Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1106 TCTTTCACTCCCATTGATAACTATTTGATAGCGTGTGGTTCTCCACAAAACATCACCTTCCAAGGGAGAACTTTCGTTCCTGATTCTGCACATTCTTTGCTTTCTGGGAGCTCTGTTGTTGTTGGTTCAAATGGTGCTGCTGCTCCGTCCCCAATCTATCAATCTGCCCGGGTTTTCACGAGCATTGCTTCCTACAGGTTCGAAATCAAGCAGGAAGGTCGACATTGGGTTCGGTTGTATTTTTATCCTATTCCGAAGTTGGGGCGAAATCTGTCGTCTGCTTCAATTACTGTTGTCACTGATAAGTTTGTGCTTTTGAACAACTTCACTTTCAAGAACTATAATGGTTCTTTTATGTTCAAGGAGTATGCGATCAATGTGACTTCTGATTCGTTGACCCTTACTTTCATCCCCTCGAATGATTCGGTTTCGTTTGTGAATGCGATCGAGGTTGTCTCGGTGCCTGAAGAGCTGCTCCCTGATCAAGCATTGGCGTTGAATCCGTCTGCTCCTTTTAGCGGTCTCTCAGTACTTGCTCTTGAGACTGTTTACAGGCTGAACATGGGCGGTCCTTTACTCACTTCGCAAAATGATACGCTTGCAAGGACTTGGGAGAATGATATGAAGTATCTCCATGTCAACAGTTCTGCAGTGAATGTCTCTGCCAGCCCAGCGAGCATAAAATATCATACTGGTGTTACACCAGAAACTGCACCGAATTGGGTTTATGCTACGGCCGATGCCATGGGCGACCCGAATGTAGCGAACGTGAACTTCAATTTGACTTGGGTATTCTCAGTTGAGCCAAACTTTCAGTATTTTGTTCGAGTACATTTTTGTGATATAATGAGCAAGGCCCTCAATACCTTGGTTTTCAATCTTTACATAAACTCCGATAACGCTCTGAGAAGCTTTGATCTGTCGGCGATAACCGGTGACTTGGGCGTGCCTTATTATAAAGACTTCATTTCTAGTTCCACAGATTCGAATACTTTGACTGTTAGCGTTGGTCCAGATACAATGGCAGACATCACTAATGCCACCATGAATGGCTTGGAGATTATGAAGATAAGCAATCAAGCTGGGAGCTTGGATGGTACTTCATCGGTTGGAAGTCTTTTTCCAAATGCGCCCTCGAAGAAGAACAATATACCAATCATTGTTGGTTCTGTCTTGGCAGCGGTAGTAGTGCTTGCGTTACTCGTTTTGTGTTATTGCTGCTTCATAGGTCGCAGGGGTAAGACTACTCAACCAGCTCACCCATGGCTGCCTTTGCCCTTATATGGAAACTCTCAAACCATGACAAAAGTGTCAACGACTTCCCAAAAGAGTGGAACTGCAAGTTTCATTTCTTTGGCTTCCTCTAGTCTTGGCAGATTATTCTCATTTCAGGAAATCCTTGATGCTACCAACAAATTCGATGAAAACCTGCTCCTTGGAGTTGGCGGTTTTGGTCGGGTTTACAAGGGGACACTTGAAGATGGCATGAAAGTTGCTGTTAAAAGAGGTAACCCAAGATCAGAACAAGGCCTTGCCGAGTTTCGAACTGAAATAGAAATGTTGTCGAAGCTCCGACATCGTCACCTGGTGTCTCTTATTGGCTATTGTGATGAAAGATCAGAAATGATTCTTGTCTATGAATATATGGCAAATGGACCTCTCAGGAGTCATTTGTATGGAACCGATCTGCCTCCATTGTCGTGGAAGCAACGACTTGATATTTGCATTGGTGCTGCGAGGGGGCTTCATTATCTTCACACCGGCGCAGCTCAAAGCATAATACACCGAGATGTTAAGACCACAAACATTCTCTTGGACGAAAATTTTGTTGCCAAAGTTGCAGACTTTGGTCTTTCAAAAACTGGGCCATCTTTGGATCAGACTCATGTAAGCACTGCTGTCAAGGGTAGTTTTGGTTACCTTGATCCGGAATACTTCAGGCGACAACAGCTTACCGAGAAGTCGGATGTGTACTCATTCGGTGTCGTGCTAATGGAAGTTCTTTGCACAAGGCCAGCGCTAAACCCGGTTCTTCCCAGAGAACAAGTCAATATAGCAGAATGGGCAATGACTTGGCAAAAGAAGGGCTTGCTAGACCATATCATGGACCCAAATCTGGTAGGGAAAGTTAATCCAGCATCGCTTAAGAAGTTCGGGGAAACAGCTGAGAAATGCCTTGCTGAGTATGGCGTTGACAGGCCATCGATGGGAGATGTCCTGTGGAACCTTGAATACGCTCTTCAGCTCGAGGAAACATCAACCGCTCTCATGGAGCCAGAAGACAACAGCACAAACCACATTCCTACCATCCAACTGACCCCACTTGAGCCGTTTGATAACAGCGTAAGCATGATCGATGGAGGGAACTCGAACTCTGGCACCGATGATGATGCAGAAGATGCTGCAACAAGTGCGGTATTTTCGCAGCTCGTAAATCCCCGTGGGAGA 2448 45.3 