Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0992 ATGGATCTTTCTACTTGGGAATGGGAATTGAAGAGTGTTCGTGTTCGTGCTCGTGTTCATGTTCTCATCTGCTGCTGGTTCCTGCTTTTCAACTGCTTCTTGGATTTTGGATCGGATGCCCAATCTTTGCCTCAACAAGAAGTGAGAGCCCTTGAAGCAATATCTGCAGAGCTCAAGAACTTAAATTGGAAGGTCCACAAAAATTCATGCATCAATGGCGACGGCTTTTCCAATATGGTTTGGAATCAAACTCATATGAGAGAGGTGAACTGCAGTTGTACCACTATTTGCAGCGTCACCAGCATCCGGCTAAAGAGGCTCAATCTAGTTGGAGTTCTTCCCACAGCATTCGCAAATCTGACTCGATTGCAGGAGCTAGATCTCACTTACAATCTTATATCTGGACAAATCCCTAGGGAGTTTGCTCGCATTCCTTTTGTTCGTTTGTCCATGCTGGGAAACCAACTCAGTGGTCTGATTCCTCCAGAAATTGGTGATATTTCTTCGCTTCAGGAACTGGTCTTGGAAGGCAATCAGCTTGTAGGAAATCTTCCTGAAAATCTCGGAAAACTGAGCAACTTGCGGAGACTACTTCTTTCCTCAAATAATTTCTCAGGGTCGATTCCAGCATCTTATGGAAACTTGAGGAACTTGACTGATTTCCGGATTGATGGAAATGATGTATCAGGAAAGCTACCCGAATTTATTGGCAACTGGACCAAACTTGAGATACTAGAAATTCAAGGAACGTCTATGGAGAATCCTATTCCTCGTGCTATTTCCGAGTTGAAAACTTTAACTGAACTGAGGATAACTGATTTGAAGGGACCACGGATAAGTTTTCCCAATTTGACTCTACTGACATCTTTAAACATATTGGTCCTAAGAAATTGCTTAATTGAGGATACAATCCCCAGATATATTGGACAGTTTAATCGACTAAAAACTTTAGATTTAAGCTTCAACAGATTGACTGGTCCAATTCCAAATTCATTCGAGAGGCTATTGGAAGTTACTCGGTTCCTGTTTCTGACCAACAACTCATTAAGTGGTCAAGTACCAAGCTCGATTGTTAACAGCAAAGCGAACATAGATTTATCTTACAACAATTTTACAGGGCCGCCCGTTTCAGTTTGTCAACAGTCTAATGTGAACTTGGTTTCTAGTCATTCGACTACAAGGAATGAAACGGTTCTTTGGTGCCTAAGGAAGGATCTCCCTTGCTCTAGAGAAGCTCGATTTCATTCATTGTTCATAAATTGTGGAGGACAAAGCTTGAAGATTGATGGTAGTGACTACGAAGAGGATGTTACTCAGGGTGGCAAATCCAATTTCGTTTCTTTCTCAGAAAGATGGGGTTACAGCAGCGGTATTTTCTTGGATGACAATGACGACATTCCTTACACAGTAAGTAGCAACGTGTCTTCTTTAGGAATCTATGGGACAGCACGACTCGCGCCTCTTTCACTCAAATACTATGGATTTTGCTTGCGGAGAGGAAGTTACAATGTGAAGCTTCACTTTGCTGAAATAATGTTTACTGCAGACCAAAAGTTCAGCAGCTTGGGGAAGCGCATCTTTGATATCTCAATTCAAGGAAACTTGGTTCGTAAAGATTTTAACATAATGGAAAATGCTGGAGGTGTTGGTAAGAGCTATATTCTTGAAGAGCCTAATATTATAGTCAATGGAAGCACTCTTGAGATCCACTTGTATTGGGCTGGTAAAGGAACAAATGCCATTCCGGAGAGAGGGGTATATGGACCTTTGATATCTGCAATCACCGTGACATCGAATTCTGATGTGGAGAGTAGAGGGCTGCTATCAGCTGGAGCTATTGCTGGCATTGTTGTTGGTTCATTTGCATTCTTTGTGTTAGTATTGATTGTTCTTCGAAGGAAGGGTTGCTTGGGCAATAAGGATACTGAAGACAAAGAATTGCGGGCCATAGATTTAAGGACGGGTTATTTCAGTTTAAGACAAATTAAAGCAGCCACCAACAACTTTGACTCGGCATGTAAGATAGGCGAGGGAGGGTTTGGTCCAGTGTACAAGGGAGTACTGTTGGATGGAACTTCGGTTGCCGTAAAACAGCTATCCTCTAAATCAAGGCAAGGGAACCGTGAATTCATCACTGAAATCGGCATGATATCTGCATTACAACATCCGAATCTGGTCAAGCTTTATGGTTGTTGTATTGAAGGAAACCAGTTATTGCTTATTTACGAGTATTTAGAGAACAATTGTCTTGCTCGTGCTCTTTTTGGCTCGGAGGAGAATGCACTGCATTTGGATTGGCCGATAAGAATGAAGATATGCTTGGGAATAGCAAAGGGATTGGCTTACCTTCATGAAGAATCTAGATTGAAAATTGTTCATAGAGATATAAAAGCTACCAATGTATTACTTGATAAAAGTCTGAATGCCAAGATTTCTGACTTTGGATTGGCTAAGCTTGATGAAGAGGAGAACACCCATATCAGCACAAGAATTGCTGGCACAATAGGTTACATGGCTCCTGAGTATGCATTGAGGTGTTATTTGACTGATAAAGCTGACGTTTATAGCTTTGGAATCGTAGCTCTAGAGATTGTTAGTGGGAAAAGTAACACAAATTACAGGCCAAAAGAAGAGTTTGTTTATCTTCTTGACTGGGCTTACGTTCTCCGAGAGGAGGGACTTGTTGATCCGAGTCTCGACTCACATTACTCGAAAGAAGAGGTGACGAGGATGCTTCATATAGCTCTGTTATGCACGAACCTGTCTCCTACTCTCAGGCCATCCATGTCTTCCGTGGTTAGCATGCTCGAAGGTAAAATTGCGATTGAAGTAGCGAACATCAAGTGCAACACAGCCGACCGAGATGCAAGGTTCAAAGCTTTCGAGAAGCTATCACAAGACAGCCAAACCAGCATTTCAACATCTTCGCAAGGCATTCAGATGCAGAGAAGCATGCTAATCGATGGACCATGGATTGACTCATCATCTACTTCTACCCAAAACAAGGACGAGGCTCGAGAGTATTCTTCAACCAGAAGTCTTCTT 3045 41.94 MDLSTWEWELKSVRVRARVHVLICCWFLLFNCFLDFGSDAQSLPQQEVRALEAISAELKNLNWKVHKNSCINGDGFSNMVWNQTHMREVNCSCTTICSVTSIRLKRLNLVGVLPTAFANLTRLQELDLTYNLISGQIPREFARIPFVRLSMLGNQLSGLIPPEIGDISSLQELVLEGNQLVGNLPENLGKLSNLRRLLLSSNNFSGSIPASYGNLRNLTDFRIDGNDVSGKLPEFIGNWTKLEILEIQGTSMENPIPRAISELKTLTELRITDLKGPRISFPNLTLLTSLNILVLRNCLIEDTIPRYIGQFNRLKTLDLSFNRLTGPIPNSFERLLEVTRFLFLTNNSLSGQVPSSIVNSKANIDLSYNNFTGPPVSVCQQSNVNLVSSHSTTRNETVLWCLRKDLPCSREARFHSLFINCGGQSLKIDGSDYEEDVTQGGKSNFVSFSERWGYSSGIFLDDNDDIPYTVSSNVSSLGIYGTARLAPLSLKYYGFCLRRGSYNVKLHFAEIMFTADQKFSSLGKRIFDISIQGNLVRKDFNIMENAGGVGKSYILEEPNIIVNGSTLEIHLYWAGKGTNAIPERGVYGPLISAITVTSNSDVESRGLLSAGAIAGIVVGSFAFFVLVLIVLRRKGCLGNKDTEDKELRAIDLRTGYFSLRQIKAATNNFDSACKIGEGGFGPVYKGVLLDGTSVAVKQLSSKSRQGNREFITEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNCLARALFGSEENALHLDWPIRMKICLGIAKGLAYLHEESRLKIVHRDIKATNVLLDKSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYALRCYLTDKADVYSFGIVALEIVSGKSNTNYRPKEEFVYLLDWAYVLREEGLVDPSLDSHYSKEEVTRMLHIALLCTNLSPTLRPSMSSVVSMLEGKIAIEVANIKCNTADRDARFKAFEKLSQDSQTSISTSSQGIQMQRSMLIDGPWIDSSSTSTQNKDEAREYSSTRSLL 1015
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6867261 6900463 + MC11g0811 Mch11g0992 679926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0992 1015 Gene3D Ribonuclease Inhibitor 269 401 IPR032675 -
Mch11g0992 1015 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 24 961 IPR051824 -
