Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1127 CCTCTGATTTCTCTCATACCAACAACTCTGTTTCTACTTTCTTCTCTGGCTATGGCCGTCGATTTCTTGATACCTCCTCAAAACCTCACCAATGGCGCCACGTTGGTCTCGGAGAAGTCGATTTTCGAACTGGGTTTCTTCCGCCCTGGAAATTCCACCGGATTTTATCTAGGGATTTGGTACAAAATCATCCCGACTCACACAATCGTCTGGGTCGCCAACAGAGAGAGCCCCATCAACGATTCTTCGGCGGTTTTGAAGATAAACTCCACAGCCAGTTCTCTCGCTCTGACCCAGAACGGCGTCGTTGTCTGGTCATCGAAGCCGTTGAGGGCAGTGGAGAATCCCAAGCTCCAGCTCTTGGACAATGGAAATCTGGTTCTGAAAGACGCGGATTCAGGGGAGATTTCGTGGCAGAGCTTCGATTACCCGACGGACACGTTACTCCCCGGAATGAAACTGGGGTGGGATTTCAGAACAGGGATCCACCGGTGGCTATCGTCGTGGAGAAACTCCAACGACCCATCTCCGGGGAATTTCACGTTGGAAATGATGAAAACCGCGTACCCAGAACCGGTGATGTGGAACGGGTCGAAGGAGTTCATGAGGAGCGGGCCGTGGAACGGCCTTCAATTCAGCGCGAAACCCACATCGGCTCTCCCGATTTTGGTTTACCACTACGAGAATTCCAAAAACGAGCTCTCTTACAGCTACAACCTCATAAACTCGTCGCTAATCGGGAGAATGGTGATGAACGAGACCAAATCTCGGAGGGAGGTTCTGTTGTGGTCGGAATCGGAGAAGAATTGGAAGCTGTACGCGACGATGCCGAGGGATTACTGCGACACGTACGGCCTCTGTGGCGCGTTTGGGAGCTGCGATATTGAGGAAACGCCGGCCTGCCAATGTCTGAAAGGGTTTCGGCCGAGGGTTCAGGAGAAGTGGAATCTGATGGATTATACTGAAGGGTGCGTTCGAAATCGGCCGCTGAATTGCTCTGATGAAACTGGGTTCGCCATCTTTCCGGGGCTGAAATTGCCGGATACCAAACTTTCTTGGGTCAATGAGAGTATGAGCTTGACTGAGTGCAGAGAGAAATGTATGAGGAACTGTTCTTGTGTGGCTTTTGCGAATACTGATATTAGGGGATCGGGAAGTGGCTGTGCGATTTGGATTGGTGAGCTTATTGATATTAAAGTGGTTCACAGAGGGGGGCAGGATTTGTATGTTAGAATGCTGGCTTCTGAATTGGAGACTAAGAAGACGAGTTCGGTTGTCGTCGGGGTTATCATCGGAGCGGCAGTTCTTGCGATCGCGGGGCTGGTTTTGGTTGGGTTCTACCTTATCAGGAGCAGGAGAAGAAGCTTGGAAGGAACAGGCAAGGACCTTGAAGGGCAGGATGAGGACTTGGAGCTCCCATTGTTCGACTTAACAACCATATCGAGTGCCACGGACAATTTTTCGAACTCGAACAAGCTCGGAGAAGGCGGGTTCGGCGCAGTCTTTCGGGGTAGGCTTGTAGATGGACAAGAGATTGCAGTGAAGAGGCTTTCTAGCTATTCGAGACAAGGAACAGAGGAGTTCAAGAATGAAGTGATACTGATAGCCAAACTTCAGCATCGAAATCTTGTGAAGCTTTTAGGTTGCTGCATCCAAGGGGAGGAGAAGATGTTGATTTATGAGTACATGCCTAATAAGAGCTTGGACTCCTTCATATTTGATTCGGGTAGAAAGAAACTCTTAGATTGGAAGAAACGATTCAATATCATATGCGGAGTAGCGAGAGGAATTCTTTATCTTCATCAAGATTCAAGATTGAGGATCATACATAGGGATCTGAAAGCAAGCAACGTGTTGCTTGATATTGACATGAACCCGAAAATCTCGGATTTTGGAATGGCTAGAACTTTTGGGGGCGATCAGACAGAAGGAAATACTAGAAGAGTGGTTGGAACATATGGGTACATGGCACCAGAATATGCGATCGATGGACAATTTTCAATAAAATCCGATGTCTTTAGTTTCGGTATTTTATTGTTGGAGATCATAAGTGGCGAGAAGAATAGAGGATTCTTTCGTCCCAACTCTACTCTCAACCTTATTGGACATGCATGGAATTTATGGAACGAAGGCAAACCACTGGAGTTGATTGACGCAAGCATTGGAGAGTCGTATGCTCTATCTGAAGTGTTGCGGTGCATCCATGTGAGCCTTTTGTGCTTGCAGCAACATCCCGAGGCTAGACCGACCATGTCGAATGTGGTTCTAATGCTCAGCAGTGAGAGCACCTTGGCGCAGCCCAAACAACCAGGATTCTACATGGAAAGAGATTCTCTTGAACCAGATTCTCATTCGGGGTCCAAACAGACAACCAGTCAAGTTGTTGGCAAACCAAACGGAACCCAATGCAGAATGGCAAATTTTCCTCTGATGTCTATTGTTACGACTGTATTTTTATATTCTTCTTTCAATATCTCTGTGGCTGTTGATTTCTTAACAGCTTCTCAAAACCTCAGTGATGGCAACACCTTGGTCTCTGAAAAAGGATTTTTTGAGCTGGGTTTCTTCAGTCCCGGAAATTCCAAGAACCGTTACTTGGGAATTTGGTACAAAATCATCCCAATTTCCACTGTTGTATGGGTCGCCAACAGAGAAAACCCGCTCAACAATTCTTCTGGTATTTTGAGAATAAATACCACAGCCAATTATATTGTTCTCACCCAGAACAGTACCATTGTTTGGTCAACGAAGTCGTTAAAGCAAGTGGGAAATCCCAGGCTACAGCTCTTGGACAATGGAAATTTAGTCCTGAAAGACGGGAACTCAAGGGAGTTTTTGTGGCAAAGCTTCGATTATCCAACTGATACATTGTTGCCAGGAATGAAGCTAGGATGGGATTTTAAGAACGGCATAAACAGAAGATTATCAGCTTGGAAAAACTCAGACGATCCATCTCCTGGAACCTTGAACATGGAAATGGAGAATCATAGCTACCCAGAACCTGCCATGTGGAATGGTACCCAAGAGTTCATGAGAACTGGACCTTGGAATGGGATTCGGTATAGCTCCAAATCTAACTCTGGTCTCCCAATTTTGGTATACCACTATGTGAATAATAAAAATGAGCTTTACTTCAGCTACCAGCTGATTAACAACTCTCTGATTGGAAGAATGGTGTTGAACCAATCAATGTTCAGGAGAGAGGCCATATTGTGGTCAGAAGCTGAGAAAAACTGGAAGGTATACGCCACGATGCCGAGGGATTACTGCGACACATACAACGTTTGTGGTGCCTATGGGAGCTGTAACATTGAGGATATGCCTTCTTGTCAATGTCTAAAAGGGTTTCGGCCAAGGGTCCTGGAGAAATGGAATCTCATGGATTATACAGAAGGGTGTGTCAGAAATAAGCCTCTGAATTGCTCGGATAAAGTTGGCTTTGCAAAGTTCCCGGGACTGAAACTACCTGACACCAGATTGTCCTGGGTTAATGAAAGCATGAGTTTAAGTGAATGCAGGGAAAAATGCTTGAGAAATTGTTCTTGTATGGCGTTTGCCAATACAGATATCAGAGAATCAGGTAGTGGTTGTGCCATTTGGCTTGGTGATCTTATTGATATTAAAGTGGTTCTAAAAGGTGGACAAGACTTGTATGTTCGAGTACTCGCTTCTGAGTTGGACAAAAAGGAGGCGAGTTCGGTTGTCATTGGCATTATAGTTTCAGCTGCAGTCCTTATAATTGCCGGCTTGCTTTTGGTTGGATTTTACATTATTAGAAGCAGGAAAAGCCTTGAAGGTAAGGAATTAGAAGGGCAAGAGGAAGACTTGGATCTCCCATTATTTGACCTTTCAGCAATATCAAATGCCACAGACAATTTTTCAAACTGTAACAAGCTCGGAGAAGGTGGCTTTGGTGCAGTATTTCGGGGTAGACTCACAGATGGACAAGAAATTGCTGTAAAGAGGCTTTCCAGCTATTCAAAACAAGGGGCCAATGAGTTCAAGAATGAAGTAATACTTATTGCCAAACTTCAGCATCGGAATCTAGTAAAACTTTTGGGTTGCTGCATCCATGAGAAAGAAAGAATGCTGATTTATGAATACATGCCTAATAAGAGCTTGGACTCCTTCATATTTGATTCTGCTGGAAGGAATCTTTTAGATTGGTCGAAGCGATTCAATATCATATGCGGAATAGCTAGGGGGATTCTTTATCTTCATCAAGATTCTAGATTAAGGATTATACACAGAGATCTGAAACCCAGCAATGTCTTGCTTGATATTGATATGAACCCAAAAATCTCAGATTTTGGAATGGCTAGAACTTTTGGTGGAGATCAAACTGAAGGAAATACTAGGAGAGTGGTTGGAACATATGGGTATATGGCACCAGAGTATGCAATCGATGGACAATTTTCTATAAAGTCGGACGTATTTAGTTTTGGCATTCTATTGTTGGAGATTATAAGTGGACAGAAAAATAGAGGATTTTATTGCTCGGACCATACTCTAAACCTTATTGGACATGCGTGGAAGCTATGGAAAGAAGGAAGGCCACTAGAATTGATCGACCCATCCATTGGAGACTCGTATGCTCTATCTGAAGTACTGCGATGCATCCATATTAGCCTTTTATGCTTGCAACAACATCCTGAGGATAGACCCATCATGTCCAATGTGGTCCTAATGCTAAGTAGTGAGAGTGCCTTAACGCAACCGAAACAACCGGAATTTTATATGGAAAGGGATTCATTTAAAGTAGACTCTCTTTTGAGCAGGAATGAATCTTCTACTACTAATGAATTAACTACTACCGTCTTGGAGGCTAGA 