Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch11g1115 | ATGATGTTATCGGCGTCGCCTTCGACGATAGCTCGGAGCTCACTGGAGGAAATGCTTGATTCCCTCCGACGAAGGGATGAGATTGAGAAGCCTAAAGACTTGCCGCCTGCATTGCCGTCTCGGCCGATTTCGAGTGCTAAGATTCCCCCGGTGAGACGGGCTTTGCCCGTCAATTTCAGGGTAAGTGATGACGGTTCCTCAGAATGCTCGCTTAATGGCTTTAATGGAAGGGAAGATGCAATGAGGAAGGAGAATGGTTTGGGTAACTTTGGATTCAAGAGAATGAAGAGAGATCAAAACGACGAATCGCCTTACATGGTAGCTTCAGAAAATGATAATGGAGATCAAGTGGATGGCTCGAATGGTGCTTCAGTTTTACTGTCAAATATGGAGGACAGTATCAATTATTTTCTTCAGAAGAAACTCCGTGTCTGGTGTCGACTCCAAAATGGACAATGGGAGTTGGGAACTATACAATCAAATGCTGGTGAGGAGGCATCTGTCATACTCTCAAACAAAAAGGTTATTAAAGTTCCAATCATAGAGCTTGTACCGGCTAATCCAGATGTAGTAGCAGGGGTTGATGATCTTACGCAGCTTGGTTATTTGAACGAGCCCTCGGTTATTCACAGTCTCCGGCGACGATTTTCTCACGATAAGATTTATAGTAATGCAGGGCCAGTTTTGATTGCAGTCAATCCCTTGAAAGATGCTGAACAGTATGGAAATGAAATTATTACAGCCTATAGACAGAGAATCATGGACAGCCCTCACGTTTTTGCTACAGCAGATGCGGCCTATTCTGGGATGATGAAAGATGAAGTTAATCAATCCATTATCATCAGTGGTGAAAGTGGATCGGGGAAAACTGAGACAACAAAAGTTGCACTACAGTACCTGGCTGCTCTTGGTAGTGTCAGTATCGTAGATGATAGAATCCTACGGGCAAATTTTATACTGGAAGCATTTGGGAATGCTAAAACCTCAAGGAACAACAATGCCAGCAGATTTGGGAAGTTGATTGAAATTCTTTTTAGCAGAACAGGGAAGATGTCCGGTGCTGTAATCCAGACTTTTCTGTTGGAAAAGTCAAGAGTTGTTCAGCTGATCAATGGTGAGAGATCATTCCATGTCTTCTATCAACTTTGTGCCGGAGCGCCATCAACACTTAAAGAGAAATTGCATATCAAAATGGCTAGCAAGTACAGTTACCTTAATCAGAGTGAATGCCTGGTGATTGGTGGTGTTGACGATGCACGGAGATTTCACACTCTTGTGGAAGCCCTAGATATACTAAAATTCACTAAGGAAGATCAAGAGCATGCATTTGGTATGCTTGCTGCAGTTTTGTGGATAGGAAACATTTCGTTTCAAACAATTGATAGTGAAAATCATGTTGAGGTTGTCGCTGATGAAGCGGTTGCAAATGCTGCCAAGCTGATGGGTTGCAGTTTTAATGAGCTCAAGTTAGTCTTGTCAACCCACAAGGTGCAATCTGGCAAGGATAGCATTGCTGAAAAATCGACACTACGACAGGCAACCTATACAAGAGATGCATTGGCTAAATTTATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAGATCAATAAGTCACTTAAACCAGGAAGGCAGCATTCTGGAAGATCCATAAATATCCTCGACATCTATGGGTTTGAGTCATTTAAGGCATGTTATTCTATCAACTTTGTGTGTAAGAATGGCTTCGAACAATTTTGTATCAATTATGCAAATGAGAGATTGCAGCAGCATTTTATTCGGCATCAGTTCAAACTTCAGCAAGAGGATTATGAATTGAATGGAGTTGATATCACGAAAGTCAACTTCACAGACAATCAAGAGTGTCTGGATCTTATTGAGAAGAAACCTGTAGGAGTATTAGCTTTGTTGGACGAAGAGTTAAATTTTCCCAAGGCTACAGATCTGACATTTGCTAATAAACTGAAGCAGAACTTCAAATCTAATCCTTGCTTTAAAGGAGAAAGAGGTCGGGCTTTTGGTGTCCGCCATTATGCTGGAGAGGTTGTATATGACACAAATGGGTTTCTGGAGAAGAATAGAGATCTGCTGCATTCAGATTCCATCCAACTCTTTTCATCATGTACTTGCAAGTTACTGCAATTATTTGCCTCCAAAATGATTAACCATTCCCACAAACCAGCAGTTTCAATGTGCTCCACAGAAGAAGTAGAATCCCCCAAGCCAGGTGTTGGTACCAAGTACAAGGTTGTACTATTTGACCTATTTCATAAATTGGAGCGCACCGGCCATCACTTCATTTGTTGCATAAGGCCGAACCGGAACCAGGTTTGTGGTGTATTTGAGGATGACCTTGTCTTACAGCAGCTTAGGTACTGTGGAATTTTGGAGGTTGTTAGGACTTCAAGATCTGGGTATCCTACCAGAATTACACATCAAGAATTTGCTGGAAGGTATGGGTTCTTCCTTAAAGAAGCTGGTGTATCTCAAGATCCATTAAGCATATCGATTGCTGTTCTCCGACAATTCAATATCTACCCTGAAATGTACCATGTCGGTTATACCAAATTGTTTTTCCGTACCGGGCAGATTAGGGCATTGGAGGAAAGGAGGAAGCTGGTTCTGCAGGGGATCCTGGGGGTTCAAAAGTACTTCCGCGGTTCCCGCGCCCGTGACCACTTCTATGAACTTAAGCAAGGAGCCACTACCTTACAATCATTCATTCGTGGTGAAAACGCCAGAAGGAGATGTACCGTTAAGGTGAAGAGGTTCCCATTCACCGTGTACGCATTCAGTGTTCCTCAAAAGCGTAATGAACTGCGGGCAATCATAAGATTACAATCGGTAATACGTGGTTCGTTTGATCGGAAGCATTTTAAGAGCATGTGTGATTCGAAGGAGTATTTCCCTGAAAACAGAAAACTCAAACCAAACACAGGCAGGAGGATTTCAGAGGATAAATCTCAAGAACAGGTTCAAGCCCTGCCCACATCTCTGACCGAGCTTCAAAAGCGGGTACTCGCTGCAGAAGCAACCATTGAGAACAAGGAAGAGGAAAATGCTTCTCTGAGGGAGCAAGTAAAGCAATTCGAGGCAAGGCGGTTAGAATATGAAGCAAAGATGAAGTCCATGGAGGATATGTGGCAAAAGCAGATGGCATCTTTGCAGGTGAGTCTTGCTGCTGCTAAAAAGACTATTGCTGCTGAAAATGCACCACCTCACTACTATGATTCCGAAGATACATCTATGGGATCTCGAACTCATGGTGGTACCACACCTATGAAAGTTTCTGGAGTTTCTGAAGGCGGAGCAGGCCGAGAAATGAATGGTACTGTAGCTGCAGTGAACAATCTTGTAAAGGAATTTGAACAGAAAAGAACAACATTTGATGATGATGCCAAAGCTTTAGCTGAAGCAAAATCAGGCCAGGCACAGACCGGGGCCAATGTGAACCCAGATGAAGAATACCGTAAAGTTAAAGTCCGGTTCGAAGCGTGGAAAAAGGAGTACAAGGCCAGATTGCGGGAAACAAAAGCAAAGGTTCATAAAAATGGACATTCAGAAGTCGAAAAACTTCGTCGAAAATGGTGGGGGAAGTTGACC | 3603 | 43.1 | MMLSASPSTIARSSLEEMLDSLRRRDEIEKPKDLPPALPSRPISSAKIPPVRRALPVNFRVSDDGSSECSLNGFNGREDAMRKENGLGNFGFKRMKRDQNDESPYMVASENDNGDQVDGSNGASVLLSNMEDSINYFLQKKLRVWCRLQNGQWELGTIQSNAGEEASVILSNKKVIKVPIIELVPANPDVVAGVDDLTQLGYLNEPSVIHSLRRRFSHDKIYSNAGPVLIAVNPLKDAEQYGNEIITAYRQRIMDSPHVFATADAAYSGMMKDEVNQSIIISGESGSGKTETTKVALQYLAALGSVSIVDDRILRANFILEAFGNAKTSRNNNASRFGKLIEILFSRTGKMSGAVIQTFLLEKSRVVQLINGERSFHVFYQLCAGAPSTLKEKLHIKMASKYSYLNQSECLVIGGVDDARRFHTLVEALDILKFTKEDQEHAFGMLAAVLWIGNISFQTIDSENHVEVVADEAVANAAKLMGCSFNELKLVLSTHKVQSGKDSIAEKSTLRQATYTRDALAKFIYASLFDWLVEQINKSLKPGRQHSGRSINILDIYGFESFKACYSINFVCKNGFEQFCINYANERLQQHFIRHQFKLQQEDYELNGVDITKVNFTDNQECLDLIEKKPVGVLALLDEELNFPKATDLTFANKLKQNFKSNPCFKGERGRAFGVRHYAGEVVYDTNGFLEKNRDLLHSDSIQLFSSCTCKLLQLFASKMINHSHKPAVSMCSTEEVESPKPGVGTKYKVVLFDLFHKLERTGHHFICCIRPNRNQVCGVFEDDLVLQQLRYCGILEVVRTSRSGYPTRITHQEFAGRYGFFLKEAGVSQDPLSISIAVLRQFNIYPEMYHVGYTKLFFRTGQIRALEERRKLVLQGILGVQKYFRGSRARDHFYELKQGATTLQSFIRGENARRRCTVKVKRFPFTVYAFSVPQKRNELRAIIRLQSVIRGSFDRKHFKSMCDSKEYFPENRKLKPNTGRRISEDKSQEQVQALPTSLTELQKRVLAAEATIENKEEENASLREQVKQFEARRLEYEAKMKSMEDMWQKQMASLQVSLAAAKKTIAAENAPPHYYDSEDTSMGSRTHGGTTPMKVSGVSEGGAGREMNGTVAAVNNLVKEFEQKRTTFDDDAKALAEAKSGQAQTGANVNPDEEYRKVKVRFEAWKKEYKARLRETKAKVHKNGHSEVEKLRRKWWGKLT | 1201 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 7790626 | 7799125 | + | MC11g0918 | Mch11g1115 | 680049 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch11g1115 | 1201 | Gene3D | - | 374 | 433 | - | - | |
| Mch11g1115 | 1201 | Gene3D | Kinesin motor domain | 195 | 800 | IPR036961 | - | |
| Mch11g1115 | 1201 | Pfam | IQ calmodulin-binding motif | 941 | 960 | IPR000048 | GO:0005515(InterPro) | |
| Mch11g1115 | 1201 | Pfam | IQ calmodulin-binding motif | 900 | 917 | IPR000048 | GO:0005515(InterPro) | |
| Mch11g1115 | 1201 | Coils | Coil | 999 | 1047 | - | - | |
