Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g1220 | ATGGCTTATACTTTGGAATCATGGACGAAGGAATACAATGAAGCTTTGAAACTCTCTGAAGATGTCAACAGCATGATTTCTGAGAGAAGTTCCCTTGCTGCATCCGGACCGGAATCGCAGCGCCATGCCTCAGCTATACGCAGGAAGATCACGATATTGGGTACCAGACTTGATACCTTACAGACTCAGTTACCCAAGCTTCAAGGAAAGCAACCAATATCAGAGAAAGAGATGAATCGCCGCAAGGACATGCTTGCAAATTTGAGATCAAAAACTAATCAGATGGCTTCAGCTTTGAACATGTCAAACTTTGCCAACCGCGATAGCTTACTTGGCCCAGAAATAAAACCAGCTGATGTCATGAGCAGATCAACAGGACTGGACAACCATGGCCTAGTTGAGCAAGATGAAGGCCTTGAGAAGCTGGAAGAGACTGTCATTAGCACAAAACATATTGCATTGGCTGTCAATGAAGAACTTGACCTTCACACCAGACTTATTGATGATTTGGATGAACACGTCGATGTTACAGATTCTCGATTGCGGCGAGTGCAGAAGAGGCTGACAATATTGAACAAGCGGACCAAGGGCGGTTGCACCTGCATGTGCATGCTTTTATCAGTTGTCGCGATTGTCATTCTTATCGCTGCCGTATGGCTACTCATCAAGTATTTGTAA | 678 | 44.69 | MAYTLESWTKEYNEALKLSEDVNSMISERSSLAASGPESQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPISEKEMNRRKDMLANLRSKTNQMASALNMSNFANRDSLLGPEIKPADVMSRSTGLDNHGLVEQDEGLEKLEETVISTKHIALAVNEELDLHTRLIDDLDEHVDVTDSRLRRVQKRLTILNKRTKGGCTCMCMLLSVVAIVILIAAVWLLIKYL | 225 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8635703 | 8638399 | + | MC11g1009 | Mch11g1220 | 680154 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g1220 | 225 | PANTHER | SYNTAXIN | 11 | 211 | IPR045242 | GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER) | |
Mch11g1220 | 225 | FunFam | syntaxin-51 isoform X2 | 132 | 193 | - | - | |
Mch11g1220 | 225 | Gene3D | - | 131 | 193 | - | - | |
Mch11g1220 | 225 | Pfam | SNARE domain | 166 | 215 | IPR000727 | - | |
Mch11g1220 | 225 | SUPERFAMILY | SNARE fusion complex | 132 | 190 | - | - | |
Mch11g1220 | 225 | CDD | SNARE_Qc | 134 | 188 | - | - | |
Mch11g1220 | 225 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 134 | 191 | IPR000727 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g1220 | K08503 | - | csv:101208669 | 376.326 |