Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g1054 | ATGACTGGAAAAGAGATTCTCCACAAGATGAAGGAAAAAGTAGGGCTGGGTTCCTCGGACCCCGACTCCGGAAAAGGAAAGAGCAAGATGTCGAAGCATGTCACACATGGATTTCACTTGGTGGAAGGGAAATCACATCATGCCATGGAAGATTATGTGGTTGCAGAGTTTAAGCAAGTTGATCATCACGAGCTTGGTTTATTTGCAATCTTTGATGGCCATTTGAGCAATGCTATCCCCGATTATTTACAGTCAAATTTATTTTCTAATATTATAAACGAGCCCGATTTTTGGACAGATCCGAAGAATGCAGTAAGGAAAGCATATAGGGAAACTGACGCATACATTTTAGAGAAGGCTGTTGATTTTAGTCATGGGGGTTCAACTGCTGTTACAGCCATATTAATTGACTGTCAAATACTAGTAGTGGGCAACGTGGGGGACTCCCGTGCAGTTATCTGTAGGAACGGCAAGGCCAGTCAATTATCAGTCGATCACGAGCCAAGCGTTGAAAGAAAAAGCATCGAGAATAGAGGCGGTTTTGTAACAAATTTTCCTGGGGACGTTCCTCGTGTTGATGGGCAGTTGGCGGTTGCTAGGGCATTTGGTGACAGGAGCTTAAAGATTCACTTGAGCTCAGAGCCTGATGTGGTAGTGACGAAGATAGACGACGAGACTGAATTCGTTATCTTGGCAAGCGATGGATTGTGGAAGGTGATGTCGAACGAAGAAGCCGCAGAGTCCATCAGGCAAATAAAAGATGCTCGAGCGGCTGCCAAGCACCTGACAGAGGAGGCCCTCAAGAGAAAGAGCAAAGATGATATTTCCTGTATAGTTGTGAGATTTCAGTGA | 852 | 44.84 | MTGKEILHKMKEKVGLGSSDPDSGKGKSKMSKHVTHGFHLVEGKSHHAMEDYVVAEFKQVDHHELGLFAIFDGHLSNAIPDYLQSNLFSNIINEPDFWTDPKNAVRKAYRETDAYILEKAVDFSHGGSTAVTAILIDCQILVVGNVGDSRAVICRNGKASQLSVDHEPSVERKSIENRGGFVTNFPGDVPRVDGQLAVARAFGDRSLKIHLSSEPDVVVTKIDDETEFVILASDGLWKVMSNEEAAESIRQIKDARAAAKHLTEEALKRKSKDDISCIVVRFQ | 283 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7341252 | 7345545 | + | MC11g0865 | Mch11g1054 | 679988 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g1054 | 283 | ProSiteProfiles | PPM-type phosphatase domain profile. | 35 | 282 | IPR001932 | - | |
Mch11g1054 | 283 | Coils | Coil | 245 | 265 | - | - | |
Mch11g1054 | 283 | FunFam | Probable protein phosphatase 2C 39 | 25 | 283 | - | - | |
Mch11g1054 | 283 | SMART | PP2C_4 | 31 | 280 | IPR001932 | - | |
Mch11g1054 | 283 | Gene3D | - | 17 | 283 | IPR036457 | - | |
Mch11g1054 | 283 | CDD | PP2Cc | 43 | 282 | IPR001932 | - | |
Mch11g1054 | 283 | Pfam | Protein phosphatase 2C | 46 | 275 | IPR001932 | - | |
Mch11g1054 | 283 | PANTHER | PROTEIN PHOSPHATASE | 31 | 280 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Mch11g1054 | 283 | SUPERFAMILY | PP2C-like | 31 | 282 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g1054 | Mch-Chr11:7341252 | Mch1g2098 | Mch-Chr1:20339398 | 3.55E-82 | dispersed | |
Mch11g0475 | Mch-Chr11:3037149 | Mch11g1054 | Mch-Chr11:7341252 | 3.27E-61 | transposed | |
Mch11g0664 | Mch-Chr11:4336020 | Mch11g1054 | Mch-Chr11:7341252 | 1.63E-107 | transposed | |
Mch4g1826 | Mch-Chr4:21120484 | Mch11g1054 | Mch-Chr11:7341252 | 4.36E-60 | transposed | |
Mch11g1054 | Mch-Chr11:7341252 | Mch4g0141 | Mch-Chr4:940150 | 1.40E-132 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g1054 | K17506 | - | csv:101215129 | 496.123 |