Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1115 ATGATGTTATCGGCGTCGCCTTCGACGATAGCTCGGAGCTCACTGGAGGAAATGCTTGATTCCCTCCGACGAAGGGATGAGATTGAGAAGCCTAAAGACTTGCCGCCTGCATTGCCGTCTCGGCCGATTTCGAGTGCTAAGATTCCCCCGGTGAGACGGGCTTTGCCCGTCAATTTCAGGGTAAGTGATGACGGTTCCTCAGAATGCTCGCTTAATGGCTTTAATGGAAGGGAAGATGCAATGAGGAAGGAGAATGGTTTGGGTAACTTTGGATTCAAGAGAATGAAGAGAGATCAAAACGACGAATCGCCTTACATGGTAGCTTCAGAAAATGATAATGGAGATCAAGTGGATGGCTCGAATGGTGCTTCAGTTTTACTGTCAAATATGGAGGACAGTATCAATTATTTTCTTCAGAAGAAACTCCGTGTCTGGTGTCGACTCCAAAATGGACAATGGGAGTTGGGAACTATACAATCAAATGCTGGTGAGGAGGCATCTGTCATACTCTCAAACAAAAAGGTTATTAAAGTTCCAATCATAGAGCTTGTACCGGCTAATCCAGATGTAGTAGCAGGGGTTGATGATCTTACGCAGCTTGGTTATTTGAACGAGCCCTCGGTTATTCACAGTCTCCGGCGACGATTTTCTCACGATAAGATTTATAGTAATGCAGGGCCAGTTTTGATTGCAGTCAATCCCTTGAAAGATGCTGAACAGTATGGAAATGAAATTATTACAGCCTATAGACAGAGAATCATGGACAGCCCTCACGTTTTTGCTACAGCAGATGCGGCCTATTCTGGGATGATGAAAGATGAAGTTAATCAATCCATTATCATCAGTGGTGAAAGTGGATCGGGGAAAACTGAGACAACAAAAGTTGCACTACAGTACCTGGCTGCTCTTGGTAGTGTCAGTATCGTAGATGATAGAATCCTACGGGCAAATTTTATACTGGAAGCATTTGGGAATGCTAAAACCTCAAGGAACAACAATGCCAGCAGATTTGGGAAGTTGATTGAAATTCTTTTTAGCAGAACAGGGAAGATGTCCGGTGCTGTAATCCAGACTTTTCTGTTGGAAAAGTCAAGAGTTGTTCAGCTGATCAATGGTGAGAGATCATTCCATGTCTTCTATCAACTTTGTGCCGGAGCGCCATCAACACTTAAAGAGAAATTGCATATCAAAATGGCTAGCAAGTACAGTTACCTTAATCAGAGTGAATGCCTGGTGATTGGTGGTGTTGACGATGCACGGAGATTTCACACTCTTGTGGAAGCCCTAGATATACTAAAATTCACTAAGGAAGATCAAGAGCATGCATTTGGTATGCTTGCTGCAGTTTTGTGGATAGGAAACATTTCGTTTCAAACAATTGATAGTGAAAATCATGTTGAGGTTGTCGCTGATGAAGCGGTTGCAAATGCTGCCAAGCTGATGGGTTGCAGTTTTAATGAGCTCAAGTTAGTCTTGTCAACCCACAAGGTGCAATCTGGCAAGGATAGCATTGCTGAAAAATCGACACTACGACAGGCAACCTATACAAGAGATGCATTGGCTAAATTTATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAGATCAATAAGTCACTTAAACCAGGAAGGCAGCATTCTGGAAGATCCATAAATATCCTCGACATCTATGGGTTTGAGTCATTTAAGGCATGTTATTCTATCAACTTTGTGTGTAAGAATGGCTTCGAACAATTTTGTATCAATTATGCAAATGAGAGATTGCAGCAGCATTTTATTCGGCATCAGTTCAAACTTCAGCAAGAGGATTATGAATTGAATGGAGTTGATATCACGAAAGTCAACTTCACAGACAATCAAGAGTGTCTGGATCTTATTGAGAAGAAACCTGTAGGAGTATTAGCTTTGTTGGACGAAGAGTTAAATTTTCCCAAGGCTACAGATCTGACATTTGCTAATAAACTGAAGCAGAACTTCAAATCTAATCCTTGCTTTAAAGGAGAAAGAGGTCGGGCTTTTGGTGTCCGCCATTATGCTGGAGAGGTTGTATATGACACAAATGGGTTTCTGGAGAAGAATAGAGATCTGCTGCATTCAGATTCCATCCAACTCTTTTCATCATGTACTTGCAAGTTACTGCAATTATTTGCCTCCAAAATGATTAACCATTCCCACAAACCAGCAGTTTCAATGTGCTCCACAGAAGAAGTAGAATCCCCCAAGCCAGGTGTTGGTACCAAGTACAAGGTTGTACTATTTGACCTATTTCATAAATTGGAGCGCACCGGCCATCACTTCATTTGTTGCATAAGGCCGAACCGGAACCAGGTTTGTGGTGTATTTGAGGATGACCTTGTCTTACAGCAGCTTAGGTACTGTGGAATTTTGGAGGTTGTTAGGACTTCAAGATCTGGGTATCCTACCAGAATTACACATCAAGAATTTGCTGGAAGGTATGGGTTCTTCCTTAAAGAAGCTGGTGTATCTCAAGATCCATTAAGCATATCGATTGCTGTTCTCCGACAATTCAATATCTACCCTGAAATGTACCATGTCGGTTATACCAAATTGTTTTTCCGTACCGGGCAGATTAGGGCATTGGAGGAAAGGAGGAAGCTGGTTCTGCAGGGGATCCTGGGGGTTCAAAAGTACTTCCGCGGTTCCCGCGCCCGTGACCACTTCTATGAACTTAAGCAAGGAGCCACTACCTTACAATCATTCATTCGTGGTGAAAACGCCAGAAGGAGATGTACCGTTAAGGTGAAGAGGTTCCCATTCACCGTGTACGCATTCAGTGTTCCTCAAAAGCGTAATGAACTGCGGGCAATCATAAGATTACAATCGGTAATACGTGGTTCGTTTGATCGGAAGCATTTTAAGAGCATGTGTGATTCGAAGGAGTATTTCCCTGAAAACAGAAAACTCAAACCAAACACAGGCAGGAGGATTTCAGAGGATAAATCTCAAGAACAGGTTCAAGCCCTGCCCACATCTCTGACCGAGCTTCAAAAGCGGGTACTCGCTGCAGAAGCAACCATTGAGAACAAGGAAGAGGAAAATGCTTCTCTGAGGGAGCAAGTAAAGCAATTCGAGGCAAGGCGGTTAGAATATGAAGCAAAGATGAAGTCCATGGAGGATATGTGGCAAAAGCAGATGGCATCTTTGCAGGTGAGTCTTGCTGCTGCTAAAAAGACTATTGCTGCTGAAAATGCACCACCTCACTACTATGATTCCGAAGATACATCTATGGGATCTCGAACTCATGGTGGTACCACACCTATGAAAGTTTCTGGAGTTTCTGAAGGCGGAGCAGGCCGAGAAATGAATGGTACTGTAGCTGCAGTGAACAATCTTGTAAAGGAATTTGAACAGAAAAGAACAACATTTGATGATGATGCCAAAGCTTTAGCTGAAGCAAAATCAGGCCAGGCACAGACCGGGGCCAATGTGAACCCAGATGAAGAATACCGTAAAGTTAAAGTCCGGTTCGAAGCGTGGAAAAAGGAGTACAAGGCCAGATTGCGGGAAACAAAAGCAAAGGTTCATAAAAATGGACATTCAGAAGTCGAAAAACTTCGTCGAAAATGGTGGGGGAAGTTGACC 3603 43.1 MMLSASPSTIARSSLEEMLDSLRRRDEIEKPKDLPPALPSRPISSAKIPPVRRALPVNFRVSDDGSSECSLNGFNGREDAMRKENGLGNFGFKRMKRDQNDESPYMVASENDNGDQVDGSNGASVLLSNMEDSINYFLQKKLRVWCRLQNGQWELGTIQSNAGEEASVILSNKKVIKVPIIELVPANPDVVAGVDDLTQLGYLNEPSVIHSLRRRFSHDKIYSNAGPVLIAVNPLKDAEQYGNEIITAYRQRIMDSPHVFATADAAYSGMMKDEVNQSIIISGESGSGKTETTKVALQYLAALGSVSIVDDRILRANFILEAFGNAKTSRNNNASRFGKLIEILFSRTGKMSGAVIQTFLLEKSRVVQLINGERSFHVFYQLCAGAPSTLKEKLHIKMASKYSYLNQSECLVIGGVDDARRFHTLVEALDILKFTKEDQEHAFGMLAAVLWIGNISFQTIDSENHVEVVADEAVANAAKLMGCSFNELKLVLSTHKVQSGKDSIAEKSTLRQATYTRDALAKFIYASLFDWLVEQINKSLKPGRQHSGRSINILDIYGFESFKACYSINFVCKNGFEQFCINYANERLQQHFIRHQFKLQQEDYELNGVDITKVNFTDNQECLDLIEKKPVGVLALLDEELNFPKATDLTFANKLKQNFKSNPCFKGERGRAFGVRHYAGEVVYDTNGFLEKNRDLLHSDSIQLFSSCTCKLLQLFASKMINHSHKPAVSMCSTEEVESPKPGVGTKYKVVLFDLFHKLERTGHHFICCIRPNRNQVCGVFEDDLVLQQLRYCGILEVVRTSRSGYPTRITHQEFAGRYGFFLKEAGVSQDPLSISIAVLRQFNIYPEMYHVGYTKLFFRTGQIRALEERRKLVLQGILGVQKYFRGSRARDHFYELKQGATTLQSFIRGENARRRCTVKVKRFPFTVYAFSVPQKRNELRAIIRLQSVIRGSFDRKHFKSMCDSKEYFPENRKLKPNTGRRISEDKSQEQVQALPTSLTELQKRVLAAEATIENKEEENASLREQVKQFEARRLEYEAKMKSMEDMWQKQMASLQVSLAAAKKTIAAENAPPHYYDSEDTSMGSRTHGGTTPMKVSGVSEGGAGREMNGTVAAVNNLVKEFEQKRTTFDDDAKALAEAKSGQAQTGANVNPDEEYRKVKVRFEAWKKEYKARLRETKAKVHKNGHSEVEKLRRKWWGKLT 1201
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 7790626 7799125 + MC11g0918 Mch11g1115 680049
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1115 1201 Gene3D - 374 433 - -
Mch11g1115 1201 Gene3D Kinesin motor domain 195 800 IPR036961 -