4830 44.49 PLISLIPTTLFLLSSLAMAVDFLIPPQNLTNGATLVSEKSIFELGFFRPGNSTGFYLGIWYKIIPTHTIVWVANRESPINDSSAVLKINSTASSLALTQNGVVVWSSKPLRAVENPKLQLLDNGNLVLKDADSGEISWQSFDYPTDTLLPGMKLGWDFRTGIHRWLSSWRNSNDPSPGNFTLEMMKTAYPEPVMWNGSKEFMRSGPWNGLQFSAKPTSALPILVYHYENSKNELSYSYNLINSSLIGRMVMNETKSRREVLLWSESEKNWKLYATMPRDYCDTYGLCGAFGSCDIEETPACQCLKGFRPRVQEKWNLMDYTEGCVRNRPLNCSDETGFAIFPGLKLPDTKLSWVNESMSLTECREKCMRNCSCVAFANTDIRGSGSGCAIWIGELIDIKVVHRGGQDLYVRMLASELETKKTSSVVVGVIIGAAVLAIAGLVLVGFYLIRSRRRSLEGTGKDLEGQDEDLELPLFDLTTISSATDNFSNSNKLGEGGFGAVFRGRLVDGQEIAVKRLSSYSRQGTEEFKNEVILIAKLQHRNLVKLLGCCIQGEEKMLIYEYMPNKSLDSFIFDSGRKKLLDWKKRFNIICGVARGILYLHQDSRLRIIHRDLKASNVLLDIDMNPKISDFGMARTFGGDQTEGNTRRVVGTYGYMAPEYAIDGQFSIKSDVFSFGILLLEIISGEKNRGFFRPNSTLNLIGHAWNLWNEGKPLELIDASIGESYALSEVLRCIHVSLLCLQQHPEARPTMSNVVLMLSSESTLAQPKQPGFYMERDSLEPDSHSGSKQTTSQVVGKPNGTQCRMANFPLMSIVTTVFLYSSFNISVAVDFLTASQNLSDGNTLVSEKGFFELGFFSPGNSKNRYLGIWYKIIPISTVVWVANRENPLNNSSGILRINTTANYIVLTQNSTIVWSTKSLKQVGNPRLQLLDNGNLVLKDGNSREFLWQSFDYPTDTLLPGMKLGWDFKNGINRRLSAWKNSDDPSPGTLNMEMENHSYPEPAMWNGTQEFMRTGPWNGIRYSSKSNSGLPILVYHYVNNKNELYFSYQLINNSLIGRMVLNQSMFRREAILWSEAEKNWKVYATMPRDYCDTYNVCGAYGSCNIEDMPSCQCLKGFRPRVLEKWNLMDYTEGCVRNKPLNCSDKVGFAKFPGLKLPDTRLSWVNESMSLSECREKCLRNCSCMAFANTDIRESGSGCAIWLGDLIDIKVVLKGGQDLYVRVLASELDKKEASSVVIGIIVSAAVLIIAGLLLVGFYIIRSRKSLEGKELEGQEEDLDLPLFDLSAISNATDNFSNCNKLGEGGFGAVFRGRLTDGQEIAVKRLSSYSKQGANEFKNEVILIAKLQHRNLVKLLGCCIHEKERMLIYEYMPNKSLDSFIFDSAGRNLLDWSKRFNIICGIARGILYLHQDSRLRIIHRDLKPSNVLLDIDMNPKISDFGMARTFGGDQTEGNTRRVVGTYGYMAPEYAIDGQFSIKSDVFSFGILLLEIISGQKNRGFYCSDHTLNLIGHAWKLWKEGRPLELIDPSIGDSYALSEVLRCIHISLLCLQQHPEDRPIMSNVVLMLSSESALTQPKQPEFYMERDSFKVDSLLSRNESSTTNELTTTVLEAR 1610
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7892222 7904420 + MC11g0930 Mch11g1127 680061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1127 1610 ProSiteProfiles PAN/Apple domain profile. 332 413 IPR003609 -
Mch11g1127 1610 ProSiteProfiles Protein kinase domain profile. 1293 1570 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g1127 1610 FunFam Os04g0303100 protein 59 201 - -
Mch11g1127 1610 Gene3D Hepatocyte Growth Factor 1138 1221 - -
Mch11g1127 1610 Gene3D Hepatocyte Growth Factor 330 412 - -
