Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0991 TCCATGTTGGGAAACCGGCTCAGTGGCCAGATTCCTCCAGAAATTGGCGACATCGCAACACTTGAGCATCTGGTCTTGGAAGACAATCGGCTTGGAGGAAATCTTCCTGAAAGCCTCGGGAAACTGACCCGCTTGCAAAGATTACTTCTTACTGCAAATAATTTCACCGGGCCGATTCCAGACACTTATGGAAACTTGAGGAACTTGACTGATTTTCGGATAGATGGAAATGATGTATCGGGAAAGCTTCCTGAATTTATTGGCAATTGGACCAAACTTGAAAGGCTGGATATTCAAGGAACTTCTATGGAGAACCCCATTCCTCGTGCCATATCCGAGTTGAAAAACTTAACTGAACTGAGGATAACTGACTTGAAGGGACCAGCAACTAGTTTTCCGAATTTGACTCAATTGACATCTTTACAGGAATTGGTCCTAAGAAATTGCTTAATCGAGGATCGTATTCCTGGATATATCGGTCAGTTTAATGCATTAAAAACTTTAGATCTAAGCTTCAACAGATTGAGTGGTCCAATTCCAGACACATTTCAGAATCTAGAAAGAGTTACTCGGTTCTTATTTCTGACCAACAACTCATTAAGTGGCCAAGTACCAAGCTGGATTTTGAACAGTGAAAGGAGCATAGATTTATCTTACAACAATTTTACAGGGTCCCCTGTTTCCAGTTGTCAACAGTCTGATGTGAACTTGGTTTCCAGTTATTCAACTACAATGAATGATACTGTTGCTTGGTGCCTGAGGAAGGATCTCCCTTGCCCTAGGGAAGCTCGATTTCATTCCTTGTTCATAAATTGTGGAGGACTGAGGATGGAGGTTGATGGTAATGAATATGAAGAGGATGTGACTATGGGTGGCAAGTCCAATTTTCTTTCTTTTTCTGAAAGATGGGCTTATAGCAGTACTGGTGTTTTCCTGGGAAAAGAGGATGCTGATTACAGAGCATCAAGTAGCAATGTATCTGCTTCAAGCATCTACACAACTGCTCGACTCGCACCGCTTTCGCTGAAGTACTATGGACTTTGCTTACGGAGAGGAAGTTACAATGTGAAGCTTCACTTTGCTGAAATAATGTATACTGCAGATGAAACTTTCAGCAGCTTGGGAGAGCGCATATTTGATATCTCAATTCAAGGAAATTTGGTTAGAAAAGATTTTAACATAATGAAGGAAGCTGGAGGTGTTGGTAAGGACTTTATTCTAGAAGAGCCTAATATTCTAGTCAATGGCAGTACTCTTGAGATCCACTTATATTGGGCTGGTAAAGGAACAACAGCCATTCCAAACAGAGGGGTGTATGGACCTCTCATATCTGGGATCAGTGTCACTCCAAACTTTGATGTGGAGACCGGAGCGCTATCAGCTGGGGCTATTGCTGGCATTGTTGTTGGCATTTTTGTGTTCGTTGTGTTAGTGTTGGCTATTCTCCGATGGAAAGGTTACTTGGGCGGAAAGGACACTGAAAACAGCGAATTGCGGGCCCTAGATTTACAAACAGGTTATTTCAGTTTAAGACAAATCAGAGCAGCCACCAACAACTTCGACTCGACATATAAGATAGGCGAGGGAGGTTTTGGTCCAGTGTACAAGGGAGTATTGTCGGATGGTACTTCAATTGCTGTAAAGCAGCTATCCTCCAAATCACGGCAAGGAAACCGTGAATTCGTCACTGAGATTGGGATGATATCTGCATTACAACATCCAAATCTTGTTAAGCTTTATGGTTGTTGTATTGAAGGAAACCAGTTGTTGCTTATATATGAGTATCTAGAGAACAATAGTCTTGCCCGTGCACTTTTTGGCCCCGAGGAGCACCGACTTCACTTGGATTGGCCGAGAAGAATGAAGATATGCTTGGGAATAGCAAAGGGATTGGCTTACCTTCATGAAGAATCTAGATTGAAAATTGTTCACAGAGATATAAAAGCTACCAATGTGCTACTTGATAAAAGTTTGAATGCCAAGATTTCTGACTTTGGGTTGGCTAGGCTTGATGAAGAGGAGAACACCCATATCAGCACAAGAATTGCTGGCACAATAGGTTACATGGCTCCCGAGTATGCGATGAGAGGTTACTTGACTGATAAAGCCGATGTTTACAGCTTCGGAGTTGTGGCCTTAGAGATTGTTAGTGGGAAAAGTAACACAAATTACAGGCCAAAGGAAGAATTTGTTTACCTTCTTGATTGGGCTTATGTTCTACAAGAGCAAGGAAACCTTCTCGAACTTGTCGACCCGAGTCTCGACTCACATTACTCGAAAGAAGAGGTGATGAGGATGATTCACATAGCTCTCTTATGCACAAACCCGTCTCCGACTTTAAGACCATCCATGTCTTCTGTGGTCAGCATGCTCGAAGGCAAAATTGCTGTTCAAGCACCAATCATCAAGCGCAATGCAGCCGATCAAGATGCAAGGTTCAAAGCCTTTGAGAGGCTGTCTCAAGACAGCATAACAGGCATTTCGACATCGTCGCAAGGCATTCAGATGCAAAGAAGCATGTTAGTCGACGGGCCGTGGATCGACTCCTCTACTTCTACTCAAAACAAGGAT 2571 42.86 