Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1162 ATGGCAAAATTAGGGTTTGCATTTGGGGTTTTGATGTGTTTGATGGTGTTGGTAAAGGAAGGTGATGGCACTGAGTTCACTGTGGGAGGAGCCAAGGGGTGGTCTCTTCCAATGGCTCAAACCTATAATCAATGGGCAGAAGCAAACAGGTTCCAAATCGGAGACTCTTTAGTCTTCAACTATGCTGCTGATGAAGACTCAGTGCTTCAAGTAACCCAAGATGAGTACAACAGTTGCAGCATCCAATCACCAATCAAACAGTTCTCTGATGGCCACACTGTTTTCCAGTTTGACAAATCTGGGCCTTACTATTTCATCAGTGGAAACAAAGACAATTGCCTCAAAAATGAGAAGCTGGCGGTGGTTGTTTTGGCTGATAGAAGCAATTCAACTTCTAATCAGACCATCACTCTGCCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTGCACCAGCAAATGATCAAACTGGCACAGCTTCTCCCCCACCGTCCGGGTCGGGATCGACTGAAATCATCCCTTCTCCCCCACCTGCTGAGGAAGTCAGTCCATCTCCAGCGCCTACTGGGGAAGAGTCTCCGCCTGCAGGGATGTCTGCGATTAACCCTACGCCACCTCCTCTCTTGGTACAACCACCTCCGAGTGTCGGATTTTCGATCATCCCCAGCAGCATTGGCTCCATTGGAGCCTTTGTTGCTGTTGCTATATTAGCTTTC 723 48.55 MAKLGFAFGVLMCLMVLVKEGDGTEFTVGGAKGWSLPMAQTYNQWAEANRFQIGDSLVFNYAADEDSVLQVTQDEYNSCSIQSPIKQFSDGHTVFQFDKSGPYYFISGNKDNCLKNEKLAVVVLADRSNSTSNQTITLPPSPSPSPSPSPSPAPANDQTGTASPPPSGSGSTEIIPSPPPAEEVSPSPAPTGEESPPAGMSAINPTPPPLLVQPPPSVGFSIIPSSIGSIGAFVAVAILAF 241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8155706 8157160 + MC11g0958 Mch11g1162 680096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1162 241 Gene3D - 24 136 IPR008972 -
Mch11g1162 241 FunFam Early nodulin-like protein 1 23 128 - -
Mch11g1162 241 PANTHER BLUE COPPER PROTEIN 13 152 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Mch11g1162 241 MobiDBLite consensus disorder prediction 154 170 - -
Mch11g1162 241 MobiDBLite consensus disorder prediction 129 216 - -
Mch11g1162 241 SUPERFAMILY Cupredoxins 23 124 IPR008972 -
Mch11g1162 241 MobiDBLite consensus disorder prediction 139 153 - -
Mch11g1162 241 ProSiteProfiles Phytocyanin domain profile. 24 125 IPR003245 GO:0009055(InterPro)
Mch11g1162 241 MobiDBLite consensus disorder prediction 179 193 - -
Mch11g1162 241 MobiDBLite consensus disorder prediction 201 215 - -
Mch11g1162 241 Pfam Plastocyanin-like domain 34 115 IPR003245 GO:0009055(InterPro)
Mch11g1162 241 CDD OsENODL1_like 24 124 IPR041846 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1234 Mch-Chr10:9925258 Mch11g1162 Mch-Chr11:8155706 1.50E-51 dispersed
Mch11g1162 Mch-Chr11:8155706 Mch2g0644 Mch-Chr2:4414939 1.82E-35 dispersed
Mch11g1162 Mch-Chr11:8155706 Mch8g3069 Mch-Chr8:33175679 2.03E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1162 - - - 0.0