Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1148 ATGACATTTCGACAACTTATGGGTGTGGCAAAAAGGGGATGTTTGGTTGTTCTGGTGATTTTCATCTGTGCTTCCTTTGCAACTTGCTCGAAGGACCACGAGGAAGTGGAAATGTTTCTGATTCAACTAGCTGACCCAATTACTGGGGATGTCAACACAGAGATGGCCGAGCTGTTATGGGTTAAATGCAACCTGGATTTGATTCCGTTGAAGGAAGCTGTAGATGGTATTGACTTATGTTCTGAAGAAAGACCCGGTAACACAAATGGAATTAACCTTGAATGTCAGATGCTGACAAAAGAAAAAACGAATAGAATGTTAAATGCCATGCACCCCCAGGTGAAACAGTCTCTTTTAGATTGTTTAAGAAAGAATTTTCACGTCTCTGGGGAAGACTACAGTTCTGAAGCTTGGTACACCAGATATTTGGAGTCTTTGCTTTTAATGCCTGGTAATCTTAGAAGGAAGTTAAGTTCTAGATGGTTTCGAAGCGCTAAAGAAGAACCTGCTCCAGCACCTGAATCTTCAGAAATTCATCAAACTAAAAAACCATCAGATTCTATAGATTCAAGTTTACAACCTTCAGAAGATGAAAAGCCTTCAAGAAAAGCTTCTAGCACAAGTGGGAAAAAAAAAAAGAAATCTAATAACAATCAAACAGTTGTCATTGCTGTTGCTGTAACGGCAACAGTGACTTTTATTATTGTAGCTCTGCTCTTTCTATGCTTTCATAAGAGTGGCTCCAGAGGGAGGCAAAATGATGAACATCATGAAAGGCCTCTCCTAAGCTTGAGCTTAAGTTCTTCGCCCAAGTATTCTTCCTTTGGGAATTCTCTTAAGGAAGACAAGCTCATGAATCAATCATCTAACTTGAGTCACCACTCGAGAGCTCCATCTTTGGATGGTAGCTTGCACATTGTCTCTGATGATGCACGTACTTCGGTACATGGACCTCCATCTTTTGGAGCTGCTGGAATTGCCAATAAATCATCTTTTGGATCATCATATATGGCTGATGGTACTAATGGCTTGTTACCACCTCCTCCTGGAGCAGTGCCGGTCACCTCAAATATTATGCCTCCTCTGAAGCCTCCTCCCGGCAGGGCTGTTCCCCTCCCTCCTGAACCACCTTCATCTTTTAAGGCTCCATCCAGCATGGCTGGTCCTCCTCCACCGCCACCTCCTGCACCACCACCATCTTCAAGGCCTCCTGGAAATGCAGTTTGTCCTCCTGGAGTTCCTCCACCTCCACCACCTGCACCAGGCAACAAAGCAGGCCCTCGGCCACCACCACCACCTCTCAGAAGTGGTGCTGCTGCCCCTCGGCCCCCTCCATTAGCACCGAAAGGTGCAAATCCACCTCGAGCTCCAAAATTTGGAGAGGATGGAAGTATGGATGACGGTGCTAACAAAGCCAAATTGAAGCCATTTTTCTGGGACAAAGTTCTTGCAAACCCCGATAATACCATGGTCTGGCATCAGTTAAAAGCAGGGTCTTTCCAATTCAACGAGGAGATGATAGAAACTCTTTTTGGATATACACCTGTTGTTGATAAAAACAAAAGTGAGGGCAAGAAAGAGTCATCATCACAAGATCCTGCACACCAGTATATTCAAATCATTGATTCAAAGAAAGCACAAAATCTATCCATTCTTTTGCGTGCGTTAAATGTGACAAGAGAAGAAGTTTGTGATGCACTTCATGAAGGAACTGAACTTCCTTCTGAACTTCTTGAGAACTTACTGAGGATGGCACCAACACCAGAAGAAGAACTGAAGCTTAGACTGTTTAGTGGGGAACCTTCTCAACTCGGAACCGCTGAGCGATTTCTTAAATGTTTGGTTGATATCCCATTTGCTTTCAAAAGGTTGGAAACGCTGCTTTTCATGGGTACTCTTCAGGAGGACATCACCATCACTAAAGAGTCCTTTGTCAACTTGGAGGTTGCTTGTCGGGAACTTCGGAGCAGCAGGCTGTTCCTCAAACTTCTAGAAGCTGTTCTTAAGACTGGCAATCGGATGAATGTTGGAACTTTTCGAGGTGGTGCACAAGCATTCAAACTGGACACTCTTTTAAAACTGTCAGATGTGAAAGGAAAAGACGGCAAGACTACGCTCTTGCACTTTGTAGTCCTGGAGATAATTCGCACGGAGGGTATGAGAGCTGCCCGGAACGGTACAGGAAGCCACAGCTTCTCAAGCTCCTCATCAAAGGAACTGCTGGACAGAGTTCTTAGTGACACAGAAGAGCATTACCGTGTTTTGGGTCTTCAAGTCGTCTCGTGCTTGAGCGGTGAACTTCAGAATGTGAAGAAAGCAGCAACCATAGACGCTGATGCCTTGACAGGAACTGTTTCCAAACTTGGGCATGCACTGTTGAGGACCAGAGACTTCCTGAACAAAGACATGCAGGGTCTAGGTGAAGAAAGCAAGTTTCACGAAACACTGAAAGGCTTTGTGCAGTCTGCTGAGGTTGGTATCATGGCCCTCCTGGAAGAAGAAAAAAGAATCATGGAACTGGTGAAAAGCACGGGCGATTACTTCCATGGAAATGCGGGGAAGGACGAGGGCCTACGGTTGTTCGTTATAGTACGGGATTTCTTGATAATGTTAGATAAGACGTGCCGAGAGGTAAAGGATGCACAGAAAAAGCAGGCAAAAGGACATAGAAAGGTAGCGTCGTCTTCCGATATCCAGCACCCCATCCAGCACCCCATTTCAACTCCAGTTTCTCCCGATACCAACCACCCCCCTTCAACTCCAGTTTCTTCTGATATCAATCAGCCCCCTCCAACTCCAGTTTCTTCTGATGTCAAGCACCCCCCTCCCCCTCCAACTCCAGTTTCTTCTAATATCAAGTACCCCCCTCCCCCTCCACCTCCAGTTGTCTCTAATACACATCCCCCGCCTTCTTCCGATTTCAATCAGCTGATTTTCCCAGCAATCACTGATCGTCGGATGGGCAGCTCAAGTTCAGATGATGAG 