Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1232 ATGAGTAGCTGGAGGAAGTTTCCGGCAATGTGTGCTGCTTCTCGCACTCTGGTTCTGCTGTTTCCCCTGCTTCTTCACTCGTTCGTGGTGCTGGTCTCTGGTCAGGGATCTAACAATACCTCCCCATGGCAGACTCTCACTGGAGATCCTCCTTTTGTTGTGGCTCGTGGTGGATTTTCAGGGCTGTTTCCTGATTCAAGCTCAAATGCCTACAATCTGGCATTGATGGTTAGTGTCCCTGATGTGATCTTATGGTGTGATGTGCAATTAACTAAAGATGGAGTTGGAATTTGTCTCCCTGATCTGTTGCTTGACAATTGTACTAACGCTGCAAGCATTCTGGGGGCGAACCTCTCCAATGTCTATCTTGTTAATGGAGTTCGTACTGAGGGATTGTTTACGGTCGATTTCAATGCCCAAGATCTAGGGAATGTTTCTGTTACTCAAGCTATCTATTCTCGAAGTAATAAGTTTGATGGCAATGGGTTTCCAATTCTCGCTCCCGAAGACGTAGCTATGGATTTCAAGCCAACAGGACTTTGGCTGAATGTTCAGCATGATGCATTCTTCACCCAACAAAAGCTGAACATGAGGAACTTTGTCATTTCTCTATCCAAACGCATCATTATTAATTATATATCATCACCAGAGGTGGGATTTCTTAGAAGTATAGCTGCAAGGTTTAATCCTCGCACAACAAAGTTGATCTTTCGGGCTTTAGGGCCAAACGATGTTGAGATTACAACCAATCAGACATATGGTTCTCTCTTAAACAATCTCACCTTTATCAAGACATTTGCTTCTGGAATTATTGTTCCTAAGTTTTATATATGGCCCATTGGTAACGATAATTACTTACAGCCACAAACCTCTCTTGTTTCGGATGCTCATAAAGAACAGTTGGAAGTTTTTGCATCAGAGTTCTATAGTGACCTTCCAATAAGCTACAACTACAGTTATGATCCAATTACCGAGTACCTGTCTTACTTTGACAATGGCCAATTTTCAGTTGATGGTGTGCTGACTGATTTCCCTATTACTCCATCGGAAGCTATCGATTGTTTCGCTCACTTGGGTAAGGATGCGAAAAGTCGAGTCAAGCCTTTGGTTATTTCAAAATTTGGAGCTAGTGGAGACTATCCTGCTTGTACAGACTTGGCATATTCCCATGCTATTTCAGATGGTGTAGAAGTGCTCGACTGTCCTGTTCAAATTGCTAAGGATGGAACACCATTCTGCATGAGCTCAATTAATCTTATAGATAGCACAACAATATTTCAAACACCATTCATTACTCGTTCAAAAAAAATCCCCGCAATTAATCCTAATGATGGAATATTTGCTTTTGACTTAACATGGGACGAGATTCAAACCCTGACCCCGTCAATATTGAACCCCTTTTCAAGGTTCTTGTTGTTTCGAAATCCAAGGTTCCGAAACAGTGGGAAATTTCTAACGCTACCTGATTTCTTGGCCTTGGCAAAGAATGCAAGCACTCTTTCTGGTGTCTTGATCAAAATTGAGAATGCAGCCTACCTAGCTGAGGAGCAGGGTTTTAGTGTAACTGATGTGGTCTTAGATTCCTTGAGCAAAGCTGGTTATGATAATCAGACAGCCCTGAAAGTGATGATTGAATCCCCAAATAGTGCTGTTCTAATAAAATTTAAACAGGAAAATAAAAATTACGAGCTTGTTTATGATGTGGACGAGTCAATTAGTAATGTGCTTAATTCAACTGTTGAGGACATCAAGAATTTTGCCGACTCTGTGGTTATCAGCAAGACCTCTGTCTTTCCTGTGAATCAGCTATTTCTCACTGGATCTACAAATGTTGTGAAGAAGCTGAAATCATCTAATCTCTCTGTATATGTGGAATCCTTCAGCAATGAGTTTGTCTCTCAAGCATGGGATTTCTTTTCAGATGCAACAGTAGAGATCAACTCATATGTTATGGGAGCCAACATCGATGGAGTCATCACCGACTTTCCAAAGACGTCTGCTAGATATAAAAAGAACCACTGTTTAAGTATGAAACCAACACCTTCTTACATGAGCCCTGTCGAACCTGGTAGTTTGTTGCAACTGGTTACTGCCGAGTACATGCCTCCAAAGGTTGCTCCGAGCCCTGTTCTGGACGACAAAGACGTAGCTGAGCCACCATTACCTCAGGTCGCGAGCAGAGCTCCGCCACCTGCTGCGGGAGGAGGTGGCTCTACAGCAGCACCTCCACCTACACGCAATGGACAGCCCAAGCTTGGAGCTGGTACAGGCTTCTTCCTCTTGAACCTTGCCATGCTTCTCATTGCTCTTCTTCCATTCTGA 