Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g1401 | ATGGGTCGGAAGAAGCCAACTGCACGGGATGATGACGGCGCTCCCGCGGCAGCTCAGGGTGGTGGGAAGTCGAAGAAAAAGACATTTGCAGTAGACGACGATGAGTACTCCATTGGAACTGAATTGTCTGAAGAAGCCCAAGTTCAGGAGGAGAAGGTCGTGATAACGGGGAAGAAGAAGGGTAAGAAGGGTAATTCAAAAGCTTCACAACTTAAAGAGGAAGAGGACGAGGAGGATGGGGATGGTGTTTCAGAGATTGTTATCACCGGGAAAAAGAAGGGTAAGTCGAAGAAGGGTGGAAGTAGCAGTGCTTTCACTGCTTCCGCTTTTGGTTTGCTTGATGAGGAGGGGAATGATGGCGCTGCTGATGATGATGATGAAGAATCTGTGGTAACCGGGGAAAAGGATGATGATGAAGGGGATGATTCCGTGATCAATTTTTCAGGTAAGAAGAAGTCGTCTAAGTCTTCTAAGAAGACTGGTTTTTCCGCTGCGTTCAGTGCTCTTGATGATGAGAATGATGAAGATGTGATTGATAATGAGATCAGAGTTGATGAAGATATTGATGACGAGCCTGTTATTGCATTTACAGGTAAGAAAAAGTCATCGAAAGGTGGTAAGAAGGCTGGGAATACATTTACAGCTTCTGGTTTTAGTGGTCTTGATAATGAGGATGAGGATGGAGATGCTAAGAAGGATGAGGATGAAGATATTGCATCAATTAGCTTCTCGGGTAAGAAAAAGAAGTCATCCAAGGCTTCAAAGAAAAGTGGCAATTTGTTTAGTGCAGCATTCCCTGATGAGGAAAATGATGGGGATGCTTCTATTTCAGAGCCAAATAAATTAAATGTTGATGGTGTTGATGAAGATGATGCCACTGTAATTGCATTTTCTGGAAAGAAAAAGTCCTCTAAGAAGAAAGGCAGCGGTATGGTTACTGCATTAAGTGATGAAAGTGTGCTGGGCAATGAAGTAAGAGATGTAGTCGGATCTGAAATATTGAATACAGCAAGTAGCAATATTGATTCTGATTTATCAAAAGCTAACAAGATGGAGGGGGTAGCAGAAACTTCAAAAAATAAGAAGAAAAAGAAAAAGAGTGGAAGGACTGCTCAAGAAGAAGATGATTTGGATAAGATTCTTGCTGAGCTAGGAGAGGGGCCTCCTACATCAAAACCAGCAGACCCTCCTCTTCCTTCACAAGAGGACAAAGTTGAGAATCCACCTGAGCTTGTTGCTCCTCCTGATGCATCAGCTGAAAAGGAAGCTGAAGAAGAGAGCACAGAATCAGCTGCAGCAAGGAAGAAGAAAAAGAAGAAGGAGAAGGAAAAGGAAAAAAAAGCTGCAGCAGCGGCCGCAGCAGCTGCTGCTGATGAGAAAATTGAGGAAGTAAACACTGAAATTATAGAACCCAAAAAAGGTGCTGCAAAAAGTAAAGTGCCCGAGAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAAGAGGCAATGGCTAGGAGAAAAGAAGAAGAAGAAAGAAGGAAAAGGGAGGAAGAAGAGAGGTTGAGAAAGGAAGAAGAGGAGAGGCGTAGGCAAGAAGAACTTGAAAGACAAGCTGAGGAGGCTAAGCGTAGGAAAAAGGAAAGAGAAAAAGAGAAGCTCCTACGAAAGAAACAGGAAGGCAAGCTGCTAACAGGGAAGCAAAAGGAAGAACAACGTAGGTTGGAGGCAATGAGGAACCAGATACTAGCAAATGCCGGGGGTTTACCTCTAGCTACTTCTGATCCTAGTGCACCAGCTAAGCGACCAAAATACCAGTCAAAGAAGACTAAACCAGCACATCATCAAACAAATGGGAGTGCTCAAACTAAGGTAGTGGAACATATGGAAGAAAAAACACAAGAAAAAGATGTGGTAGAGACTGAATTATTGGAGTCTGAGAAGATTGAAGATGTGGAGGAGTTGATGCCCGTGGAAGAAAAATCAGATGTTGTTGAGGCTACTGAAGATAATGAAGTTCAAGAAGATGAAGATGAGGATGAATGGGATGCAAAGAGTTGGGATGATGCTGTTGTTGATCTTTCCTTAAAAAGTTCCTTTGCTGATGAGGAGCTTGAATCAGAGCCTGAGAATGGCATGAAAAAAGATAGAAAGAATGGTGCACCAGCTGCACGTGATGCAGCTGCTCCTGCCCAAAAGAATTTACCTTCTCAGCCTTTAAAATCTCAAGATATTGAAAACAAAAAGAAGCAGCATGAGGCTGAGATTGTGGACAAGGACAAAAGAAAAGATGATGCTGTTAAGAAAAAGGCTCCAATTCCAGATGTTACTCCTAAACAACAGGAAGAAAATCTCCGCTCACCCATCTGCTGTATTATGGGGCATGTTGATACTGGTAAAACCAAGCTATTGGACTGTATTCGGGGTACAAATGTTCAAGAGGGAGAGGCAGGAGGTATTACTCAGCAGATTGGGGCAACATATTTTCCTGCTGAAAACATTCGTGAAAGGACTAGGGAACTGAAAGCTGATGCAAAGCTGAAGGTTCCTGGCTTACTTGTTATTGATACCCCTGGGCACGAGTCCTTTACCAACTTACGTTCTCGTGGTTCGGGTTTATGTGATCTTGCAATTTTGGTTGTTGACATCATGCATGGCTTAGAGCCACAAACAATAGAATCACTTAATCTCTTGAGAATGAGAAACACAGAATTTATTGTTGCTCTGAATAAGGTGGACAGACTTTATGGGTGGAAAACTATCCGCAATGCACCAATACTTAAAACAATGAAGCAGCAATCCAAGGATGTTCAGAATGAGTTCAATATGAGGCTTATTCAGATTATCACTCAATTTAAAGAGCAGGGATTGAATACTGAGTTGTATTATAAAAACAAAGAAATGGGGGAGACTTTCAGTATAGTACCTACAAGTGCTGTTACTGGTGAAGGTATTCCAGACTTGTTATTATTATTGGTGCAGTGGGCCCAGAAAACCATGACGGAGAAACTTACGTATAGTGATGAAGTGCAGTGTACGGTCTTAGAGGTCAAAGTTGTTGAAGGCCACGGAACCACTATTGATGTCATATTGGTTAATGGTGTGCTGCATGAAGGAGATCAAATAGTTGTTTGTGGCATGCAGGCAGGCCCAATTGTTACTACTATTCGAGCCCTGTTGACACCCCATCCAATGAAGGAGCTCCGAGTGAAGGGAACATATCTGCATCACAAGGAAATCAAGGCTGCTCAGGGAATCAAAATTACTGGACAGGGTCTTGAGCATGCTATTGCTGGCACCAGTCTTCATGTGGTAGGTCCTGAGGATGATTTGGATGACATCAAGGATTCAGCTATGGAAGATATGAAGTCAGTTTTGAGCAGGATAGACAAGACTGGTGAGGGAGTCTGTGTTCAAGCATCTACACTTGGTTCCTTGGAAGCATTGTTGGAGTTTTTGAAGTCCCCAGCAGTGACCATTCCTGTTAGTGGAATAAGTATAGGACCTGTTCATAAAAAAGACGTCATGAAAGCTAGTGTAATGCTTGAAAAGAAAAAAGAATATGCCACTATTTTGGCTTTTGATGTTAAAGTGACTCCAGAAGCCCGAGAACTTGCTGATGAGCTGGGAGTGAAGATTTTTATTGCTGATATCATTTATCACTTGTTCGACCAATTTAAGGCCTATATTGATAATCTTAAAGAGGAAAAGAAGAAGGAAGCTGCTGAGGAAGCAGTCTTTCCTTGTGTTCTCAAGATTTTACCAAATTGCATTTTCAACAAGAAGGATCCAATCGTGTTGGGGGTTGATGTAATTGATGGCATTGCCAAGGTTGGCACACCAATTTGTATTCCTCAAAGGGAATTTATAGATATTGGTCGCATTGCATCTATTGAAAATAATCACAAACCTGTTGATTATGCGAAGAAAGGGCAGAAGATAGCCATTAAGATAGTTGGCCATTCTTCGGAGGAGCAGCAAAAGATGTATGGTAGGCATTTTGATTTAGAAGATGAACTTGTCAGCCACATATCAAGGAAGTCCATTGACCTACTCAAAGCCAATTATCGGGATGACTTGTCCATGGATGAGTGGAGACTGTTGGTGAAACTGAAGAACCTTTTCAAGATACAATGA | 4113 | 42.11 | MGRKKPTARDDDGAPAAAQGGGKSKKKTFAVDDDEYSIGTELSEEAQVQEEKVVITGKKKGKKGNSKASQLKEEEDEEDGDGVSEIVITGKKKGKSKKGGSSSAFTASAFGLLDEEGNDGAADDDDEESVVTGEKDDDEGDDSVINFSGKKKSSKSSKKTGFSAAFSALDDENDEDVIDNEIRVDEDIDDEPVIAFTGKKKSSKGGKKAGNTFTASGFSGLDNEDEDGDAKKDEDEDIASISFSGKKKKSSKASKKSGNLFSAAFPDEENDGDASISEPNKLNVDGVDEDDATVIAFSGKKKSSKKKGSGMVTALSDESVLGNEVRDVVGSEILNTASSNIDSDLSKANKMEGVAETSKNKKKKKKSGRTAQEEDDLDKILAELGEGPPTSKPADPPLPSQEDKVENPPELVAPPDASAEKEAEEESTESAAARKKKKKKEKEKEKKAAAAAAAAAADEKIEEVNTEIIEPKKGAAKSKVPEKKVPKHVREMQEAMARRKEEEERRKREEEERLRKEEEERRRQEELERQAEEAKRRKKEREKEKLLRKKQEGKLLTGKQKEEQRRLEAMRNQILANAGGLPLATSDPSAPAKRPKYQSKKTKPAHHQTNGSAQTKVVEHMEEKTQEKDVVETELLESEKIEDVEELMPVEEKSDVVEATEDNEVQEDEDEDEWDAKSWDDAVVDLSLKSSFADEELESEPENGMKKDRKNGAPAARDAAAPAQKNLPSQPLKSQDIENKKKQHEAEIVDKDKRKDDAVKKKAPIPDVTPKQQEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTRELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDLAILVVDIMHGLEPQTIESLNLLRMRNTEFIVALNKVDRLYGWKTIRNAPILKTMKQQSKDVQNEFNMRLIQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAVTGEGIPDLLLLLVQWAQKTMTEKLTYSDEVQCTVLEVKVVEGHGTTIDVILVNGVLHEGDQIVVCGMQAGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAQGIKITGQGLEHAIAGTSLHVVGPEDDLDDIKDSAMEDMKSVLSRIDKTGEGVCVQASTLGSLEALLEFLKSPAVTIPVSGISIGPVHKKDVMKASVMLEKKKEYATILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFKAYIDNLKEEKKKEAAEEAVFPCVLKILPNCIFNKKDPIVLGVDVIDGIAKVGTPICIPQREFIDIGRIASIENNHKPVDYAKKGQKIAIKIVGHSSEEQQKMYGRHFDLEDELVSHISRKSIDLLKANYRDDLSMDEWRLLVKLKNLFKIQ | 1370 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 10212495 | 10225140 | + | MC11g1157 | Mch11g1401 | 680335 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g1401 | 1370 | MobiDBLite | consensus disorder prediction | 460 | 569 | - | - | |
Mch11g1401 | 1370 | Coils | Coil | 485 | 552 | - | - | |
Mch11g1401 | 1370 | Coils | Coil | 423 | 467 | - | - | |
Mch11g1401 | 1370 | Coils | Coil | 734 | 754 | - | - | |
Mch11g1401 | 1370 | Gene3D | Translation factors | 1233 | 1370 | - | - | |
Mch11g1401 | 1370 | Gene3D | Translation factors | 1000 | 1119 | - | - | |
Mch11g1401 | 1370 | MobiDBLite | consensus disorder prediction | 367 | 382 | - | - | |
Mch11g1401 | 1370 | MobiDBLite | consensus disorder prediction | 117 | 141 | - | - | |
Mch11g1401 | 1370 | FunFam | eukaryotic translation initiation factor 5B | 1000 | 1120 | - | - | |
