Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g1148 | ATGACATTTCGACAACTTATGGGTGTGGCAAAAAGGGGATGTTTGGTTGTTCTGGTGATTTTCATCTGTGCTTCCTTTGCAACTTGCTCGAAGGACCACGAGGAAGTGGAAATGTTTCTGATTCAACTAGCTGACCCAATTACTGGGGATGTCAACACAGAGATGGCCGAGCTGTTATGGGTTAAATGCAACCTGGATTTGATTCCGTTGAAGGAAGCTGTAGATGGTATTGACTTATGTTCTGAAGAAAGACCCGGTAACACAAATGGAATTAACCTTGAATGTCAGATGCTGACAAAAGAAAAAACGAATAGAATGTTAAATGCCATGCACCCCCAGGTGAAACAGTCTCTTTTAGATTGTTTAAGAAAGAATTTTCACGTCTCTGGGGAAGACTACAGTTCTGAAGCTTGGTACACCAGATATTTGGAGTCTTTGCTTTTAATGCCTGGTAATCTTAGAAGGAAGTTAAGTTCTAGATGGTTTCGAAGCGCTAAAGAAGAACCTGCTCCAGCACCTGAATCTTCAGAAATTCATCAAACTAAAAAACCATCAGATTCTATAGATTCAAGTTTACAACCTTCAGAAGATGAAAAGCCTTCAAGAAAAGCTTCTAGCACAAGTGGGAAAAAAAAAAAGAAATCTAATAACAATCAAACAGTTGTCATTGCTGTTGCTGTAACGGCAACAGTGACTTTTATTATTGTAGCTCTGCTCTTTCTATGCTTTCATAAGAGTGGCTCCAGAGGGAGGCAAAATGATGAACATCATGAAAGGCCTCTCCTAAGCTTGAGCTTAAGTTCTTCGCCCAAGTATTCTTCCTTTGGGAATTCTCTTAAGGAAGACAAGCTCATGAATCAATCATCTAACTTGAGTCACCACTCGAGAGCTCCATCTTTGGATGGTAGCTTGCACATTGTCTCTGATGATGCACGTACTTCGGTACATGGACCTCCATCTTTTGGAGCTGCTGGAATTGCCAATAAATCATCTTTTGGATCATCATATATGGCTGATGGTACTAATGGCTTGTTACCACCTCCTCCTGGAGCAGTGCCGGTCACCTCAAATATTATGCCTCCTCTGAAGCCTCCTCCCGGCAGGGCTGTTCCCCTCCCTCCTGAACCACCTTCATCTTTTAAGGCTCCATCCAGCATGGCTGGTCCTCCTCCACCGCCACCTCCTGCACCACCACCATCTTCAAGGCCTCCTGGAAATGCAGTTTGTCCTCCTGGAGTTCCTCCACCTCCACCACCTGCACCAGGCAACAAAGCAGGCCCTCGGCCACCACCACCACCTCTCAGAAGTGGTGCTGCTGCCCCTCGGCCCCCTCCATTAGCACCGAAAGGTGCAAATCCACCTCGAGCTCCAAAATTTGGAGAGGATGGAAGTATGGATGACGGTGCTAACAAAGCCAAATTGAAGCCATTTTTCTGGGACAAAGTTCTTGCAAACCCCGATAATACCATGGTCTGGCATCAGTTAAAAGCAGGGTCTTTCCAATTCAACGAGGAGATGATAGAAACTCTTTTTGGATATACACCTGTTGTTGATAAAAACAAAAGTGAGGGCAAGAAAGAGTCATCATCACAAGATCCTGCACACCAGTATATTCAAATCATTGATTCAAAGAAAGCACAAAATCTATCCATTCTTTTGCGTGCGTTAAATGTGACAAGAGAAGAAGTTTGTGATGCACTTCATGAAGGAACTGAACTTCCTTCTGAACTTCTTGAGAACTTACTGAGGATGGCACCAACACCAGAAGAAGAACTGAAGCTTAGACTGTTTAGTGGGGAACCTTCTCAACTCGGAACCGCTGAGCGATTTCTTAAATGTTTGGTTGATATCCCATTTGCTTTCAAAAGGTTGGAAACGCTGCTTTTCATGGGTACTCTTCAGGAGGACATCACCATCACTAAAGAGTCCTTTGTCAACTTGGAGGTTGCTTGTCGGGAACTTCGGAGCAGCAGGCTGTTCCTCAAACTTCTAGAAGCTGTTCTTAAGACTGGCAATCGGATGAATGTTGGAACTTTTCGAGGTGGTGCACAAGCATTCAAACTGGACACTCTTTTAAAACTGTCAGATGTGAAAGGAAAAGACGGCAAGACTACGCTCTTGCACTTTGTAGTCCTGGAGATAATTCGCACGGAGGGTATGAGAGCTGCCCGGAACGGTACAGGAAGCCACAGCTTCTCAAGCTCCTCATCAAAGGAACTGCTGGACAGAGTTCTTAGTGACACAGAAGAGCATTACCGTGTTTTGGGTCTTCAAGTCGTCTCGTGCTTGAGCGGTGAACTTCAGAATGTGAAGAAAGCAGCAACCATAGACGCTGATGCCTTGACAGGAACTGTTTCCAAACTTGGGCATGCACTGTTGAGGACCAGAGACTTCCTGAACAAAGACATGCAGGGTCTAGGTGAAGAAAGCAAGTTTCACGAAACACTGAAAGGCTTTGTGCAGTCTGCTGAGGTTGGTATCATGGCCCTCCTGGAAGAAGAAAAAAGAATCATGGAACTGGTGAAAAGCACGGGCGATTACTTCCATGGAAATGCGGGGAAGGACGAGGGCCTACGGTTGTTCGTTATAGTACGGGATTTCTTGATAATGTTAGATAAGACGTGCCGAGAGGTAAAGGATGCACAGAAAAAGCAGGCAAAAGGACATAGAAAGGTAGCGTCGTCTTCCGATATCCAGCACCCCATCCAGCACCCCATTTCAACTCCAGTTTCTCCCGATACCAACCACCCCCCTTCAACTCCAGTTTCTTCTGATATCAATCAGCCCCCTCCAACTCCAGTTTCTTCTGATGTCAAGCACCCCCCTCCCCCTCCAACTCCAGTTTCTTCTAATATCAAGTACCCCCCTCCCCCTCCACCTCCAGTTGTCTCTAATACACATCCCCCGCCTTCTTCCGATTTCAATCAGCTGATTTTCCCAGCAATCACTGATCGTCGGATGGGCAGCTCAAGTTCAGATGATGAG | 2985 | 45.56 | MTFRQLMGVAKRGCLVVLVIFICASFATCSKDHEEVEMFLIQLADPITGDVNTEMAELLWVKCNLDLIPLKEAVDGIDLCSEERPGNTNGINLECQMLTKEKTNRMLNAMHPQVKQSLLDCLRKNFHVSGEDYSSEAWYTRYLESLLLMPGNLRRKLSSRWFRSAKEEPAPAPESSEIHQTKKPSDSIDSSLQPSEDEKPSRKASSTSGKKKKKSNNNQTVVIAVAVTATVTFIIVALLFLCFHKSGSRGRQNDEHHERPLLSLSLSSSPKYSSFGNSLKEDKLMNQSSNLSHHSRAPSLDGSLHIVSDDARTSVHGPPSFGAAGIANKSSFGSSYMADGTNGLLPPPPGAVPVTSNIMPPLKPPPGRAVPLPPEPPSSFKAPSSMAGPPPPPPPAPPPSSRPPGNAVCPPGVPPPPPPAPGNKAGPRPPPPPLRSGAAAPRPPPLAPKGANPPRAPKFGEDGSMDDGANKAKLKPFFWDKVLANPDNTMVWHQLKAGSFQFNEEMIETLFGYTPVVDKNKSEGKKESSSQDPAHQYIQIIDSKKAQNLSILLRALNVTREEVCDALHEGTELPSELLENLLRMAPTPEEELKLRLFSGEPSQLGTAERFLKCLVDIPFAFKRLETLLFMGTLQEDITITKESFVNLEVACRELRSSRLFLKLLEAVLKTGNRMNVGTFRGGAQAFKLDTLLKLSDVKGKDGKTTLLHFVVLEIIRTEGMRAARNGTGSHSFSSSSSKELLDRVLSDTEEHYRVLGLQVVSCLSGELQNVKKAATIDADALTGTVSKLGHALLRTRDFLNKDMQGLGEESKFHETLKGFVQSAEVGIMALLEEEKRIMELVKSTGDYFHGNAGKDEGLRLFVIVRDFLIMLDKTCREVKDAQKKQAKGHRKVASSSDIQHPIQHPISTPVSPDTNHPPSTPVSSDINQPPPTPVSSDVKHPPPPPTPVSSNIKYPPPPPPPVVSNTHPPPSSDFNQLIFPAITDRRMGSSSSDDE | 995 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8056654 | 8062810 | - | MC11g0947 | Mch11g1148 | 680082 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g1148 | 995 | MobiDBLite | consensus disorder prediction | 249 | 278 | - | - | |
