCACGACAGATGACTTTATTGCACTAAATTCATCAACTCTCTCAATGCCAAATCCTGAACTGTACATGAAAGCGCGCATTTCTCCAATCTCTCTTACTTATTATGCATATTGCATGGGAAATGGAAACTACACAGTAAGCCTTCATTTTGCTGAGGTTGTGTTTACTAGTGACAAATCGTACAGAAGCCTTGGTAGACGCATATTTGATGTCTACGTTCAGGGAAAGCTGGAGTTGAAGGATTTTAATATTGCAGATGCAGCAGGTAGTGCTGGCAAACCTATTGTGAAGAAATTCACTGTTTCTGTGACTAACGGTACTATAGAGATCCGCTTATTTTGGGCTGGGAAGGGAACAAATGCAATCCCTGTGAGAGGAAGTTACGGTCCTTTAATTTCAGCCATTTCTGTTGATCCTGACTTTGTGCCACCATCAGAAGGTGGAAAATCCATATCTCCCGGTGCAGTGGTTGGAATTGTGTTTGCTGTGGCCTTTGTTATCTTCTTGGTTCTTGGAGTCCTGTGGTGGAGAGGCTGCCTAAGAAAGAAAAGCACACTAGAACAAGAGTTGGCGGGTCTAGATCTAGGAACAGGTTCATTTTCATTGAGACAAATCAGAGCTGCCACTAACAATTTTGATGCTGTCAATAAGATCGGAGAAGGTGGTTTTGGTCCTGTTTACAAGGGTGTTCTTGCAGATGGCACTGTAATTGCAGTGAAGCAACTTTCTTCAAAATCGAAGCAAGGAAATCGTGAATTCGTGAATGAGATAGGCATGATATCTGCATTGCAGCACCCTCATCTAGTGAAGCTCTATGGATGTTGTATTGAAGGAAATCAACTTTTGCTGGTGTATGAGTACCTGGAAAATAATAGCCTTGCTCGTGCCTTATTCGGACCTCAAGAATGTCAACTGAAATTGGATTGGCCAACAAGGCACAAGATTTGTGTTGGTATAGCCAGAGGTTTAGCATATCTTCACGAGGAGTCCAGATTAAAGATCGTCCACAGAGACATCAAAGCTACCAATGTTTTGCTAGATAAAAATCTAAACCCCAAGATTTCCGACTTCGGTTTGGCCAAGCTTGATGAAGAAGAAAATACACACATCAGCACCCGGGTCGCTGGAACCTTCGGGTATATGGCACCAGAATATGCAATGCGAGGCTACTTAACTGACAAAGCAGATGTTTACAGCTTCGGTATCGTGGCGTTAGAAATAGTCAGTGGTCGAAGCAACACAAGTTACCGAACCAAGGACGATTGCTTTTACCTTCTTGACCATGCTAATACTTTAAAAGAGAAAGACAGTTTAATGGAGCTAGTCGATCCACGGTTAGGCTCTGACTTCAACAGGACAGAGGCGATCGCGATGATCAATGTTGCTCTCCAATGCACCAACGTCGTTTCTGCAGACAGACCCGCCATGTCATCAGTGGTGAGCATGCTGGAAGGGAAGGTTGCTGTGAAGGAGGTGGTTTCAGACCCCAGTATCTCAAAACAAGATATGAATGCGATGTGGAGCCAGATTTATCGCCAGAAAGGACAAACGACAGGCGAGAGCCAGACGCAAAGTATGTCGATGGATGGACCATGGACTGGTTCTTCAACAAATGCCAGTGATCTCTATCCCATCAACATGGATTCTAAATACTTGGAGAATAGGAACTAG 3036 44.1 MVLARLLAVSLFALCFVSLASGAGRLPLDEVDALREIGDTLGKTDWNFDADPCGGQGSGWISQSNQFDLNFVNNVTCNCTFINGTVCHVTRILLKAQSLPGTLPPQIVRLPFLEELDLTRNYLSGRIPPEWGSTKLVKISLLGNRLTGPIPKEIGNISTLTDLVLEMNQLSGSIPPELGNLTSLSRLLLTSNNFSGELPPSLARITSLTDFRISDNHFSGPIPKFIQNWTNLGKVAIQASGLSGPIPSEIELLTKLTDVRISDLTGASSPFPPLNALKNLKVLILRNCNITGVLPNNLEGISALKTLDFSFNKITGQIPANFEGLKKVDSIYLSGNLLNGSVPPWMLQQGESIDLSYNKFTSTNVQSTGCQSRNTNLFASSSQDNNSNGAVSCLSGSTCGKPRYFLYINCGGGQVSINGTKTFEADINTGKSSLFASSGAGNWGFSNTGNFMDDDRTTDDFIALNSSTLSMPNPELYMKARISPISLTYYAYCMGNGNYTVSLHFAEVVFTSDKSYRSLGRRIFDVYVQGKLELKDFNIADAAGSAGKPIVKKFTVSVTNGTIEIRLFWAGKGTNAIPVRGSYGPLISAISVDPDFVPPSEGGKSISPGAVVGIVFAVAFVIFLVLGVLWWRGCLRKKSTLEQELAGLDLGTGSFSLRQIRAATNNFDAVNKIGEGGFGPVYKGVLADGTVIAVKQLSSKSKQGNREFVNEIGMISALQHPHLVKLYGCCIEGNQLLLVYEYLENNSLARALFGPQECQLKLDWPTRHKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLNPKISDFGLAKLDEEENTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNTSYRTKDDCFYLLDHANTLKEKDSLMELVDPRLGSDFNRTEAIAMINVALQCTNVVSADRPAMSSVVSMLEGKVAVKEVVSDPSISKQDMNAMWSQIYRQKGQTTGESQTQSMSMDGPWTGSSTNASDLYPINMDSKYLENRN 1011
