Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g1379 | ATGGTACCTTCAGGGCCATCCACTCCCATTGGTGGTGCGCAGTCTGTTTCACCATCGCTTTTGAGATCAAATTCTGGAATGATGGGAGCACAAGGAGGGCTGCCTTCTCAGTCAGCTTTTCCTTCTCTTGTATCCCCACGGACTCAGTTTAATAGTATGAATATGCTTGGCAATATGCCCAGTATGTCTTCTCTTCTTAATCAGTCGTTTGGGAATGGAGTTCCGAATTCTGGGCCCCCGGGTCTTGGAAACAGCCAACGAGGAGGTATGGACCCTAGTTCTGAGTCGGATCCCTTTTCACTTGTTGGCAATGGTGTGAACTTCAATAATACCTCAGCATCATTGGTGGCATCAAATACAGCAAACCCTGGTTCATCTAGTCAAGTTTCAGGGCCACAATTTTCAAACCATTCTAGCAGCCAAATAATACCCAATCAACAGCAGCAGCCACAGCAAATTGAGCCCCAGAACTTCCAACATAGTCAGCATTCAATGCAACAGTTCACTACCTCTAATAACGCACAGCAGTCACAGCAGCAGCAGCAACAACAACAACAACATCAATTCCAACCAATTCGAGGAAACTTATGTGGTGTTGGACCTGTCAAGTTAGAGCCTCAAATGAGTACTAATGATCTTCAAGGGCAGCAACTACAGCAGCAGCAGCAGCAGCAGTTGCAGTCAATGAGAAATCTTGGCCCTGTGAAACTGGAACCACAACAGCTTCAATCCATGAGAAACTTGGGTCCTGTTAAATTGGAACCTCAACAGTCTGATCAGTCATTGTTTCTACAGCAGCAACAGCAACAACAGCAACAGCAGTTACTTAGTATGTCTAGGCAGTCCTCTCAGGCTGCTGCTGCACAGATTAATCTTTTGCACCAACAAAGACTCTTGCAATTTCAACAGCATCAACAACTCCTGAAGGCTATGCCTCAGCAAAGACCGCATTTACCACAACAATTTCAACAACAAAATGTGCCATTGAGATCCCCTGTAAAACCAGTTTATGAACCTGGCATGTGTGCTCGACGTTTAACAAGTTATATGTATCAACAACAGCACAGGCCTGAAGACAACAATATTGAGTTCTGGAGGAAATTTGTTGCAGAGTACTTTGCTCCTCATGCCAAAAAGAAATGGTGTGTTTCCATGTATGGAAATGGTCGCCAAACAACTGGTGTATTTCCACAGGACGTTTGGCATTGTGAAATATGCAATCGCAAGCCTGGTCGAGGTTTTGAAGCAACTTTTGAAGTTCTTCCAAGGCTGTTCAAAATCAAGTATGAAAGTGGGACGCTAGAAGAACTTCTCTATGTTGATATGCCCCGTGAATATCATAATTCATCTGGACAAATTGTCCTAGATTATGCCAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGCCAACTTCGAATAGTTTTTTCTCCAGACTTAAAGATATGTTCTTGGGAATTTTGTGCTCGTCGTCATGAAGAGCTTATTCCTCGGAGGTTACTAATACCTCAGGTTAGTCAGCTGGGGGCAGCTGCTCAGAAGTATCAGACTGCTATTCAAAATGCATCATCTAACTTGTCTACTCCAGAGTTACAAACAAATTGCAATATGTTTGTGGGGTCAGCTCGACAATTGGCCAAGGCATTGGAAGTGCCATTAGTAAATGACTTGGGATATACGAAGAGATACGTCCGGTGCCTTCAGATATCAGAAGTCGTCAATAGTATGAAGGATTTGATAGATTACAGCCAAGAAACTTCGACTGGGCCAATTGAGAGTTTGGCCAAGTTTCCGCGAAAGACGAACGCTTCGCCAGGCTTCCACAGCCAACCTCAAAATACCGAGCAACAGTTACCTCAGCCTCAGCAAACAATGGATCAAAACACAAACGGTGACCAAAGCTCTGTTCAGGCTGCTTCTATGCAGCTTGCTGCTAACAGTGGTGTTACTGGAGCAAATAACTCTGTTAATCAAGCATCAACCTCATCTCCTGCTAGTACCATTGTTGGGTTACTCCACCAGAACTCCATGAACTCCAGACAGCAGAACTCTATGAACAGTGCAAGCAGCCCGTATGCTGCAAATTCTGCACAAATATCGTCCCCAGGTTCCTCCACCGTGATTGCTCAGGCACAAGCGAACTCGTCCTTCCAGTCGCCTACACTGTCCTCATCTGCCAATCCCCCACAATCATCAATTGGTACTGCAACAACTACCAATCACATGAGTGCCACTAATTCTCCGGCAAATGTTTCCTTGCAACAGCAGCCAACACACTCTTCTGAAGCTGATCAAAACGACTCCCAGAGTTCCGTGCAAAAGATCATTCAGGAATACATGATGTCGAACCAACTAAATGGGATGAACACAATGACTGGCATTTCCTCTCTAGGGGACGATGTGAAATCTGTTCACGGGATGCTGCCAACGAACAACATTATGAGCCTCAATGGACGGAACTGCCTCGTTGGGAGTGGAGCTGCTAATAGTGTATCTGGCATCAGGAGTGCTGGATATGGCTCGATGGGTGGGGGATTTTCTCAGGCTTCCATGGTCAATGGCATGAAGTCTGCAATGGGAAATAACTCGATTTCGAACGGGAGAATCGGGATGGCGTCATTGGCTCGAGAACAGAGCATAAACCATCAAGATTTGGGGGACCAGCTTCTTAACGGACTTGGAGTTAACGGGTTTAATAATCTTCAATTCGATTATTGA | 2733 | 45.08 | MVPSGPSTPIGGAQSVSPSLLRSNSGMMGAQGGLPSQSAFPSLVSPRTQFNSMNMLGNMPSMSSLLNQSFGNGVPNSGPPGLGNSQRGGMDPSSESDPFSLVGNGVNFNNTSASLVASNTANPGSSSQVSGPQFSNHSSSQIIPNQQQQPQQIEPQNFQHSQHSMQQFTTSNNAQQSQQQQQQQQQHQFQPIRGNLCGVGPVKLEPQMSTNDLQGQQLQQQQQQQLQSMRNLGPVKLEPQQLQSMRNLGPVKLEPQQSDQSLFLQQQQQQQQQQLLSMSRQSSQAAAAQINLLHQQRLLQFQQHQQLLKAMPQQRPHLPQQFQQQNVPLRSPVKPVYEPGMCARRLTSYMYQQQHRPEDNNIEFWRKFVAEYFAPHAKKKWCVSMYGNGRQTTGVFPQDVWHCEICNRKPGRGFEATFEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQTAIQNASSNLSTPELQTNCNMFVGSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSQETSTGPIESLAKFPRKTNASPGFHSQPQNTEQQLPQPQQTMDQNTNGDQSSVQAASMQLAANSGVTGANNSVNQASTSSPASTIVGLLHQNSMNSRQQNSMNSASSPYAANSAQISSPGSSTVIAQAQANSSFQSPTLSSSANPPQSSIGTATTTNHMSATNSPANVSLQQQPTHSSEADQNDSQSSVQKIIQEYMMSNQLNGMNTMTGISSLGDDVKSVHGMLPTNNIMSLNGRNCLVGSGAANSVSGIRSAGYGSMGGGFSQASMVNGMKSAMGNNSISNGRIGMASLAREQSINHQDLGDQLLNGLGVNGFNNLQFDY | 910 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9841805 | 9851987 | + | MC11g1140 | Mch11g1379 | 680313 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g1379 | 910 | MobiDBLite | consensus disorder prediction | 117 | 192 | - | - | |
Mch11g1379 | 910 | MobiDBLite | consensus disorder prediction | 723 | 775 | - | - | |
Mch11g1379 | 910 | MobiDBLite | consensus disorder prediction | 8 | 41 | - | - | |
Mch11g1379 | 910 | PANTHER | LIM DOMAIN-BINDING PROTEIN | 237 | 906 | IPR029005 | GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER) | |
Mch11g1379 | 910 | MobiDBLite | consensus disorder prediction | 596 | 642 | - | - | |
Mch11g1379 | 910 | MobiDBLite | consensus disorder prediction | 683 | 710 | - | - | |
Mch11g1379 | 910 | MobiDBLite | consensus disorder prediction | 117 | 227 | - | - | |
Mch11g1379 | 910 | MobiDBLite | consensus disorder prediction | 608 | 642 | - | - | |
Mch11g1379 | 910 | MobiDBLite | consensus disorder prediction | 64 | 105 | - | - | |
Mch11g1379 | 910 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Mch11g1379 | 910 | Pfam | LIM-domain binding protein | 345 | 599 | IPR029005 | - | |
Mch11g1379 | 910 | MobiDBLite | consensus disorder prediction | 207 | 227 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g1379 | Mch-Chr11:9841805 | Mch4g1830 | Mch-Chr4:21153202 | 0 | dispersed | |
Mch11g1379 | Mch-Chr11:9841805 | Mch10g0179 | Mch-Chr10:1067208 | 3.76E-107 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g1379 | - | - | - | 0.0 |