2985 45.56 MTFRQLMGVAKRGCLVVLVIFICASFATCSKDHEEVEMFLIQLADPITGDVNTEMAELLWVKCNLDLIPLKEAVDGIDLCSEERPGNTNGINLECQMLTKEKTNRMLNAMHPQVKQSLLDCLRKNFHVSGEDYSSEAWYTRYLESLLLMPGNLRRKLSSRWFRSAKEEPAPAPESSEIHQTKKPSDSIDSSLQPSEDEKPSRKASSTSGKKKKKSNNNQTVVIAVAVTATVTFIIVALLFLCFHKSGSRGRQNDEHHERPLLSLSLSSSPKYSSFGNSLKEDKLMNQSSNLSHHSRAPSLDGSLHIVSDDARTSVHGPPSFGAAGIANKSSFGSSYMADGTNGLLPPPPGAVPVTSNIMPPLKPPPGRAVPLPPEPPSSFKAPSSMAGPPPPPPPAPPPSSRPPGNAVCPPGVPPPPPPAPGNKAGPRPPPPPLRSGAAAPRPPPLAPKGANPPRAPKFGEDGSMDDGANKAKLKPFFWDKVLANPDNTMVWHQLKAGSFQFNEEMIETLFGYTPVVDKNKSEGKKESSSQDPAHQYIQIIDSKKAQNLSILLRALNVTREEVCDALHEGTELPSELLENLLRMAPTPEEELKLRLFSGEPSQLGTAERFLKCLVDIPFAFKRLETLLFMGTLQEDITITKESFVNLEVACRELRSSRLFLKLLEAVLKTGNRMNVGTFRGGAQAFKLDTLLKLSDVKGKDGKTTLLHFVVLEIIRTEGMRAARNGTGSHSFSSSSSKELLDRVLSDTEEHYRVLGLQVVSCLSGELQNVKKAATIDADALTGTVSKLGHALLRTRDFLNKDMQGLGEESKFHETLKGFVQSAEVGIMALLEEEKRIMELVKSTGDYFHGNAGKDEGLRLFVIVRDFLIMLDKTCREVKDAQKKQAKGHRKVASSSDIQHPIQHPISTPVSPDTNHPPSTPVSSDINQPPPTPVSSDVKHPPPPPTPVSSNIKYPPPPPPPVVSNTHPPPSSDFNQLIFPAITDRRMGSSSSDDE 995
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8056654 8062810 - MC11g0947 Mch11g1148 680082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1148 995 MobiDBLite consensus disorder prediction 249 278 - -
Mch11g1148 995 MobiDBLite consensus disorder prediction 896 910 - -
Mch11g1148 995 Gene3D Formin, FH2 domain 470 900 IPR042201 -
Mch11g1148 995 SUPERFAMILY Formin homology 2 domain (FH2 domain) 414 889 - -
Mch11g1148 995 MobiDBLite consensus disorder prediction 882 995 - -
Mch11g1148 995 Pfam Formin Homology 2 Domain 470 871 IPR015425 -
Mch11g1148 995 SMART it6_source 464 885 IPR015425 -
Mch11g1148 995 MobiDBLite consensus disorder prediction 346 452 - -
Mch11g1148 995 MobiDBLite consensus disorder prediction 923 967 - -
Mch11g1148 995 MobiDBLite consensus disorder prediction 262 278 - -
Mch11g1148 995 PANTHER FORMIN-RELATED 148 888 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Mch11g1148 995 MobiDBLite consensus disorder prediction 340 468 - -
Mch11g1148 995 ProSiteProfiles Formin homology-2 (FH2) domain profile. 464 897 IPR015425 -
Mch11g1148 995 MobiDBLite consensus disorder prediction 166 216 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1148 Mch-Chr11:8056654 Mch2g1335 Mch-Chr2:9454495 4.01E-112 dispersed
Mch6g2051 Mch-Chr6:22799524 Mch11g1148 Mch-Chr11:8056654 2.20E-107 transposed
Mch6g2239 Mch-Chr6:24610220 Mch11g1148 Mch-Chr11:8056654 1.03E-105 transposed
Mch8g2030 Mch-Chr8:22748501 Mch11g1148 Mch-Chr11:8056654 4.59E-84 transposed
Mch9g2201 Mch-Chr9:22560713 Mch11g1148 Mch-Chr11:8056654 5.75E-84 transposed
Mch11g1148 Mch-Chr11:8056654 Mch2g0617 Mch-Chr2:4239331 5.71E-168 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1148 K28090 - csv:101213072 1300.8