Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g1191 | TTCATGGTTGAATTAGACCTCGAGATCCCATCTGCTTTCGACCCATTCGCTGAGGCCAGGGATTCTGATGCCCCCGGGAACAAGGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGTAAAAAGTGCTTGACAACAGTTCAGGGTCTGAAGAAGCAGTTCAGCTACGAGAAGATCCTCAAAGACGTCAAGAAAGAGTTCTGCTGCAATGGAAACGTGGTCCAAGACAAAGAACTGGGGAAGATAATTCAACTTCAGGGCGATCAGCGCAAGAACGTCTCCCAATTCCTGGTTCAGGCTGGACTTGTCAAGAAAGATCAGATCAAGATTCATGGGTTT | 339 | 47.79 | FMVELDLEIPSAFDPFAEARDSDAPGNKEYVHIRVQQRNGKKCLTTVQGLKKQFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF | 113 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8371201 | 8371539 | - | MC11g0982 | Mch11g1191 | 680125 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g1191 | 113 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 31 | 101 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Mch11g1191 | 113 | PIRSF | Transl_init_SUI1_Euk | 2 | 113 | IPR005874 | GO:0003743(InterPro) | |
Mch11g1191 | 113 | CDD | eIF1_SUI1 | 29 | 112 | IPR005874 | GO:0003743(InterPro) | |
Mch11g1191 | 113 | FunFam | Eukaryotic translation initiation factor SUI1 | 3 | 113 | - | - | |
Mch11g1191 | 113 | NCBIfam | translation initiation factor SUI1 | 8 | 113 | IPR005874 | GO:0003743(InterPro) | |
Mch11g1191 | 113 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 3 | 113 | - | GO:0003723(PANTHER) | |
Mch11g1191 | 113 | Gene3D | - | 2 | 113 | - | - | |
Mch11g1191 | 113 | Pfam | Translation initiation factor SUI1 | 28 | 102 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Mch11g1191 | 113 | SUPERFAMILY | eIF1-like | 5 | 113 | IPR036877 | GO:0003743(InterPro)|GO:0006413(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g1271 | Mch-Chr10:10438393 | Mch11g1191 | Mch-Chr11:8371201 | 2.22E-73 | dispersed | |
Mch11g1191 | Mch-Chr11:8371201 | Mch4g0230 | Mch-Chr4:1481838 | 4.07E-57 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g1191 | K03113 | - | csv:101202908 | 219.55 |