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6833388 6843129 - MC11g0809 Mch11g0990 679924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0990 1011 Gene3D Phosphorylase Kinase; domain 1 633 742 - -
Mch11g0990 1011 ProSiteProfiles Protein kinase domain profile. 667 953 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0990 1011 SUPERFAMILY L domain-like 69 383 - -
Mch11g0990 1011 SUPERFAMILY Protein kinase-like (PK-like) 652 959 IPR011009 -
Mch11g0990 1011 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 27 265 - -
Mch11g0990 1011 MobiDBLite consensus disorder prediction 969 996 - -
Mch11g0990 1011 Gene3D Ribonuclease Inhibitor 267 379 IPR032675 -
Mch11g0990 1011 Pfam Leucine rich repeat 279 338 IPR001611 GO:0005515(InterPro)
Mch11g0990 1011 Pfam Leucine Rich Repeat 160 181 IPR001611 GO:0005515(InterPro)
Mch11g0990 1011 Pfam Leucine Rich Repeat 113 132 IPR001611 GO:0005515(InterPro)
Mch11g0990 1011 SMART serkin_6 667 938 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0990 1011 Gene3D Ribonuclease Inhibitor 29 266 IPR032675 -
Mch11g0990 1011 Gene3D Transferase(Phosphotransferase) domain 1 743 958 - -
Mch11g0990 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0990 1011 Pfam Malectin domain 406 590 IPR021720 -
Mch11g0990 1011 Gene3D - 402 594 - -
Mch11g0990 1011 FunFam Putative LRR receptor-like serine/threonine-protein kinase 743 950 - -
Mch11g0990 1011 CDD STKc_IRAK 673 940 - -
Mch11g0990 1011 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 10 956 IPR051824 -
Mch11g0990 1011 Pfam Protein tyrosine and serine/threonine kinase 670 937 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0990 1011 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 403 595 - -
Mch11g0990 1011 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 636 742 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0985 Mch-Chr11:6756616 Mch11g0990 Mch-Chr11:6833388 0 dispersed
Mch11g0987 Mch-Chr11:6778675 Mch11g0990 Mch-Chr11:6833388 0 dispersed
Mch11g0988 Mch-Chr11:6806011 Mch11g0990 Mch-Chr11:6833388 6.58E-303 dispersed
Mch11g0990 Mch-Chr11:6833388 Mch11g0992 Mch-Chr11:6867261 6.21E-257 dispersed
Mch2g1912 Mch-Chr2:19619078 Mch11g0990 Mch-Chr11:6833388 4.11E-29 dispersed
Mch11g0989 Mch-Chr11:6820649 Mch11g0990 Mch-Chr11:6833388 1.66E-269 tandem
Mch11g0990 Mch-Chr11:6833388 Mch11g0991 Mch-Chr11:6854818 1.44E-238 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77071 PF07714 PK_Tyr_Ser-Thr 2.40E-47 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0990 - - - 0.0