Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1353 ATGGCCGAGACCGGAGCCAGACGGCGGCATGAGCTCTCCACTCTGCTTCTTCTCTCACTTCTGCTCATCCTCCCTGTTTCCTCCGCCGGAGAAAACCTGTCGTTCAACTTCAACCACCGCAAGATCTCCACCATCGTCGGAAGTTCTTCCTCCGTTTCCAACTCCACCTACGCCGTCATCTTCGACGCCGGAAGCTCCGGCAGCCGCGTCCACGTCTTCCACTTCGACCAGAATCTCAATCTCCTCTTCATCGGTTCCGACATTGAAGTTTTCTCACAGATAAAACCGGGGCTGAGTTCATACGCCGACGATCCTCAGAAAGCCGCGGATTCTCTAATCCCCTTACTGGAGAAAGCAGAGAGCGCAGTTCCTCAAAAACTGCAATCCGTAACGCCTGTTCGCCTCGGGGCCACGGCAGGGCTGAGGTTTCTGGAAGGCGATAGATCTGAGAAGATTTTGGAAGCGGTTAGGGTTCTTCTGAAATCAAAGAGCGGATTCAAGTACGACGCGGATTCGGTTTCGATTCTCGACGGAAATCAAGAAGGTTCATATCAATGGTTGACAATAAACTATTTGCTGGAGAAATTGGGTACGAAATATTCGAACACCGTGGGAGTGATTGATCTCGGCGGCGGCTCCGTTCAAATGGCATATGCAATCTCCGACCAAGATGCCGCGAATGCGCCCATTTCTTCTGACGGAAGCTCCAAATTTGTTCAAAATTTGTACCTCAAGGGTGCTAAATATAACCTCTACGTTCACAGTTATTTGCATTATGGTTTACTAGCCTCCCGAGTAGAGATTTTGGAGGTGACCAAAGAGCTTGGCAACCCTTGCATTTTAGCTGGTTATGAAGGAACATACACGTACGATGGAAAGGAATACAAAGCATCAGCTTCCCAATCAGGGTCGAGCTTCGGTCGTTGCCGGAAGGTAATTTTAGAGGCGCTCAAAATCAACGAATCTTGCGGCTACAATGAGTGCTCGTTTGATGGTATTTGGAGCGGCGGCGGAGGAGCCGGCCAAAGGAATCTCTATGTTTCTTCCTTATTCTTTGACAAGGCGGCTCAGGTGGGTTTCATCGATGGCAACCAACCAGAAGCGGCAGTGAAGGTCATAGAATTCAAGAAAGCAGCCATGCTTGCTTGTCAAACTAAATATGTCGATGCAAAATCTAAATACCCTAATGTTTACTCAAGTGATGTGCAATACGTGTGCATGGATCTCGTTTACGAGTACACACTTCTCGTCGATGGATTCGGCATTGATTCTCAAAAGAAAATAACGTTGGTGAAGCAAGTGGCATATCATGGTTCCGTCGCGGAGGCTGCATGGCCATTAGGCAATGCCGTAGCCGTCGTCTCATCGTCCAAGTACTCGGCCGCAAATTAG 1392 49.07 MAETGARRRHELSTLLLLSLLLILPVSSAGENLSFNFNHRKISTIVGSSSSVSNSTYAVIFDAGSSGSRVHVFHFDQNLNLLFIGSDIEVFSQIKPGLSSYADDPQKAADSLIPLLEKAESAVPQKLQSVTPVRLGATAGLRFLEGDRSEKILEAVRVLLKSKSGFKYDADSVSILDGNQEGSYQWLTINYLLEKLGTKYSNTVGVIDLGGGSVQMAYAISDQDAANAPISSDGSSKFVQNLYLKGAKYNLYVHSYLHYGLLASRVEILEVTKELGNPCILAGYEGTYTYDGKEYKASASQSGSSFGRCRKVILEALKINESCGYNECSFDGIWSGGGGAGQRNLYVSSLFFDKAAQVGFIDGNQPEAAVKVIEFKKAAMLACQTKYVDAKSKYPNVYSSDVQYVCMDLVYEYTLLVDGFGIDSQKKITLVKQVAYHGSVAEAAWPLGNAVAVVSSSKYSAAN 463
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9672293 9697786 - MC11g1123 Mch11g1353 680287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1353 463 FunFam Apyrase 1 177 435 - -
Mch11g1353 463 CDD NBD_sugar-kinase_HSP70_actin 59 218 - -
Mch11g1353 463 Gene3D Exopolyphosphatase. Domain 2 177 435 - -
Mch11g1353 463 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 176 191 IPR000407 GO:0016787(InterPro)
Mch11g1353 463 Gene3D - 57 450 - -
Mch11g1353 463 Pfam GDA1/CD39 (nucleoside phosphatase) family 53 459 IPR000407 GO:0016787(InterPro)
Mch11g1353 463 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 15 454 IPR000407 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1353 Mch-Chr11:9672293 Mch1g0570 Mch-Chr1:9913272 2.85E-180 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1353 K14641 - cit:102627845 517.694