Mch11g1148 | 995 | MobiDBLite | consensus disorder prediction | 896 | 910 | - | - | |
Mch11g1148 | 995 | Gene3D | Formin, FH2 domain | 470 | 900 | IPR042201 | - | |
Mch11g1148 | 995 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 414 | 889 | - | - | |
Mch11g1148 | 995 | MobiDBLite | consensus disorder prediction | 882 | 995 | - | - | |
Mch11g1148 | 995 | Pfam | Formin Homology 2 Domain | 470 | 871 | IPR015425 | - | |
Mch11g1148 | 995 | SMART | it6_source | 464 | 885 | IPR015425 | - | |
Mch11g1148 | 995 | MobiDBLite | consensus disorder prediction | 346 | 452 | - | - | |
Mch11g1148 | 995 | MobiDBLite | consensus disorder prediction | 923 | 967 | - | - | |
Mch11g1148 | 995 | MobiDBLite | consensus disorder prediction | 262 | 278 | - | - | |
Mch11g1148 | 995 | PANTHER | FORMIN-RELATED | 148 | 888 | IPR027643 | GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro) | |
Mch11g1148 | 995 | MobiDBLite | consensus disorder prediction | 340 | 468 | - | - | |
Mch11g1148 | 995 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 464 | 897 | IPR015425 | - | |
Mch11g1148 | 995 | MobiDBLite | consensus disorder prediction | 166 | 216 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g1148 | Mch-Chr11:8056654 | Mch2g1335 | Mch-Chr2:9454495 | 4.01E-112 | dispersed | |
Mch6g2051 | Mch-Chr6:22799524 | Mch11g1148 | Mch-Chr11:8056654 | 2.20E-107 | transposed | |
Mch6g2239 | Mch-Chr6:24610220 | Mch11g1148 | Mch-Chr11:8056654 | 1.03E-105 | transposed | |
Mch8g2030 | Mch-Chr8:22748501 | Mch11g1148 | Mch-Chr11:8056654 | 4.59E-84 | transposed | |
Mch9g2201 | Mch-Chr9:22560713 | Mch11g1148 | Mch-Chr11:8056654 | 5.75E-84 | transposed | |
Mch11g1148 | Mch-Chr11:8056654 | Mch2g0617 | Mch-Chr2:4239331 | 5.71E-168 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g1148 | K28090 | - | csv:101213072 | 1300.8 |