Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1220 ATGGCTTATACTTTGGAATCATGGACGAAGGAATACAATGAAGCTTTGAAACTCTCTGAAGATGTCAACAGCATGATTTCTGAGAGAAGTTCCCTTGCTGCATCCGGACCGGAATCGCAGCGCCATGCCTCAGCTATACGCAGGAAGATCACGATATTGGGTACCAGACTTGATACCTTACAGACTCAGTTACCCAAGCTTCAAGGAAAGCAACCAATATCAGAGAAAGAGATGAATCGCCGCAAGGACATGCTTGCAAATTTGAGATCAAAAACTAATCAGATGGCTTCAGCTTTGAACATGTCAAACTTTGCCAACCGCGATAGCTTACTTGGCCCAGAAATAAAACCAGCTGATGTCATGAGCAGATCAACAGGACTGGACAACCATGGCCTAGTTGAGCAAGATGAAGGCCTTGAGAAGCTGGAAGAGACTGTCATTAGCACAAAACATATTGCATTGGCTGTCAATGAAGAACTTGACCTTCACACCAGACTTATTGATGATTTGGATGAACACGTCGATGTTACAGATTCTCGATTGCGGCGAGTGCAGAAGAGGCTGACAATATTGAACAAGCGGACCAAGGGCGGTTGCACCTGCATGTGCATGCTTTTATCAGTTGTCGCGATTGTCATTCTTATCGCTGCCGTATGGCTACTCATCAAGTATTTGTAA 678 44.69 MAYTLESWTKEYNEALKLSEDVNSMISERSSLAASGPESQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPISEKEMNRRKDMLANLRSKTNQMASALNMSNFANRDSLLGPEIKPADVMSRSTGLDNHGLVEQDEGLEKLEETVISTKHIALAVNEELDLHTRLIDDLDEHVDVTDSRLRRVQKRLTILNKRTKGGCTCMCMLLSVVAIVILIAAVWLLIKYL 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8635703 8638399 + MC11g1009 Mch11g1220 680154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1220 225 PANTHER SYNTAXIN 11 211 IPR045242 GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER)
Mch11g1220 225 FunFam syntaxin-51 isoform X2 132 193 - -
Mch11g1220 225 Gene3D - 131 193 - -
Mch11g1220 225 Pfam SNARE domain 166 215 IPR000727 -
Mch11g1220 225 SUPERFAMILY SNARE fusion complex 132 190 - -
Mch11g1220 225 CDD SNARE_Qc 134 188 - -
Mch11g1220 225 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 134 191 IPR000727 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1220 K08503 - csv:101208669 376.326