Mch11g1127 1610 SUPERFAMILY alpha-D-mannose-specific plant lectins 878 984 IPR036426 -
Mch11g1127 1610 Gene3D Transferase(Phosphotransferase) domain 1 563 771 - -
Mch11g1127 1610 Gene3D Transferase(Phosphotransferase) domain 1 1369 1584 - -
Mch11g1127 1610 FunFam Os04g0303100 protein 868 1010 - -
Mch11g1127 1610 MobiDBLite consensus disorder prediction 784 798 - -
Mch11g1127 1610 ProSiteProfiles Bulb-type lectin domain profile. 20 141 IPR001480 -
Mch11g1127 1610 CDD PAN_AP_plant 329 411 - -
Mch11g1127 1610 SMART ntp_6 333 412 IPR003609 -
Mch11g1127 1610 SMART ntp_6 1142 1221 IPR003609 -
Mch11g1127 1610 ProSitePatterns Protein kinases ATP-binding region signature. 1299 1321 IPR017441 GO:0005524(InterPro)
Mch11g1127 1610 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 825 950 - -
Mch11g1127 1610 SMART blect_4 26 144 IPR001480 -
Mch11g1127 1610 SMART blect_4 835 953 IPR001480 -
Mch11g1127 1610 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1258 1368 - -
Mch11g1127 1610 ProSiteProfiles Bulb-type lectin domain profile. 829 950 IPR001480 -
Mch11g1127 1610 Pfam Domain of unknown function (DUF3403) 1565 1610 IPR021820 GO:0004674(InterPro)
Mch11g1127 1610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g1127 1610 ProSiteProfiles PAN/Apple domain profile. 1141 1222 IPR003609 -
Mch11g1127 1610 Pfam S-locus glycoprotein domain 203 310 IPR000858 GO:0048544(InterPro)
Mch11g1127 1610 Pfam S-locus glycoprotein domain 1012 1119 IPR000858 GO:0048544(InterPro)
Mch11g1127 1610 ProSitePatterns Lipocalin signature. 859 872 IPR022272 -
Mch11g1127 1610 CDD B_lectin 838 953 IPR001480 -
Mch11g1127 1610 CDD EGF_CA 1088 1119 - -
Mch11g1127 1610 Pfam Protein tyrosine and serine/threonine kinase 490 755 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g1127 1610 Pfam Protein tyrosine and serine/threonine kinase 1297 1511 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g1127 1610 SUPERFAMILY Protein kinase-like (PK-like) 1278 1564 IPR011009 -
Mch11g1127 1610 ProSitePatterns Protein kinases ATP-binding region signature. 493 515 IPR017441 GO:0005524(InterPro)
Mch11g1127 1610 MobiDBLite consensus disorder prediction 775 798 - -
Mch11g1127 1610 CDD PAN_AP_plant 1138 1221 - -
Mch11g1127 1610 Gene3D Phosphorylase Kinase; domain 1 1257 1368 - -
Mch11g1127 1610 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 452 562 - -
