Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1146 ATGCCAACAGTTTGGTTTTCTTTGAAAAAGTCGTTCCCTTGCAAACCAGAGCCATCAGAAGTCTATGATCCGAAGTGCAGGAAACAACTCAACTCAATCACAACTAAGAAACCAGCCAAGAAGTCAGGCTGTTCTTCTGGGAGGTCTGGCTGTTCAAGGTCCATAGCAAATCTCAAAGATGTCATCCATGGAAGCAAGAGGCACATGGAGAAGCCGCCAATTTGCAGCCCGAGGTCGATCGGTAGCAGCGAGTTCCTCAACCCGATTGCCCACGAAGTCATATTGAGCAACTCAAAGTGTGAGCTCAAGATCACTGGCTTTGGAGGTTTCCATCAAGAGGGTGTGGGAAATGGTGGCTTTGGTGGAGGTGGCGGCGGGAATTCGCCAATTTTCGGTACTCTAAGGCCGGGAACTCCCGGTCCAGGGGAGAACTTCACTAACAACTCCAATTCTCCTCTTAGTACTACTTCCATAATAGCTGCAAGAAAGCTACCTTCTCTTTCATCATATAGAGATGAGTCTGCAGCTGGGAGTACTGCTAAATCTAAGGGGGGTGTGGAAGTTCATACAAGCAGAAGGTTCGCCCCGCTAACCGAATCTAACGGTAATACGTTATCGGCGGTTACTTGCCATAAATGTGGAGAACAGTTCTGCAAATTGGATGCTGCTGAGTCTCACCATCTCTCCAAGCATGCTGTTACTGAGCTCATGGAAGGAGATTCATCAAGGAAAATCGTTGAAATAATATGTCGAACGAACTGGTTGAAGTCCGAGAACAATGGAAATCGGATTGAAAGAGTCTTCAAAGTTCACACCATGCAGAAAACACTAGCTGGATTCGAAGAATACAGGGAAATGGTGAAGATCAAGGCCAGCAAGCTTTCGAAGAAACACCCTCGGTGCCTCGCCGATGGGAACGAGCTACTGAGGTTTTTTGGGGCGACTTTGGCCTGCTCTCTTGGACAAAATGGCTCCCCCAGCCTCTGCATATCACAGAAATGCAGTGTTTGCAGAATCATAAGGAGTGGTTTCTCAGCAAAGAAGGACATGAAAGAAGAAATAGGAGTTTTCACGACTTCGACGAGTGGAAAAGCCTTAGAAACCATCGTAACGACAGAGGAGAGCTCGACAAAGAAGGCATTGATAATCTGCAGAGTGATTGCAGGGAGGGTTCATAGGCCATTAGAGAACATACAAGAAATGATTGGCCAGACAGGGTTTGATTCTTTGGCTGGCAAAGTGGGATTACATTCCAACATTGAAGAGCTTTATTTGCTGAATCCTAGAGCATTGCTTCCTTGCTTTGTTGTAATCTGCAAACCA 1323 46.49 MPTVWFSLKKSFPCKPEPSEVYDPKCRKQLNSITTKKPAKKSGCSSGRSGCSRSIANLKDVIHGSKRHMEKPPICSPRSIGSSEFLNPIAHEVILSNSKCELKITGFGGFHQEGVGNGGFGGGGGGNSPIFGTLRPGTPGPGENFTNNSNSPLSTTSIIAARKLPSLSSYRDESAAGSTAKSKGGVEVHTSRRFAPLTESNGNTLSAVTCHKCGEQFCKLDAAESHHLSKHAVTELMEGDSSRKIVEIICRTNWLKSENNGNRIERVFKVHTMQKTLAGFEEYREMVKIKASKLSKKHPRCLADGNELLRFFGATLACSLGQNGSPSLCISQKCSVCRIIRSGFSAKKDMKEEIGVFTTSTSGKALETIVTTEESSTKKALIICRVIAGRVHRPLENIQEMIGQTGFDSLAGKVGLHSNIEELYLLNPRALLPCFVVICKP 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8049517 8051116 - MC11g0945 Mch11g1146 680080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1146 441 MobiDBLite consensus disorder prediction 118 153 - -
Mch11g1146 441 Gene3D - 232 440 - -
Mch11g1146 441 FunFam C2H2-like zinc finger protein 232 440 - -
Mch11g1146 441 SUPERFAMILY ADP-ribosylation 233 440 - -
Mch11g1146 441 ProSitePatterns Zinc finger C2H2 type domain signature. 210 231 IPR013087 -
Mch11g1146 441 MobiDBLite consensus disorder prediction 175 198 - -
Mch11g1146 441 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 440 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1146 Mch-Chr11:8049517 Mch4g1743 Mch-Chr4:20524939 3.14E-70 dispersed
Mch1g1800 Mch-Chr1:18223991 Mch11g1146 Mch-Chr11:8049517 1.40E-67 wgd
Mch10g1143 Mch-Chr10:8567434 Mch11g1146 Mch-Chr11:8049517 8.28E-194 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1146 - - - 0.0