SMLGNRLSGQIPPEIGDIATLEHLVLEDNRLGGNLPESLGKLTRLQRLLLTANNFTGPIPDTYGNLRNLTDFRIDGNDVSGKLPEFIGNWTKLERLDIQGTSMENPIPRAISELKNLTELRITDLKGPATSFPNLTQLTSLQELVLRNCLIEDRIPGYIGQFNALKTLDLSFNRLSGPIPDTFQNLERVTRFLFLTNNSLSGQVPSWILNSERSIDLSYNNFTGSPVSSCQQSDVNLVSSYSTTMNDTVAWCLRKDLPCPREARFHSLFINCGGLRMEVDGNEYEEDVTMGGKSNFLSFSERWAYSSTGVFLGKEDADYRASSSNVSASSIYTTARLAPLSLKYYGLCLRRGSYNVKLHFAEIMYTADETFSSLGERIFDISIQGNLVRKDFNIMKEAGGVGKDFILEEPNILVNGSTLEIHLYWAGKGTTAIPNRGVYGPLISGISVTPNFDVETGALSAGAIAGIVVGIFVFVVLVLAILRWKGYLGGKDTENSELRALDLQTGYFSLRQIRAATNNFDSTYKIGEGGFGPVYKGVLSDGTSIAVKQLSSKSRQGNREFVTEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNSLARALFGPEEHRLHLDWPRRMKICLGIAKGLAYLHEESRLKIVHRDIKATNVLLDKSLNAKISDFGLARLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLDSHYSKEEVMRMIHIALLCTNPSPTLRPSMSSVVSMLEGKIAVQAPIIKRNAADQDARFKAFERLSQDSITGISTSSQGIQMQRSMLVDGPWIDSSTSTQNKD 857
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6854818 6861092 + MC11g0810 Mch11g0991 679925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0991 857 Gene3D Transferase(Phosphotransferase) domain 1 596 814 - -
Mch11g0991 857 SUPERFAMILY Protein kinase-like (PK-like) 504 796 IPR011009 -
Mch11g0991 857 Gene3D Ribonuclease Inhibitor 1 125 IPR032675 -
Mch11g0991 857 Gene3D Ribonuclease Inhibitor 126 256 IPR032675 -
Mch11g0991 857 ProSiteProfiles Protein kinase domain profile. 520 802 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0991 857 Pfam Malectin domain 268 446 IPR021720 -
Mch11g0991 857 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 489 595 - -
Mch11g0991 857 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 59 126 - -
Mch11g0991 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0991 857 Pfam Leucine Rich Repeat 21 42 IPR001611 GO:0005515(InterPro)
Mch11g0991 857 Pfam Leucine Rich Repeat 165 186 IPR001611 GO:0005515(InterPro)
Mch11g0991 857 Gene3D Phosphorylase Kinase; domain 1 489 595 - -
Mch11g0991 857 SMART serkin_6 520 791 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0991 857 Gene3D - 266 451 - -
Mch11g0991 857 FunFam Putative LRR receptor-like serine/threonine-protein kinase 596 803 - -
Mch11g0991 857 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 133 225 - -
Mch11g0991 857 Pfam Protein tyrosine and serine/threonine kinase 524 791 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0991 857 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 265 451 - -
Mch11g0991 857 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 817 IPR051824 -
Mch11g0991 857 CDD STKc_IRAK 526 793 - -
Mch11g0991 857 SUPERFAMILY L domain-like 4 226 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0991 Mch-Chr11:6854818 Mch4g0077 Mch-Chr4:524273 1.80E-235 dispersed
Mch9g0825 Mch-Chr9:6190429 Mch11g0991 Mch-Chr11:6854818 2.50E-73 dispersed
Mch11g0990 Mch-Chr11:6833388 Mch11g0991 Mch-Chr11:6854818 1.44E-238 tandem
Mch11g0991 Mch-Chr11:6854818 Mch11g0992 Mch-Chr11:6867261 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77072 PF07714 PK_Tyr_Ser-Thr 6.60E-50 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0991 - - - 0.0