Mch11g1127 1610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1414 1426 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g1127 1610 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 563 766 - -
Mch11g1127 1610 SMART serkin_6 1293 1562 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g1127 1610 SMART serkin_6 487 758 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g1127 1610 CDD TM_EGFR-like 419 454 - -
Mch11g1127 1610 SUPERFAMILY Protein kinase-like (PK-like) 472 758 IPR011009 -
Mch11g1127 1610 Pfam PAN-like domain 332 398 IPR003609 -
Mch11g1127 1610 Pfam PAN-like domain 1141 1207 IPR003609 -
Mch11g1127 1610 Pfam D-mannose binding lectin 68 170 IPR001480 -
Mch11g1127 1610 Pfam D-mannose binding lectin 877 979 IPR001480 -
Mch11g1127 1610 Gene3D - 824 950 IPR036426 -
Mch11g1127 1610 Gene3D - 16 141 IPR036426 -
Mch11g1127 1610 Gene3D Phosphorylase Kinase; domain 1 462 562 - -
Mch11g1127 1610 CDD STKc_IRAK 1299 1564 - -
Mch11g1127 1610 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 829 1578 - -
Mch11g1127 1610 CDD B_lectin 29 144 IPR001480 -
Mch11g1127 1610 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 16 141 - -
Mch11g1127 1610 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 175 IPR036426 -
Mch11g1127 1610 ProSiteProfiles Protein kinase domain profile. 487 764 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g1127 1610 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1369 1572 - -
Mch11g1127 1610 CDD STKc_IRAK 493 758 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1127 Mch-Chr11:7892222 Mch3g1187 Mch-Chr3:15081308 0 dispersed
Mch10g0621 Mch-Chr10:4223925 Mch11g1127 Mch-Chr11:7892222 1.93E-109 transposed
Mch4g1932 Mch-Chr4:21877475 Mch11g1127 Mch-Chr11:7892222 4.12E-120 transposed
Mch5g1653 Mch-Chr5:17363824 Mch11g1127 Mch-Chr11:7892222 5.67E-08 transposed
Mch9g1305 Mch-Chr9:15283138 Mch11g1127 Mch-Chr11:7892222 4.21E-95 transposed
Mch1g1806 Mch-Chr1:18260398 Mch11g1127 Mch-Chr11:7892222 2.77E-177 wgd
Mch10g1139 Mch-Chr10:8548939 Mch11g1127 Mch-Chr11:7892222 0 wgd
Mch11g1127 Mch-Chr11:7892222 Mch2g0602 Mch-Chr2:4134040 2.73E-116 wgd
Mch11g1127 Mch-Chr11:7892222 Mch3g1179 Mch-Chr3:15018230 7.34E-217 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77076 PF07714 PK_Tyr_Ser-Thr 3.00E-46 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1127 - - - 0.0