Mch11g1115 1201 Pfam IQ calmodulin-binding motif 941 960 IPR000048 GO:0005515(InterPro)
Mch11g1115 1201 Pfam IQ calmodulin-binding motif 900 917 IPR000048 GO:0005515(InterPro)
Mch11g1115 1201 Coils Coil 999 1047 - -
Mch11g1115 1201 ProSiteProfiles IQ motif profile. 939 967 - -
Mch11g1115 1201 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 139 188 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch11g1115 1201 CDD MYSc_Myo8 206 860 IPR036022 -
Mch11g1115 1201 Gene3D Myosin VI head, motor domain, U50 subdomain 435 740 - -
Mch11g1115 1201 FunFam Myosin IE heavy chain 431 539 - -
Mch11g1115 1201 MobiDBLite consensus disorder prediction 1072 1106 - -
Mch11g1115 1201 FunFam Myosin heavy chain 374 430 - -
Mch11g1115 1201 Gene3D - 560 762 - -
Mch11g1115 1201 Pfam Myosin head (motor domain) 194 860 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch11g1115 1201 PRINTS Myosin heavy chain signature 222 241 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch11g1115 1201 PRINTS Myosin heavy chain signature 612 640 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch11g1115 1201 PRINTS Myosin heavy chain signature 276 301 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch11g1115 1201 PRINTS Myosin heavy chain signature 318 345 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch11g1115 1201 PRINTS Myosin heavy chain signature 559 587 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch11g1115 1201 SMART MYSc_2a 186 873 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch11g1115 1201 Gene3D - 805 874 - -
Mch11g1115 1201 PANTHER MYOSIN 143 1196 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Mch11g1115 1201 ProSiteProfiles IQ motif profile. 897 925 - -
Mch11g1115 1201 MobiDBLite consensus disorder prediction 1080 1094 - -
Mch11g1115 1201 ProSiteProfiles Myosin motor domain profile. 192 872 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch11g1115 1201 MobiDBLite consensus disorder prediction 21 49 - -
Mch11g1115 1201 ProSiteProfiles IQ motif profile. 876 903 - -
Mch11g1115 1201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 920 IPR027417 -
Mch11g1115 1201 Gene3D - 878 923 - -
Mch11g1115 1201 SMART iq_5 938 960 IPR000048 GO:0005515(InterPro)
Mch11g1115 1201 SMART iq_5 896 918 IPR000048 GO:0005515(InterPro)
Mch11g1115 1201 SMART iq_5 873 895 IPR000048 GO:0005515(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1115 Mch-Chr11:7790626 Mch9g1662 Mch-Chr9:18689394 0 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1115 K10357 - csv:101210624 1905.18