SFTPIDNYLIACGSPQNITFQGRTFVPDSAHSLLSGSSVVVGSNGAAAPSPIYQSARVFTSIASYRFEIKQEGRHWVRLYFYPIPKLGRNLSSASITVVTDKFVLLNNFTFKNYNGSFMFKEYAINVTSDSLTLTFIPSNDSVSFVNAIEVVSVPEELLPDQALALNPSAPFSGLSVLALETVYRLNMGGPLLTSQNDTLARTWENDMKYLHVNSSAVNVSASPASIKYHTGVTPETAPNWVYATADAMGDPNVANVNFNLTWVFSVEPNFQYFVRVHFCDIMSKALNTLVFNLYINSDNALRSFDLSAITGDLGVPYYKDFISSSTDSNTLTVSVGPDTMADITNATMNGLEIMKISNQAGSLDGTSSVGSLFPNAPSKKNNIPIIVGSVLAAVVVLALLVLCYCCFIGRRGKTTQPAHPWLPLPLYGNSQTMTKVSTTSQKSGTASFISLASSSLGRLFSFQEILDATNKFDENLLLGVGGFGRVYKGTLEDGMKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLDICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGLLDHIMDPNLVGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLEETSTALMEPEDNSTNHIPTIQLTPLEPFDNSVSMIDGGNSNSGTDDDAEDAATSAVFSQLVNPRGR 816
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7731521 7733968 + MC11g0909 Mch11g1106 680040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1106 816 Pfam Malectin-like domain 10 357 IPR024788 -
Mch11g1106 816 ProSitePatterns Protein kinases ATP-binding region signature. 479 501 IPR017441 GO:0005524(InterPro)
Mch11g1106 816 Gene3D Transferase(Phosphotransferase) domain 1 549 766 - -
Mch11g1106 816 FunFam receptor-like protein kinase FERONIA 434 548 - -
Mch11g1106 816 FunFam Receptor-like protein kinase FERONIA 179 359 - -
Mch11g1106 816 FunFam Putative receptor-like protein kinase 7 155 - -
Mch11g1106 816 ProSiteProfiles Protein kinase domain profile. 473 746 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g1106 816 MobiDBLite consensus disorder prediction 778 816 - -
Mch11g1106 816 CDD STKc_IRAK 479 744 - -
Mch11g1106 816 SUPERFAMILY Protein kinase-like (PK-like) 450 744 IPR011009 -
Mch11g1106 816 SMART serkin_6 473 746 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g1106 816 Gene3D Phosphorylase Kinase; domain 1 431 548 - -
Mch11g1106 816 MobiDBLite consensus disorder prediction 778 798 - -
Mch11g1106 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 593 605 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g1106 816 Gene3D - 178 359 - -
Mch11g1106 816 Gene3D - 7 154 - -
Mch11g1106 816 FunFam Receptor-like protein kinase FERONIA 549 765 - -
Mch11g1106 816 Pfam Protein tyrosine and serine/threonine kinase 479 670 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g1106 816 PANTHER OS07G0166700 PROTEIN 461 750 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0132 Mch-Chr10:776863 Mch11g1106 Mch-Chr11:7731521 1.34E-133 dispersed
Mch11g1106 Mch-Chr11:7731521 Mch6g0255 Mch-Chr6:1654735 9.10E-273 dispersed
Mch4g1610 Mch-Chr4:19309008 Mch11g1106 Mch-Chr11:7731521 1.89E-57 dispersed
Mch4g2583 Mch-Chr4:26233688 Mch11g1106 Mch-Chr11:7731521 9.85E-44 dispersed
Mch7g0644 Mch-Chr7:11087717 Mch11g1106 Mch-Chr11:7731521 2.48E-66 dispersed
Mch9g2158 Mch-Chr9:22287076 Mch11g1106 Mch-Chr11:7731521 6.92E-29 dispersed
Mch11g1106 Mch-Chr11:7731521 Mch9g0371 Mch-Chr9:2752302 1.98E-257 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77075 PF12819 Malectin_like 1.00E-38 CL0202 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1106 - - - 0.0