Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1327 ATGTATGGAAGAAAAGCATGCCAGTTGGTGAAAGAGCTAGCAAACGGCGAGAAAGGTCAGCTAACGCACTTCAATAGCGACCTATTTGATCAGGTTATTTCAGAATGCGAGCAGCATCATCTTGAGCTTCAGTCCTTGATGAGGAAAATACAGGAAGAAGGGTTGGATCTACAGACTACTAAGAATGAAGATCACTTTGGTGCGCTCATTCACCACCTTTCACTAGTTCGCAATAAACGATGCCTTATGGCTTATGTGTATAATCGAGCTGAGATTATAAGAAGTTTGATATGGAAGGTAGGATCTATGCTTCCACCAGAAATACAAGAGAAGCTTAGCAACTCAGAGGAAGAGTATTTTAAGAAGCATTCTGCACGTCTAAAAGTATACATGTCGAGACTGGAGTTGGAATTGACTGTGGATATGGTGCCACCCAAGGATCCATATATCCAAGTGAGGGTACTCGATGATATCGGTGAAGGAATCATACTCAGTGATGATAAAACAGCAAACTTTGCACGTCATTCTATACATTTTCTTAAACGAACTGATGCTGAGCAATTCATTTCACGGGTGAGAATCCCTCCACTCCAAATTTCGTTTCGCAATTCTTATTATTGCTTGCTT 627 40.99 MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGLDLQTTKNEDHFGALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYFKKHSARLKVYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFLKRTDAEQFISRVRIPPLQISFRNSYYCLL 209
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9407021 9409493 + MC11g1099 Mch11g1327 680261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1327 209 CDD GINS_A_psf1 3 136 IPR005339 GO:0000811(InterPro)|GO:0006260(InterPro)
Mch11g1327 209 Pfam GINS complex protein helical bundle domain 61 134 IPR021151 -
Mch11g1327 209 PANTHER PARTNER OF SLD5 1 191 IPR005339 GO:0000811(InterPro)|GO:0000811(PANTHER)|GO:0006260(InterPro)|GO:1902983(PANTHER)
Mch11g1327 209 Coils Coil 33 63 - -
Mch11g1327 209 CDD GINS_B_Psf1 148 189 - -
Mch11g1327 209 Gene3D - 1 134 - -
Mch11g1327 209 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1327 Mch-Chr11:9407021 Mch9g0405 Mch-Chr9:3011479 4.11E-133 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1327 K10732 - csv:101205409 359.762