2322 42.68 MSSWRKFPAMCAASRTLVLLFPLLLHSFVVLVSGQGSNNTSPWQTLTGDPPFVVARGGFSGLFPDSSSNAYNLALMVSVPDVILWCDVQLTKDGVGICLPDLLLDNCTNAASILGANLSNVYLVNGVRTEGLFTVDFNAQDLGNVSVTQAIYSRSNKFDGNGFPILAPEDVAMDFKPTGLWLNVQHDAFFTQQKLNMRNFVISLSKRIIINYISSPEVGFLRSIAARFNPRTTKLIFRALGPNDVEITTNQTYGSLLNNLTFIKTFASGIIVPKFYIWPIGNDNYLQPQTSLVSDAHKEQLEVFASEFYSDLPISYNYSYDPITEYLSYFDNGQFSVDGVLTDFPITPSEAIDCFAHLGKDAKSRVKPLVISKFGASGDYPACTDLAYSHAISDGVEVLDCPVQIAKDGTPFCMSSINLIDSTTIFQTPFITRSKKIPAINPNDGIFAFDLTWDEIQTLTPSILNPFSRFLLFRNPRFRNSGKFLTLPDFLALAKNASTLSGVLIKIENAAYLAEEQGFSVTDVVLDSLSKAGYDNQTALKVMIESPNSAVLIKFKQENKNYELVYDVDESISNVLNSTVEDIKNFADSVVISKTSVFPVNQLFLTGSTNVVKKLKSSNLSVYVESFSNEFVSQAWDFFSDATVEINSYVMGANIDGVITDFPKTSARYKKNHCLSMKPTPSYMSPVEPGSLLQLVTAEYMPPKVAPSPVLDDKDVAEPPLPQVASRAPPPAAGGGGSTAAPPPTRNGQPKLGAGTGFFLLNLAMLLIALLPF 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8732080 8739808 + MC11g1020 Mch11g1232 680166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1232 773 ProSiteProfiles GP-PDE domain profile. 51 352 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Mch11g1232 773 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 19 747 - GO:0008889(PANTHER)
Mch11g1232 773 SUPERFAMILY PLC-like phosphodiesterases 367 669 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Mch11g1232 773 Pfam Glycerophosphoryl diester phosphodiesterase family 375 665 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Mch11g1232 773 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 49 351 - -
Mch11g1232 773 CDD GDPD_SHV3_repeat_1 51 351 - -
Mch11g1232 773 CDD GDPD_SHV3_repeat_2 368 669 - -
Mch11g1232 773 Gene3D Phosphatidylinositol (PI) phosphodiesterase 50 351 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Mch11g1232 773 Gene3D Phosphatidylinositol (PI) phosphodiesterase 366 669 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Mch11g1232 773 SUPERFAMILY PLC-like phosphodiesterases 50 351 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Mch11g1232 773 MobiDBLite consensus disorder prediction 707 750 - -
Mch11g1232 773 ProSiteProfiles GP-PDE domain profile. 368 670 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Mch11g1232 773 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 366 670 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1232 Mch-Chr11:8732080 Mch1g1480 Mch-Chr1:16341037 7.85E-194 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1232 - - - 0.0