Mch11g0992 1015 Gene3D Transferase(Phosphotransferase) domain 1 745 952 - -
Mch11g0992 1015 Pfam Protein tyrosine and serine/threonine kinase 673 935 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0992 1015 Gene3D Phosphorylase Kinase; domain 1 636 744 - -
Mch11g0992 1015 ProSiteProfiles Protein kinase domain profile. 669 940 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0992 1015 Pfam Leucine Rich Repeat 193 215 IPR001611 GO:0005515(InterPro)
Mch11g0992 1015 Pfam Leucine Rich Repeat 313 335 IPR001611 GO:0005515(InterPro)
Mch11g0992 1015 Pfam Leucine Rich Repeat 122 142 IPR001611 GO:0005515(InterPro)
Mch11g0992 1015 Pfam Leucine Rich Repeat 169 191 IPR001611 GO:0005515(InterPro)
Mch11g0992 1015 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 638 744 - -
Mch11g0992 1015 Gene3D - 415 601 - -
Mch11g0992 1015 MobiDBLite consensus disorder prediction 990 1015 - -
Mch11g0992 1015 SMART serkin_6 669 936 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0992 1015 SUPERFAMILY L domain-like 85 371 - -
Mch11g0992 1015 Gene3D Ribonuclease Inhibitor 45 207 IPR032675 -
Mch11g0992 1015 FunFam Leucine-rich repeat receptor protein kinase EMS1 144 228 - -
Mch11g0992 1015 Pfam Malectin domain 417 594 IPR021720 -
Mch11g0992 1015 Gene3D Ribonuclease Inhibitor 208 268 IPR032675 -
Mch11g0992 1015 CDD STKc_IRAK 675 938 - -
Mch11g0992 1015 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 414 599 - -
Mch11g0992 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 791 803 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0992 1015 SUPERFAMILY Protein kinase-like (PK-like) 655 951 IPR011009 -
Mch11g0992 1015 FunFam Putative LRR receptor-like serine/threonine-protein kinase 745 948 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1037 Mch-Chr10:7533418 Mch11g0992 Mch-Chr11:6867261 0 dispersed
Mch11g0990 Mch-Chr11:6833388 Mch11g0992 Mch-Chr11:6867261 6.21E-257 dispersed
Mch11g0992 Mch-Chr11:6867261 Mch3g1048 Mch-Chr3:14079822 1.65E-235 dispersed
Mch11g0991 Mch-Chr11:6854818 Mch11g0992 Mch-Chr11:6867261 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77073 PF07714 PK_Tyr_Ser-Thr 7.30E-49 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0992 - - - 0.0