Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1144 ATGGACTCTCACCAAATTTTTGGATTTGGGGTAAACAGTGCAGGTGTTTCATACACATCTTCTTATTCCTCTGTTCCATCTTTGCCTAATACTTATCTTGGACCCTTGAACTTCAACTTAAGAAACTCCCCGACGTCGCTTTTCTCATCGTCCCATTTAGATTCGGACTCCTTTACGACGCCGAGTGATAGTCAGGATCAGAGATACTCGCCTGAGAATCTGTCTGGGCTTAGCCCTTCTTGTAATTCGTCGTTTGAAACAAATAGCTTTCATCATACAGCCTCGCCGTATTTGGATCATTGCGAGGAGAGTCGAGGAATTTATTCGGGGACGAGCGCGTTTGATTATGAGGGATGCTCGACTGAGAACATAAGGTACGCTTTGAAACAATTGGAGACTGCTCTGATGGGGCCGGATAATGAGGAGGTTGCTAGCAAGCCGGATGCTTCATTTGGAGAGAGTAGTAGGCCCCAGATGATGGGGCAGAGGTCCTACTCTTGGAGCCAAGATCGACGTGGGTCGAATATTGGCCAGTCTCAGACTTCGTCTGTCTCGAGAAGCCAGCAGCCTGAAGCGGTTCATTTGGGGAAACGTCAGAAGTCGTTGGATGAATCGTTGTTGCAGGGAGGATTTCCATCAGATAATTTGAAGGAGTTGCTGATTGCTTGTGCAAAAGCTTTAGCTGAAAACAGGATGGAGGATTTTGACAACTTGGTTGCCACAGCAAGAGGTGCTGTGTCCATCAGCGGAGAACCGATCCAGCGTCTTGGTGCTTACATGGTCGAAGGGCTGGTGGCGAGGAAAGAGGCATCAGGAGCGTGTATATACCGTGCCCTCAACTGTAGAGAGCCTGCAAGTAACGATTTGCTATCTTACATGCATATGCTATACGAAATCTGCCCCTACTTGAAGTTCGGTTACATGGCAGCGAACGGGGCAATTGCTGAAGCCTGCAGAAATGAAGACCGCATCCACATCATAGATTTCCAGATTACTCAGGGGACGCAGTGGTTAACTCTTCTTCAGGCACTCGCAGCAAGGCCCAGTGGGGCTCCCCATGTGAGGATAACCGGTATCGATGACCCTGTTTCAAAATACGCCCGCGGTGACGGGTTGGAAGTAGTGGAGAGGCGGTTGGCTGAAATCTCCAGGAAGTACGACATACCCGTCGAGTTTCATGGAGTACCTGTTTTCGCTCCAGACATCAGGTGCGATATGCTCGACATCAGGCCTGGGGAGGCGCTGGCTGTGAACTTCCCATTGCAACTTCATCATACCCCGGACGAAAGCGTCAACGTGAACAATCCTCGAGACGGTCTGCTGAGAATGGTGAAGTCATTATCCCCAAAGGTAGTAACTTTGGTAGAACAAGAATCAAACACCAACACAACCCCTTTCTTCAACAGGTTTGTGGAAACTTTGAATTACTATTTGGCAATCTTTGAGTCCATTGATGTCACTCTACCAAGGAACAACAAGAAGCGCATCAATGTGGAGCAGCATTGTTTGGCAAAAGACATCGTTAATGTCATCGCTTGCGAGGGGATCGAACGGGAAGAGCGGCACGAGCTCTTCGGGAAGTGGAAATCGAGGTTGACAATGGCAGGGTTCCGCCAGTTCCCGTTGAGCTCTTATGTCAACAATGTCATCAGGGGCCTGCTCGGGTATTATTCCGAGCACTACACTCTCGTTGAGAGAGATGGAGCGATGCTGTTGGGATGGAAAAACAGGAACCTGATATCTGCCTCGGCTTGG 1755 49.12 MDSHQIFGFGVNSAGVSYTSSYSSVPSLPNTYLGPLNFNLRNSPTSLFSSSHLDSDSFTTPSDSQDQRYSPENLSGLSPSCNSSFETNSFHHTASPYLDHCEESRGIYSGTSAFDYEGCSTENIRYALKQLETALMGPDNEEVASKPDASFGESSRPQMMGQRSYSWSQDRRGSNIGQSQTSSVSRSQQPEAVHLGKRQKSLDESLLQGGFPSDNLKELLIACAKALAENRMEDFDNLVATARGAVSISGEPIQRLGAYMVEGLVARKEASGACIYRALNCREPASNDLLSYMHMLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQITQGTQWLTLLQALAARPSGAPHVRITGIDDPVSKYARGDGLEVVERRLAEISRKYDIPVEFHGVPVFAPDIRCDMLDIRPGEALAVNFPLQLHHTPDESVNVNNPRDGLLRMVKSLSPKVVTLVEQESNTNTTPFFNRFVETLNYYLAIFESIDVTLPRNNKKRINVEQHCLAKDIVNVIACEGIEREERHELFGKWKSRLTMAGFRQFPLSSYVNNVIRGLLGYYSEHYTLVERDGAMLLGWKNRNLISASAW 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8022143 8023897 - MC11g0943 Mch11g1144 680078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1144 585 MobiDBLite consensus disorder prediction 51 77 - -
Mch11g1144 585 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 180 585 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Mch11g1144 585 MobiDBLite consensus disorder prediction 151 194 - -
Mch11g1144 585 ProSiteProfiles GRAS family profile. 207 585 IPR005202 -
Mch11g1144 585 Pfam GRAS domain family 216 585 IPR005202 -
Mch11g1144 585 MobiDBLite consensus disorder prediction 138 199 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1144 Mch-Chr11:8022143 Mch2g0480 Mch-Chr2:3477411 5.98E-170 dispersed
Mch11g1144 Mch-Chr11:8022143 Mch3g0228 Mch-Chr3:3043057 1.55E-64 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42620 PF03514 GRAS 1.20E-126 CL0063 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1144 K27748 - csv:101216606 944.495