Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1202 ATGGAGTGGACCAGAGGCCCCGCCGTCGGCCGCGGCTCGTCGGCAACCGTCTATTTGGCCACAGCCGCCTCTTCCGGCCACCAATTCGCCGTTAAATCCACTGACCTCTCTTCGTCGGCGTTTTTGCAGAAAGAACACGCTCTTCTCTCCAATTTGAGCTCCCCATTCGTGATCAAGTGTTTCGGGTTCGAAATCGAAACCGAATCCTTCAAGCCGGCGGTGTTCAATCTGTTCATGGAGTATTTGCCGGAGTCGCTGTGGGATGCGATTCAGAGCCACGGCGGCCGGATGGGGGAACCGATGATCGGAGCATATACGCGGCAGATTCTCAAAGGCTTGGAGTATCTCCACGCCAATAAATTGGCACATTGCGATATCAAGAGCCGGAATCTGTTAATGGGTGAAAGTGGACTCAAAATCGCCGATCTGGGTTGTGCGAAATTTGTGGACAGAGTCGCCGGAATTGGAGATGGGGGTTTTTCCGGTACGCCGGCGTTCATGGCGCCGGAGGTTGCGAGGGGTGAGGAACAGGGGTTTGCGGCGGATGTTTGGGCCGTTGGATGTACTGTCATCGAGATGGCCACCGGCGACCGTCCGTGGCCGGAGATGGATGATCCGGTGGCGGCTCTGTATAAAATTGGGTTTTCCGGCGAGTCGCCGGAGGTTCCGGTGTGGTTTTCGGAGAGGGCAAAGGATTTTGTCGCCAACTGTTTGATAAAAGACCCCAAAGAACGATGGACGGCGAAAGAGCTTCTTGAGCATCCGTTTCTTCAGGGCTTTGATTCTGAATCGCAAATCGAATGCTCGAGGAAGAAGACGACGGATTTGGGTTCTTCTCCGAGCTGCGTTTTGGATCAGAGCTTCTGGGATTCAATGGAGGATTCGGAAACTCCATTAAAGCTGATCGATCAAGCTCCTTGGTCGGATCCTCCGGCTGAGAGGATCAGAAGATTGAGTGGAAATTCGTCTGATTTGGATTGGGAATGGGATGATCGAGATTGGATCATGGTCAGAAACAATGGCGTCGGCGGAGGAAGCCATGGAAATGGATCTGTGAGCTCAGATTCATCTCTGACAGTTGAAGAAGAAGAAGGAGAAGGGGAAAATCTCAACGTAGAAGAAGATTTTGTGCTGTTTTGTTTAGGTGAGGATTATTTTATTAGTAGTGTAAATAGTGGGAGAGGAGGATTAGAAGTGAGATTTGAGTGTGATTTTGTGTTGGAAATTGTGGAATTTGGAGGACCAAATGAGTATTGTTCTTCTTCATTAATGCAAATTGATCTCTTGTTGTTTCATGATCTT 1302 50.15 MEWTRGPAVGRGSSATVYLATAASSGHQFAVKSTDLSSSAFLQKEHALLSNLSSPFVIKCFGFEIETESFKPAVFNLFMEYLPESLWDAIQSHGGRMGEPMIGAYTRQILKGLEYLHANKLAHCDIKSRNLLMGESGLKIADLGCAKFVDRVAGIGDGGFSGTPAFMAPEVARGEEQGFAADVWAVGCTVIEMATGDRPWPEMDDPVAALYKIGFSGESPEVPVWFSERAKDFVANCLIKDPKERWTAKELLEHPFLQGFDSESQIECSRKKTTDLGSSPSCVLDQSFWDSMEDSETPLKLIDQAPWSDPPAERIRRLSGNSSDLDWEWDDRDWIMVRNNGVGGGSHGNGSVSSDSSLTVEEEEGEGENLNVEEDFVLFCLGEDYFISSVNSGRGGLEVRFECDFVLEIVEFGGPNEYCSSSLMQIDLLLFHDL 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8465163 8466464 - MC11g0993 Mch11g1202 680136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1202 434 SUPERFAMILY Protein kinase-like (PK-like) 4 273 IPR011009 -
Mch11g1202 434 CDD STKc_MAPKKK 2 257 - -
Mch11g1202 434 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 258 IPR052751 GO:0004672(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Mch11g1202 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g1202 434 Gene3D Transferase(Phosphotransferase) domain 1 2 302 - -
Mch11g1202 434 ProSiteProfiles Protein kinase domain profile. 3 257 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g1202 434 MobiDBLite consensus disorder prediction 344 358 - -
Mch11g1202 434 Pfam Protein kinase domain 6 257 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g1202 434 SMART serkin_6 3 257 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g1202 434 MobiDBLite consensus disorder prediction 341 366 - -
Mch11g1202 434 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1202 Mch-Chr11:8465163 Mch2g0539 Mch-Chr2:3790771 8.87E-111 dispersed
Mch1g1740 Mch-Chr1:17944291 Mch11g1202 Mch-Chr11:8465163 2.43E-95 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77078 PF00069 Pkinase 3.50E-51 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1202 K20716 - csv:101205426 547.74