| Mch11g1115 | 1201 | ProSiteProfiles | IQ motif profile. | 939 | 967 | - | - | |
| Mch11g1115 | 1201 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 139 | 188 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch11g1115 | 1201 | CDD | MYSc_Myo8 | 206 | 860 | IPR036022 | - | |
| Mch11g1115 | 1201 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 435 | 740 | - | - | |
| Mch11g1115 | 1201 | FunFam | Myosin IE heavy chain | 431 | 539 | - | - | |
| Mch11g1115 | 1201 | MobiDBLite | consensus disorder prediction | 1072 | 1106 | - | - | |
| Mch11g1115 | 1201 | FunFam | Myosin heavy chain | 374 | 430 | - | - | |
| Mch11g1115 | 1201 | Gene3D | - | 560 | 762 | - | - | |
| Mch11g1115 | 1201 | Pfam | Myosin head (motor domain) | 194 | 860 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch11g1115 | 1201 | PRINTS | Myosin heavy chain signature | 222 | 241 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch11g1115 | 1201 | PRINTS | Myosin heavy chain signature | 612 | 640 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch11g1115 | 1201 | PRINTS | Myosin heavy chain signature | 276 | 301 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch11g1115 | 1201 | PRINTS | Myosin heavy chain signature | 318 | 345 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch11g1115 | 1201 | PRINTS | Myosin heavy chain signature | 559 | 587 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch11g1115 | 1201 | SMART | MYSc_2a | 186 | 873 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch11g1115 | 1201 | Gene3D | - | 805 | 874 | - | - | |
| Mch11g1115 | 1201 | PANTHER | MYOSIN | 143 | 1196 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Mch11g1115 | 1201 | ProSiteProfiles | IQ motif profile. | 897 | 925 | - | - | |
| Mch11g1115 | 1201 | MobiDBLite | consensus disorder prediction | 1080 | 1094 | - | - | |
| Mch11g1115 | 1201 | ProSiteProfiles | Myosin motor domain profile. | 192 | 872 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch11g1115 | 1201 | MobiDBLite | consensus disorder prediction | 21 | 49 | - | - | |
| Mch11g1115 | 1201 | ProSiteProfiles | IQ motif profile. | 876 | 903 | - | - | |
| Mch11g1115 | 1201 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 172 | 920 | IPR027417 | - | |
| Mch11g1115 | 1201 | Gene3D | - | 878 | 923 | - | - | |
| Mch11g1115 | 1201 | SMART | iq_5 | 938 | 960 | IPR000048 | GO:0005515(InterPro) | |
| Mch11g1115 | 1201 | SMART | iq_5 | 896 | 918 | IPR000048 | GO:0005515(InterPro) | |
| Mch11g1115 | 1201 | SMART | iq_5 | 873 | 895 | IPR000048 | GO:0005515(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch11g1115 | Mch-Chr11:7790626 | Mch9g1662 | Mch-Chr9:18689394 | 0 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch11g1115 | K10357 | - | csv:101210624 | 1905.18 |