Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1051 ATGTCTGATGTGGCGAGTATAGCAGAGGCAGTGGCTGCAAGGTTTAGTTCTTTGGAGCTTATTGGAAGAGGATCTTTTGGTGATGTCTACAAGGGGTTTGACAAGGAGCTTAACAAAGAAGTTGCCATCAAAGTTATTGATTTGGAAGAATCCGAGGACGAAATTGAGGATATTCAGAAGGAAATTTCTGTTTTGTCACAATGTCGATCACCCTACATTACTGAGTACTATGGTTCTTATCTCCACCAGACTAAGTTATGGATAATAATGGAATATATGGCTGGTGGCTCTGTTGCAGATTTGCTGCAGTCTGGTCCACCGCTCGATGAAATGTCAATTGCATGCATTCTACGTGATTTGCTGCATGCAATTGATTATTTGCATTGTGAAGGAAAAATTCACAGGGACATTAAAGCGGCAAATATATTGCTGAGTGAAAATGGTGATGTTAAGGTTGCAGATTTTGGTGTTTCTGCTCAATTAACGAGGACAATATCAAGACGAAAGACATTTGTGGGAACTCCATTCTGGATGGCACCGGAGGTAATTCAAAATTCTGAAGGATACAATGAGAAGGCAGATATCTGGTCTCTAGGAATCACTGCTATTGAGATGGCGAAAGGGGAGCCTCCACTTGCTGATCTTCATCCCATGAGAGTTCTTTTTATTATACCTCGAGAAAATCCACCTCAGTTGGATGAGCATTTTTCTCGCCCCATGAAAGAATTAGTGTCACTGTGTCTGAAGAAAATACCTGCTGAGAGACCCAGTGCCAAAGAGCTTCTGAAGCATCGCTTCATTAGGAATGCCAGGAAGAGTCCTAGGCTTCAGGAGAGAATAAGAGAACGTCCGAAATACCAAATTCCAAAGGATGAAGATGAAGAAACACCAACTAATGGTACTAGAGCAATAGGCGAAACGTCCGACACGGTAAAAGTATCGAGAAATACAAGAGAAGAAACTATTCATGCCAGCAACCAGAGTAAAACTCCTAAGAATGCTGGATGGGACTTTAGTATTGGGGGACCAAACAGTACGGGTACTGTTCGAAGTGTGGTAAAACCGCCTCAAATTAGGGAAAGAAAGCCAGACATTCCTTATGGTCAGGCTGCACCAAGCAGAATTCCAGAGAGTGGCAACTGGCTAGCTGCATCTGGAAATGCATCACGTGACGTAGCAGAAGATGCTAGAGATTCATACAATACGGGGGATGCGAGTGAAGATGAAGAGTTATCTGTAAGTGGTTCAGGAACTATCGTGATCCGGTCTCCCAAGGGATCTCAATCATCTGCTCAATTTCATAGTCAAAGCAGTCCGTCTGGAAATGCACAAACATATTTTGAGGACACACCTTTTAGTGGTACTGTTGTTATGCGTGGTCAACGTGATGATTCTGATTCTCCTCGGACTCCACTATCCAGATCGGGAATTCAAGAAAGGACTTCAAGTTTTTCCCCTGAAGATAGTGCAGTAAACCTCTCGGAGGCAAAGGCTGCGATTCAAGCAGGATTGAAAAAAGCTAATGCAAGGGAAAGATCAGCACATAAACTCAACGACAGGAAGGAAAATAGAAGGACAGAGCAAACAGTGAGTAGCTCTGACTCTTCGAGGCATTCTCGTGAATTCTTTGATGCACCAAGAGCATTGCCAAAGCCATCTCAATCAATTCATGATGATGAAAGTGCAAAAGTAGCATTATCTTCTGCACCTTTATCGAAATTGTTTATGCCATCCTTGAAAGAGGTAGTTGCTGATGACTCAGAAGGATCACCTGCTCGTGCTGTAATTAATGCACTTATAAATATGGAACACGTAAAACCTGGATCATGTGAGGTTCTTGTTACCAAGTTTCTACAGCAATTGGCCAGTTCAAAGGAAACTTCGTTGAAAGATTTACAAGACTTGGCAACTCGCTTGTTCGCCAAGATTAAGACAGTTCCTGTTTCCGAAGATACACAGAACGTTCCAGATTCTGATAGCAGCAAAAAGATACCCAACAGGGAACTTCATTCAAATTCTAATTTGAGCTCGCTCGCTAGATTTTTACTCTCCAGGTTT 2058 42.47 MSDVASIAEAVAARFSSLELIGRGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSPYITEYYGSYLHQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHCEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKELVSLCLKKIPAERPSAKELLKHRFIRNARKSPRLQERIRERPKYQIPKDEDEETPTNGTRAIGETSDTVKVSRNTREETIHASNQSKTPKNAGWDFSIGGPNSTGTVRSVVKPPQIRERKPDIPYGQAAPSRIPESGNWLAASGNASRDVAEDARDSYNTGDASEDEELSVSGSGTIVIRSPKGSQSSAQFHSQSSPSGNAQTYFEDTPFSGTVVMRGQRDDSDSPRTPLSRSGIQERTSSFSPEDSAVNLSEAKAAIQAGLKKANARERSAHKLNDRKENRRTEQTVSSSDSSRHSREFFDAPRALPKPSQSIHDDESAKVALSSAPLSKLFMPSLKEVVADDSEGSPARAVINALINMEHVKPGSCEVLVTKFLQQLASSKETSLKDLQDLATRLFAKIKTVPVSEDTQNVPDSDSSKKIPNRELHSNSNLSSLARFLLSRF 686
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7308079 7319584 - MC11g0862 Mch11g1051 679985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1051 686 MobiDBLite consensus disorder prediction 508 528 - -
Mch11g1051 686 Gene3D Transferase(Phosphotransferase) domain 1 12 303 - -
Mch11g1051 686 Coils Coil 41 68 - -
Mch11g1051 686 MobiDBLite consensus disorder prediction 650 669 - -
Mch11g1051 686 MobiDBLite consensus disorder prediction 273 299 - -
Mch11g1051 686 MobiDBLite consensus disorder prediction 406 451 - -
Mch11g1051 686 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g1051 686 MobiDBLite consensus disorder prediction 273 490 - -
Mch11g1051 686 MobiDBLite consensus disorder prediction 320 352 - -
Mch11g1051 686 CDD STKc_MST3_like 14 287 - -
Mch11g1051 686 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g1051 686 MobiDBLite consensus disorder prediction 470 490 - -
Mch11g1051 686 MobiDBLite consensus disorder prediction 503 560 - -
Mch11g1051 686 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 13 646 IPR050629 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)
Mch11g1051 686 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524(InterPro)
Mch11g1051 686 SUPERFAMILY Protein kinase-like (PK-like) 13 311 IPR011009 -
Mch11g1051 686 FunFam serine/threonine-protein kinase dst1 isoform X1 12 302 - -
Mch11g1051 686 SMART serkin_6 15 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1051 Mch-Chr11:7308079 Mch9g2066 Mch-Chr9:21755076 1.02E-74 dispersed
Mch11g1051 Mch-Chr11:7308079 Mch4g2219 Mch-Chr4:23817061 1.50E-60 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77074 PF00069 Pkinase 4.80E-68 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1051 K08838 - csv:101214412 1163.29