Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g1233 | ATGCCGGAGAAAGAGAGTCACAGCGCTGTTGCAGAGCCCCGCCTGGTGGCCAGAAAGTTTCTGGCCAGGCCCCAGCATGAAGGATTGGGCGCCATTGTTAGAAGGAGCATTGGAAGGTTTGAGCTGAAATATTTTGACCCTTTTCTGGTTTTGGATGAATTTTCAGTTACTGCCCCAGCTGGATTTCCTGATCATCCACACAGAGGATTTGAGACAGTGACCTACATGTTACAGGGAAGTGTGACCCATGAAGATTTTGAAGGCCACAAGGGAACAATTGGTGCAGGTGACATACAGTGGATGACTGCAGGAAGAGGGATTGTTCATTCAGAAATGCCTGCATCCCAAGGCACCCAAAAGGGCCTCCAGCTTTGGATCAACCTCTCTTCCAAGAATAAAATGATTGAACCAAATTACCAAGAAGTTTCAAGCAAGGAAATCCCAGAAGCTTCAAAAGATGGAGTGAGAGTGAAAGTCATAGCTGGTGAGGCATTGGGAGCAAAATCACCAATATACACAAGAACTCCAACCATGTACTTGGACTTCACTCTCAACCCAAAAGCTCATCTCCAACACCCGATCCCGTCGTCCTGGAATGCGTTTGTTTACGTTCTAGAAGGCGAAGGTGTGTTTGGGAGCTCAAAGTCGGCGCCCGCGATGGCTCATAACCTTCTGCTGCTCGGTTTCGGGGACGGTTTAGAGGTCTGGAACAAGTCAAGCAAGCCTCTGAGGTTTGTTTTGGTTGGAGGTGAACCATTGAGTGAGCCTGTTGTGCAATTTGGGCCATTTGTGATGAACACTCAAGAAGAAATTGACCAAACTATTGATGATTTTGATAACTTTACTAATGGGTTTGAGAAAGCAAGGCATTGGAGATCAGAAGCTGCACTTACTCTTGGGTTCTAA | 906 | 46.8 | MPEKESHSAVAEPRLVARKFLARPQHEGLGAIVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGSVTHEDFEGHKGTIGAGDIQWMTAGRGIVHSEMPASQGTQKGLQLWINLSSKNKMIEPNYQEVSSKEIPEASKDGVRVKVIAGEALGAKSPIYTRTPTMYLDFTLNPKAHLQHPIPSSWNAFVYVLEGEGVFGSSKSAPAMAHNLLLLGFGDGLEVWNKSSKPLRFVLVGGEPLSEPVVQFGPFVMNTQEEIDQTIDDFDNFTNGFEKARHWRSEAALTLGF | 301 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8743503 | 8747086 | + | MC11g1021 | Mch11g1233 | 680167 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g1233 | 301 | Gene3D | Jelly Rolls | 148 | 253 | IPR014710 | - | |
Mch11g1233 | 301 | SUPERFAMILY | RmlC-like cupins | 14 | 293 | IPR011051 | - | |
Mch11g1233 | 301 | PANTHER | PIRIN-RELATED | 7 | 294 | IPR012093 | - | |
Mch11g1233 | 301 | CDD | cupin_pirin_C | 176 | 252 | - | - | |
Mch11g1233 | 301 | Gene3D | Jelly Rolls | 27 | 279 | IPR014710 | - | |
Mch11g1233 | 301 | FunFam | pirin | 27 | 164 | - | - | |
Mch11g1233 | 301 | Pfam | Pirin | 33 | 126 | IPR003829 | - | |
Mch11g1233 | 301 | Pfam | Pirin C-terminal cupin domain | 179 | 283 | IPR008778 | - | |
Mch11g1233 | 301 | CDD | cupin_pirin_N | 31 | 128 | - | - | |
Mch11g1233 | 301 | PIRSF | Pirin | 12 | 292 | IPR012093 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g1233 | Mch-Chr11:8743503 | Mch5g0867 | Mch-Chr5:6247404 | 1.74E-152 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g1233 | K06911 | - | csv:101216351 | 568.926 |