Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1379 ATGGTACCTTCAGGGCCATCCACTCCCATTGGTGGTGCGCAGTCTGTTTCACCATCGCTTTTGAGATCAAATTCTGGAATGATGGGAGCACAAGGAGGGCTGCCTTCTCAGTCAGCTTTTCCTTCTCTTGTATCCCCACGGACTCAGTTTAATAGTATGAATATGCTTGGCAATATGCCCAGTATGTCTTCTCTTCTTAATCAGTCGTTTGGGAATGGAGTTCCGAATTCTGGGCCCCCGGGTCTTGGAAACAGCCAACGAGGAGGTATGGACCCTAGTTCTGAGTCGGATCCCTTTTCACTTGTTGGCAATGGTGTGAACTTCAATAATACCTCAGCATCATTGGTGGCATCAAATACAGCAAACCCTGGTTCATCTAGTCAAGTTTCAGGGCCACAATTTTCAAACCATTCTAGCAGCCAAATAATACCCAATCAACAGCAGCAGCCACAGCAAATTGAGCCCCAGAACTTCCAACATAGTCAGCATTCAATGCAACAGTTCACTACCTCTAATAACGCACAGCAGTCACAGCAGCAGCAGCAACAACAACAACAACATCAATTCCAACCAATTCGAGGAAACTTATGTGGTGTTGGACCTGTCAAGTTAGAGCCTCAAATGAGTACTAATGATCTTCAAGGGCAGCAACTACAGCAGCAGCAGCAGCAGCAGTTGCAGTCAATGAGAAATCTTGGCCCTGTGAAACTGGAACCACAACAGCTTCAATCCATGAGAAACTTGGGTCCTGTTAAATTGGAACCTCAACAGTCTGATCAGTCATTGTTTCTACAGCAGCAACAGCAACAACAGCAACAGCAGTTACTTAGTATGTCTAGGCAGTCCTCTCAGGCTGCTGCTGCACAGATTAATCTTTTGCACCAACAAAGACTCTTGCAATTTCAACAGCATCAACAACTCCTGAAGGCTATGCCTCAGCAAAGACCGCATTTACCACAACAATTTCAACAACAAAATGTGCCATTGAGATCCCCTGTAAAACCAGTTTATGAACCTGGCATGTGTGCTCGACGTTTAACAAGTTATATGTATCAACAACAGCACAGGCCTGAAGACAACAATATTGAGTTCTGGAGGAAATTTGTTGCAGAGTACTTTGCTCCTCATGCCAAAAAGAAATGGTGTGTTTCCATGTATGGAAATGGTCGCCAAACAACTGGTGTATTTCCACAGGACGTTTGGCATTGTGAAATATGCAATCGCAAGCCTGGTCGAGGTTTTGAAGCAACTTTTGAAGTTCTTCCAAGGCTGTTCAAAATCAAGTATGAAAGTGGGACGCTAGAAGAACTTCTCTATGTTGATATGCCCCGTGAATATCATAATTCATCTGGACAAATTGTCCTAGATTATGCCAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGCCAACTTCGAATAGTTTTTTCTCCAGACTTAAAGATATGTTCTTGGGAATTTTGTGCTCGTCGTCATGAAGAGCTTATTCCTCGGAGGTTACTAATACCTCAGGTTAGTCAGCTGGGGGCAGCTGCTCAGAAGTATCAGACTGCTATTCAAAATGCATCATCTAACTTGTCTACTCCAGAGTTACAAACAAATTGCAATATGTTTGTGGGGTCAGCTCGACAATTGGCCAAGGCATTGGAAGTGCCATTAGTAAATGACTTGGGATATACGAAGAGATACGTCCGGTGCCTTCAGATATCAGAAGTCGTCAATAGTATGAAGGATTTGATAGATTACAGCCAAGAAACTTCGACTGGGCCAATTGAGAGTTTGGCCAAGTTTCCGCGAAAGACGAACGCTTCGCCAGGCTTCCACAGCCAACCTCAAAATACCGAGCAACAGTTACCTCAGCCTCAGCAAACAATGGATCAAAACACAAACGGTGACCAAAGCTCTGTTCAGGCTGCTTCTATGCAGCTTGCTGCTAACAGTGGTGTTACTGGAGCAAATAACTCTGTTAATCAAGCATCAACCTCATCTCCTGCTAGTACCATTGTTGGGTTACTCCACCAGAACTCCATGAACTCCAGACAGCAGAACTCTATGAACAGTGCAAGCAGCCCGTATGCTGCAAATTCTGCACAAATATCGTCCCCAGGTTCCTCCACCGTGATTGCTCAGGCACAAGCGAACTCGTCCTTCCAGTCGCCTACACTGTCCTCATCTGCCAATCCCCCACAATCATCAATTGGTACTGCAACAACTACCAATCACATGAGTGCCACTAATTCTCCGGCAAATGTTTCCTTGCAACAGCAGCCAACACACTCTTCTGAAGCTGATCAAAACGACTCCCAGAGTTCCGTGCAAAAGATCATTCAGGAATACATGATGTCGAACCAACTAAATGGGATGAACACAATGACTGGCATTTCCTCTCTAGGGGACGATGTGAAATCTGTTCACGGGATGCTGCCAACGAACAACATTATGAGCCTCAATGGACGGAACTGCCTCGTTGGGAGTGGAGCTGCTAATAGTGTATCTGGCATCAGGAGTGCTGGATATGGCTCGATGGGTGGGGGATTTTCTCAGGCTTCCATGGTCAATGGCATGAAGTCTGCAATGGGAAATAACTCGATTTCGAACGGGAGAATCGGGATGGCGTCATTGGCTCGAGAACAGAGCATAAACCATCAAGATTTGGGGGACCAGCTTCTTAACGGACTTGGAGTTAACGGGTTTAATAATCTTCAATTCGATTATTGA 