Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1233 ATGCCGGAGAAAGAGAGTCACAGCGCTGTTGCAGAGCCCCGCCTGGTGGCCAGAAAGTTTCTGGCCAGGCCCCAGCATGAAGGATTGGGCGCCATTGTTAGAAGGAGCATTGGAAGGTTTGAGCTGAAATATTTTGACCCTTTTCTGGTTTTGGATGAATTTTCAGTTACTGCCCCAGCTGGATTTCCTGATCATCCACACAGAGGATTTGAGACAGTGACCTACATGTTACAGGGAAGTGTGACCCATGAAGATTTTGAAGGCCACAAGGGAACAATTGGTGCAGGTGACATACAGTGGATGACTGCAGGAAGAGGGATTGTTCATTCAGAAATGCCTGCATCCCAAGGCACCCAAAAGGGCCTCCAGCTTTGGATCAACCTCTCTTCCAAGAATAAAATGATTGAACCAAATTACCAAGAAGTTTCAAGCAAGGAAATCCCAGAAGCTTCAAAAGATGGAGTGAGAGTGAAAGTCATAGCTGGTGAGGCATTGGGAGCAAAATCACCAATATACACAAGAACTCCAACCATGTACTTGGACTTCACTCTCAACCCAAAAGCTCATCTCCAACACCCGATCCCGTCGTCCTGGAATGCGTTTGTTTACGTTCTAGAAGGCGAAGGTGTGTTTGGGAGCTCAAAGTCGGCGCCCGCGATGGCTCATAACCTTCTGCTGCTCGGTTTCGGGGACGGTTTAGAGGTCTGGAACAAGTCAAGCAAGCCTCTGAGGTTTGTTTTGGTTGGAGGTGAACCATTGAGTGAGCCTGTTGTGCAATTTGGGCCATTTGTGATGAACACTCAAGAAGAAATTGACCAAACTATTGATGATTTTGATAACTTTACTAATGGGTTTGAGAAAGCAAGGCATTGGAGATCAGAAGCTGCACTTACTCTTGGGTTCTAA 906 46.8 MPEKESHSAVAEPRLVARKFLARPQHEGLGAIVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGSVTHEDFEGHKGTIGAGDIQWMTAGRGIVHSEMPASQGTQKGLQLWINLSSKNKMIEPNYQEVSSKEIPEASKDGVRVKVIAGEALGAKSPIYTRTPTMYLDFTLNPKAHLQHPIPSSWNAFVYVLEGEGVFGSSKSAPAMAHNLLLLGFGDGLEVWNKSSKPLRFVLVGGEPLSEPVVQFGPFVMNTQEEIDQTIDDFDNFTNGFEKARHWRSEAALTLGF 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8743503 8747086 + MC11g1021 Mch11g1233 680167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1233 301 Gene3D Jelly Rolls 148 253 IPR014710 -
Mch11g1233 301 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
Mch11g1233 301 PANTHER PIRIN-RELATED 7 294 IPR012093 -
Mch11g1233 301 CDD cupin_pirin_C 176 252 - -
Mch11g1233 301 Gene3D Jelly Rolls 27 279 IPR014710 -
Mch11g1233 301 FunFam pirin 27 164 - -
Mch11g1233 301 Pfam Pirin 33 126 IPR003829 -
Mch11g1233 301 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
Mch11g1233 301 CDD cupin_pirin_N 31 128 - -
Mch11g1233 301 PIRSF Pirin 12 292 IPR012093 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1233 Mch-Chr11:8743503 Mch5g0867 Mch-Chr5:6247404 1.74E-152 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1233 K06911 - csv:101216351 568.926