Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1168 TTTTCGACCATGATCTGCGCTGTGAAACAATCTCCTAGGGCTGTTAATTGCTCTGATGGGTTCATTCGGAGAAAAATCTCGGTCCCCTCTCAGCGATCCTCGTTTCTTCCTCCTCTACCGGTGCAAAAACCTGCTCGAAATTCCGCTGTTTCCGTTCAGAAGGCTTTACACGTTTCTTCGCTTGAGAATTTTGGATCACTGGGAGTTCGTAAAGCTAATTTGATCAAATGCGAAGCTTACGAGGCCGAGCGATCGCAGCCGATCGAATCGAGCATTGAGTTGCCGCAGAGTCAGGTCCCTTCCGAGGCCGCGAAGAAGGTGAAAATAGGATCGTATTTCGCTCTCTGGTGGGCTTTGAACGTCGTCTTCAATATCTACAACAAGAAAGTTCTGAACGCGTATCCATATCCATGGCTGACCTCGACCCTGTCGCTTGCCGCTGGATCTCTGATCATGTTGATCTCGTGGATGACGAAAATTGCTGAGGCGCCCAAAACCGATTTCGATTTTTGGAAGTCTTTGTTTCCTGTTGCTGTTGCCCATACAATTGGACATGTTGCTGCAACTGTGAGCATGTCAAAGGTTGCAGTTTCATTCACTCACATCATCAAGAGTGGCGAGCCTGCTTTTAGCGTATTGGTTTCAAGGTTCTTGTTGGGCGAGACCTTCCCGCTTCCTGTCTACTTGTCGCTTCTCCCAATTATCGGCGGGTGCGCTCTCGCTGCTGTCACCGAGCTCAACTTTAACATGATTGGTTTCATGGGGGCCATGATATCGAACTTGGCATTTGTATTCCGTAACATATTCTCGAAGAGAGGCATGAAGGGAAAATCTGTTAGCGGGATGAACTACTATGCATGTTTATCGATTTTGTCTTTGTTAATCCTGACGCCATTTGCATTTGCTGTGGAGGGACCACAGTTATGGGCTGCTGGGTGGCAAACGGCAGTATCTCAAATTGGACCTCATTTTGTTTGGTGGGTTGCAGCACAAAGTATATTCTACCATCTCTATAACCAGGTGTCTTACATGTCCTTGGATGAGATTTCTCCCTTGACGTTTAGCATCGGAAACACCATGAAACGTATATCGGTCATAGTTTCTTCCATCATCATCTTCCGCACACCTGTGCAGCCTGTCAACGCTCTTGGAGCTGCCATTGCAGTTCTCGGAACCTTTATATATTCGCAG 1191 47.27 FSTMICAVKQSPRAVNCSDGFIRRKISVPSQRSSFLPPLPVQKPARNSAVSVQKALHVSSLENFGSLGVRKANLIKCEAYEAERSQPIESSIELPQSQVPSEAAKKVKIGSYFALWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLIMLISWMTKIAEAPKTDFDFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSILSLLILTPFAFAVEGPQLWAAGWQTAVSQIGPHFVWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAVLGTFIYSQ 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8215615 8218145 + MC11g0964 Mch11g1168 680102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1168 397 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 108 397 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Mch11g1168 397 Pfam Triose-phosphate Transporter family 108 396 IPR004853 -
Mch11g1168 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 149 243 - -
Mch11g1168 397 PANTHER SOLUTE CARRIER FAMILY 35 103 397 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1168 Mch-Chr11:8215615 Mch1g1894 Mch-Chr1:18908375 2.70E-74 dispersed
Mch10g1237 Mch-Chr10:9967891 Mch11g1168 Mch-Chr11:8215615 4.61E-233 transposed
Mch5g0285 Mch-Chr5:1948274 Mch11g1168 Mch-Chr11:8215615 4.13E-108 transposed
Mch1g1770 Mch-Chr1:18083541 Mch11g1168 Mch-Chr11:8215615 2.94E-194 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1168 K15283 - csv:101220046 722.62