2733 45.08 MVPSGPSTPIGGAQSVSPSLLRSNSGMMGAQGGLPSQSAFPSLVSPRTQFNSMNMLGNMPSMSSLLNQSFGNGVPNSGPPGLGNSQRGGMDPSSESDPFSLVGNGVNFNNTSASLVASNTANPGSSSQVSGPQFSNHSSSQIIPNQQQQPQQIEPQNFQHSQHSMQQFTTSNNAQQSQQQQQQQQQHQFQPIRGNLCGVGPVKLEPQMSTNDLQGQQLQQQQQQQLQSMRNLGPVKLEPQQLQSMRNLGPVKLEPQQSDQSLFLQQQQQQQQQQLLSMSRQSSQAAAAQINLLHQQRLLQFQQHQQLLKAMPQQRPHLPQQFQQQNVPLRSPVKPVYEPGMCARRLTSYMYQQQHRPEDNNIEFWRKFVAEYFAPHAKKKWCVSMYGNGRQTTGVFPQDVWHCEICNRKPGRGFEATFEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQTAIQNASSNLSTPELQTNCNMFVGSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSQETSTGPIESLAKFPRKTNASPGFHSQPQNTEQQLPQPQQTMDQNTNGDQSSVQAASMQLAANSGVTGANNSVNQASTSSPASTIVGLLHQNSMNSRQQNSMNSASSPYAANSAQISSPGSSTVIAQAQANSSFQSPTLSSSANPPQSSIGTATTTNHMSATNSPANVSLQQQPTHSSEADQNDSQSSVQKIIQEYMMSNQLNGMNTMTGISSLGDDVKSVHGMLPTNNIMSLNGRNCLVGSGAANSVSGIRSAGYGSMGGGFSQASMVNGMKSAMGNNSISNGRIGMASLAREQSINHQDLGDQLLNGLGVNGFNNLQFDY 910
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9841805 9851987 + MC11g1140 Mch11g1379 680313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1379 910 MobiDBLite consensus disorder prediction 117 192 - -
Mch11g1379 910 MobiDBLite consensus disorder prediction 723 775 - -
Mch11g1379 910 MobiDBLite consensus disorder prediction 8 41 - -
Mch11g1379 910 PANTHER LIM DOMAIN-BINDING PROTEIN 237 906 IPR029005 GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER)
Mch11g1379 910 MobiDBLite consensus disorder prediction 596 642 - -
Mch11g1379 910 MobiDBLite consensus disorder prediction 683 710 - -
Mch11g1379 910 MobiDBLite consensus disorder prediction 117 227 - -
Mch11g1379 910 MobiDBLite consensus disorder prediction 608 642 - -
Mch11g1379 910 MobiDBLite consensus disorder prediction 64 105 - -
Mch11g1379 910 MobiDBLite consensus disorder prediction 1 41 - -
Mch11g1379 910 Pfam LIM-domain binding protein 345 599 IPR029005 -
Mch11g1379 910 MobiDBLite consensus disorder prediction 207 227 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1379 Mch-Chr11:9841805 Mch4g1830 Mch-Chr4:21153202 0 dispersed
Mch11g1379 Mch-Chr11:9841805 Mch10g0179 Mch-Chr10:1067208 3.76E-107 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1379 - - - 0.0