Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1191 TTCATGGTTGAATTAGACCTCGAGATCCCATCTGCTTTCGACCCATTCGCTGAGGCCAGGGATTCTGATGCCCCCGGGAACAAGGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGTAAAAAGTGCTTGACAACAGTTCAGGGTCTGAAGAAGCAGTTCAGCTACGAGAAGATCCTCAAAGACGTCAAGAAAGAGTTCTGCTGCAATGGAAACGTGGTCCAAGACAAAGAACTGGGGAAGATAATTCAACTTCAGGGCGATCAGCGCAAGAACGTCTCCCAATTCCTGGTTCAGGCTGGACTTGTCAAGAAAGATCAGATCAAGATTCATGGGTTT 339 47.79 FMVELDLEIPSAFDPFAEARDSDAPGNKEYVHIRVQQRNGKKCLTTVQGLKKQFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8371201 8371539 - MC11g0982 Mch11g1191 680125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1191 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Mch11g1191 113 PIRSF Transl_init_SUI1_Euk 2 113 IPR005874 GO:0003743(InterPro)
Mch11g1191 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743(InterPro)
Mch11g1191 113 FunFam Eukaryotic translation initiation factor SUI1 3 113 - -
Mch11g1191 113 NCBIfam translation initiation factor SUI1 8 113 IPR005874 GO:0003743(InterPro)
Mch11g1191 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 3 113 - GO:0003723(PANTHER)
Mch11g1191 113 Gene3D - 2 113 - -
Mch11g1191 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Mch11g1191 113 SUPERFAMILY eIF1-like 5 113 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1271 Mch-Chr10:10438393 Mch11g1191 Mch-Chr11:8371201 2.22E-73 dispersed
Mch11g1191 Mch-Chr11:8371201 Mch4g0230 Mch-Chr4:1481838 4.07E-57 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1191 K03113 - csv:101202908 219.55