Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g1202 | ATGGAGTGGACCAGAGGCCCCGCCGTCGGCCGCGGCTCGTCGGCAACCGTCTATTTGGCCACAGCCGCCTCTTCCGGCCACCAATTCGCCGTTAAATCCACTGACCTCTCTTCGTCGGCGTTTTTGCAGAAAGAACACGCTCTTCTCTCCAATTTGAGCTCCCCATTCGTGATCAAGTGTTTCGGGTTCGAAATCGAAACCGAATCCTTCAAGCCGGCGGTGTTCAATCTGTTCATGGAGTATTTGCCGGAGTCGCTGTGGGATGCGATTCAGAGCCACGGCGGCCGGATGGGGGAACCGATGATCGGAGCATATACGCGGCAGATTCTCAAAGGCTTGGAGTATCTCCACGCCAATAAATTGGCACATTGCGATATCAAGAGCCGGAATCTGTTAATGGGTGAAAGTGGACTCAAAATCGCCGATCTGGGTTGTGCGAAATTTGTGGACAGAGTCGCCGGAATTGGAGATGGGGGTTTTTCCGGTACGCCGGCGTTCATGGCGCCGGAGGTTGCGAGGGGTGAGGAACAGGGGTTTGCGGCGGATGTTTGGGCCGTTGGATGTACTGTCATCGAGATGGCCACCGGCGACCGTCCGTGGCCGGAGATGGATGATCCGGTGGCGGCTCTGTATAAAATTGGGTTTTCCGGCGAGTCGCCGGAGGTTCCGGTGTGGTTTTCGGAGAGGGCAAAGGATTTTGTCGCCAACTGTTTGATAAAAGACCCCAAAGAACGATGGACGGCGAAAGAGCTTCTTGAGCATCCGTTTCTTCAGGGCTTTGATTCTGAATCGCAAATCGAATGCTCGAGGAAGAAGACGACGGATTTGGGTTCTTCTCCGAGCTGCGTTTTGGATCAGAGCTTCTGGGATTCAATGGAGGATTCGGAAACTCCATTAAAGCTGATCGATCAAGCTCCTTGGTCGGATCCTCCGGCTGAGAGGATCAGAAGATTGAGTGGAAATTCGTCTGATTTGGATTGGGAATGGGATGATCGAGATTGGATCATGGTCAGAAACAATGGCGTCGGCGGAGGAAGCCATGGAAATGGATCTGTGAGCTCAGATTCATCTCTGACAGTTGAAGAAGAAGAAGGAGAAGGGGAAAATCTCAACGTAGAAGAAGATTTTGTGCTGTTTTGTTTAGGTGAGGATTATTTTATTAGTAGTGTAAATAGTGGGAGAGGAGGATTAGAAGTGAGATTTGAGTGTGATTTTGTGTTGGAAATTGTGGAATTTGGAGGACCAAATGAGTATTGTTCTTCTTCATTAATGCAAATTGATCTCTTGTTGTTTCATGATCTT | 1302 | 50.15 | MEWTRGPAVGRGSSATVYLATAASSGHQFAVKSTDLSSSAFLQKEHALLSNLSSPFVIKCFGFEIETESFKPAVFNLFMEYLPESLWDAIQSHGGRMGEPMIGAYTRQILKGLEYLHANKLAHCDIKSRNLLMGESGLKIADLGCAKFVDRVAGIGDGGFSGTPAFMAPEVARGEEQGFAADVWAVGCTVIEMATGDRPWPEMDDPVAALYKIGFSGESPEVPVWFSERAKDFVANCLIKDPKERWTAKELLEHPFLQGFDSESQIECSRKKTTDLGSSPSCVLDQSFWDSMEDSETPLKLIDQAPWSDPPAERIRRLSGNSSDLDWEWDDRDWIMVRNNGVGGGSHGNGSVSSDSSLTVEEEEGEGENLNVEEDFVLFCLGEDYFISSVNSGRGGLEVRFECDFVLEIVEFGGPNEYCSSSLMQIDLLLFHDL | 434 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8465163 | 8466464 | - | MC11g0993 | Mch11g1202 | 680136 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g1202 | 434 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 273 | IPR011009 | - | |
Mch11g1202 | 434 | CDD | STKc_MAPKKK | 2 | 257 | - | - | |
Mch11g1202 | 434 | PANTHER | CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED | 2 | 258 | IPR052751 | GO:0004672(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER) | |
Mch11g1202 | 434 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 121 | 133 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch11g1202 | 434 | Gene3D | Transferase(Phosphotransferase) domain 1 | 2 | 302 | - | - | |
Mch11g1202 | 434 | ProSiteProfiles | Protein kinase domain profile. | 3 | 257 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch11g1202 | 434 | MobiDBLite | consensus disorder prediction | 344 | 358 | - | - | |
Mch11g1202 | 434 | Pfam | Protein kinase domain | 6 | 257 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch11g1202 | 434 | SMART | serkin_6 | 3 | 257 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch11g1202 | 434 | MobiDBLite | consensus disorder prediction | 341 | 366 | - | - | |
Mch11g1202 | 434 | ProSitePatterns | Protein kinases ATP-binding region signature. | 9 | 32 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g1202 | Mch-Chr11:8465163 | Mch2g0539 | Mch-Chr2:3790771 | 8.87E-111 | dispersed | |
Mch1g1740 | Mch-Chr1:17944291 | Mch11g1202 | Mch-Chr11:8465163 | 2.43E-95 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77078 | PF00069 | Pkinase | 3.50E-51 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g1202 | K20716 | - | csv:101205426 | 547.74 |