Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g1395 | ATGGATGGCGACTCCACCCTTCTGGCCAGCTCCGGCGAGGCGGCACCACCGCCCGCCGAAGCTGTGGAAGAAGAAGAAGCTCATGACGAAGCTGGTGGCGGCGGCGGCGGGTCGAATTCCGGCGAAGAAGGCGACAAGAACAATTACGGCGGCAACCGGTGGCCTCGGCCGGAGACCTTGGCTCTGTTGAAGATAAGATCCGATATGGATGCAGTTTTTAGAGACGCAACTCATAAAGCTCCATTATGGGATGAAGTTTCAAGGAAGTTGGGAGAGCTTGGATTCAATCGGACTCCAAAGAAATGCAAGGAAAAATTCGAGAATGTTTATAAGTATCACAAAAGAACCAAAGAAGGCCGAAGTGGGAAATCCGATAATAGCAAAAAGGTGTATAGATTTTCCGATGAATTGGAGGCTTTTGGCAATCATCATCATCACAATCACATTTCATTTCAATCTCACCACCACCCAGCACCGGCACCGCCGCTGCCAATTCCTCGGCCGATGACGACGACGGTGACGGTGACGGTTCCGCCTTACAATCCTCCGGCGAAAATAGTCACATCTACTACTGTTCCATCGACCATGAACAACACAACAAACAACAACTCCTTGCCACCCAAGTCCTCCATCCCACTTTCCAATTTGCCAAAAATGGCCGCCAATGTGATGTTTTCGAGCTCGACTTCGTCGTCGACCGCGTCGGAGGAAGACCCGTTTCGGAGCCGGAGGAGGAAGAGGAGGAAGAGGAAGTGGAGTGATTTCTTCGTGAGGCTAACAAAGGAGGTGATAGAGAAGCAAGAGGGGCTCCAACTCAAGTTCTTAGAAGCATTGGAGAGAATTGAGAATCAAAGGAAGTTGAGAGATGAAGCATGGAGAATGAAAGAGCTGACAAGGGTGAATCAAGAACACGAAGTTCTCGTCCAAGAGATGTCGGTCGCTGCCGCCAAAGACGCCGCCGTCGTAGCATTTCTACAAAAAATATCCCCTTCTCCATTCCCATTCTCATCACCACTACCGCCGCAGTCGCAGCTGCAGTCAGGTCAGCTGCAGAACCACGACGAGAAAGAAAAGGTGACCACCGCTGTAGGAAACAGTCCATCGTCAAGATGGCCAAAGACTGAAGTGGAAGCACTAATAAGGCTGAGGACAGAGATGGAAATGAAGTACCAAGATCAGAATGGGCCAAAAGGGCTATTATGGGAAGAGATTTCAGCAGCCATGAGAGGGCTTGGATACAACAGAAGCTCAAAGAGGTGCAAAGAGAAATGGGAGAACATAAACAAATACTTCAAGAAGGTCAAAGACAGCAACAAGAAGAGGCCAGAAGATTCCAAGACATGTCCCTACTTCCACCAATTGGATGCTCTATACAAAGAGAAAGAAAAAAACACAACTTTTGACATCAATAGCCAAATGGAGCCATTGATGGTTGAGCCAGAGCAACAATGGCCACCTCCTCCATTGCAGCCTAATCAAATCATGGTAAATGGTGAAGGAATTCATGAACAAGAAGAAGAGGAAGAAGAAGAAGATGATGATGATGGAGGCAGTAGTAGCACAGATGTGGAAAATTGA | 1578 | 48.29 | MDGDSTLLASSGEAAPPPAEAVEEEEAHDEAGGGGGGSNSGEEGDKNNYGGNRWPRPETLALLKIRSDMDAVFRDATHKAPLWDEVSRKLGELGFNRTPKKCKEKFENVYKYHKRTKEGRSGKSDNSKKVYRFSDELEAFGNHHHHNHISFQSHHHPAPAPPLPIPRPMTTTVTVTVPPYNPPAKIVTSTTVPSTMNNTTNNNSLPPKSSIPLSNLPKMAANVMFSSSTSSSTASEEDPFRSRRRKRRKRKWSDFFVRLTKEVIEKQEGLQLKFLEALERIENQRKLRDEAWRMKELTRVNQEHEVLVQEMSVAAAKDAAVVAFLQKISPSPFPFSSPLPPQSQLQSGQLQNHDEKEKVTTAVGNSPSSRWPKTEVEALIRLRTEMEMKYQDQNGPKGLLWEEISAAMRGLGYNRSSKRCKEKWENINKYFKKVKDSNKKRPEDSKTCPYFHQLDALYKEKEKNTTFDINSQMEPLMVEPEQQWPPPPLQPNQIMVNGEGIHEQEEEEEEEDDDDGGSSSTDVEN | 525 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 10099829 | 10102356 | - | MC11g1154 | Mch11g1395 | 680329 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g1395 | 525 | MobiDBLite | consensus disorder prediction | 335 | 370 | - | - | |
Mch11g1395 | 525 | MobiDBLite | consensus disorder prediction | 148 | 169 | - | - | |
Mch11g1395 | 525 | CDD | GT1 | 52 | 117 | - | - | |
Mch11g1395 | 525 | MobiDBLite | consensus disorder prediction | 188 | 209 | - | - | |
Mch11g1395 | 525 | PANTHER | FI21293P1 | 26 | 503 | - | - | |
Mch11g1395 | 525 | FunFam | Trihelix transcription factor GT-2 | 371 | 433 | - | - | |
Mch11g1395 | 525 | FunFam | Trihelix transcription factor GT-2 | 54 | 115 | - | - | |
Mch11g1395 | 525 | Pfam | Myb/SANT-like DNA-binding domain | 52 | 132 | IPR044822 | - | |
Mch11g1395 | 525 | Pfam | Myb/SANT-like DNA-binding domain | 369 | 457 | IPR044822 | - | |
Mch11g1395 | 525 | SMART | sant | 50 | 112 | IPR001005 | - | |
Mch11g1395 | 525 | SMART | sant | 367 | 430 | IPR001005 | - | |
Mch11g1395 | 525 | MobiDBLite | consensus disorder prediction | 502 | 525 | - | - | |
Mch11g1395 | 525 | ProSiteProfiles | Myb-like domain profile. | 369 | 428 | IPR001005 | - | |
Mch11g1395 | 525 | MobiDBLite | consensus disorder prediction | 1 | 54 | - | - | |
Mch11g1395 | 525 | ProSiteProfiles | Myb-like domain profile. | 46 | 110 | IPR001005 | - | |
Mch11g1395 | 525 | CDD | GT1 | 369 | 435 | - | - | |
Mch11g1395 | 525 | Gene3D | - | 54 | 115 | - | - | |
Mch11g1395 | 525 | Gene3D | - | 371 | 433 | - | - | |
Mch11g1395 | 525 | MobiDBLite | consensus disorder prediction | 225 | 245 | - | - | |
Mch11g1395 | 525 | MobiDBLite | consensus disorder prediction | 477 | 525 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g1395 | Mch-Chr11:10099829 | Mch2g1820 | Mch-Chr2:17628389 | 7.34E-94 | dispersed | |
Mch11g1394 | Mch-Chr11:10063106 | Mch11g1395 | Mch-Chr11:10099829 | 8.71E-109 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
42633 | PF13837 | Myb_DNA-bind_4 | 1.20E-22 | CL0123 | Mch | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g1395 | - | - | - | 0.0 |