Mch11g1401 | 1370 | PRINTS | GTP-binding elongation factor signature | 897 | 906 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Mch11g1401 | 1370 | PRINTS | GTP-binding elongation factor signature | 845 | 855 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Mch11g1401 | 1370 | PRINTS | GTP-binding elongation factor signature | 781 | 794 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Mch11g1401 | 1370 | PRINTS | GTP-binding elongation factor signature | 861 | 872 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Mch11g1401 | 1370 | PANTHER | TRANSLATION INITIATION FACTOR IF-2-RELATED | 429 | 1369 | IPR015760 | GO:0003743(PANTHER)|GO:0005737(PANTHER)|GO:0005739(PANTHER)|GO:0006413(PANTHER) | |
Mch11g1401 | 1370 | MobiDBLite | consensus disorder prediction | 169 | 185 | - | - | |
Mch11g1401 | 1370 | CDD | IF2_eIF5B | 780 | 990 | - | - | |
Mch11g1401 | 1370 | Pfam | Translation-initiation factor 2 | 1107 | 1219 | IPR023115 | - | |
Mch11g1401 | 1370 | Pfam | Elongation factor Tu domain 4 | 1240 | 1313 | IPR029459 | - | |
Mch11g1401 | 1370 | MobiDBLite | consensus disorder prediction | 334 | 773 | - | - | |
Mch11g1401 | 1370 | FunFam | Eukaryotic translation initiation factor 5B | 1233 | 1370 | - | - | |
Mch11g1401 | 1370 | FunFam | Eukaryotic translation initiation factor 5B | 771 | 999 | - | - | |
Mch11g1401 | 1370 | SUPERFAMILY | Initiation factor IF2/eIF5b, domain 3 | 1103 | 1232 | IPR036925 | - | |
Mch11g1401 | 1370 | Gene3D | - | 771 | 999 | IPR027417 | - | |
Mch11g1401 | 1370 | MobiDBLite | consensus disorder prediction | 691 | 714 | - | - | |
Mch11g1401 | 1370 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 777 | 993 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Mch11g1401 | 1370 | FunFam | Eukaryotic translation initiation factor 5B | 1120 | 1226 | - | - | |
Mch11g1401 | 1370 | MobiDBLite | consensus disorder prediction | 417 | 436 | - | - | |
Mch11g1401 | 1370 | MobiDBLite | consensus disorder prediction | 617 | 660 | - | - | |
Mch11g1401 | 1370 | NCBIfam | small GTP-binding protein domain | 782 | 907 | IPR005225 | GO:0005525(InterPro) | |
Mch11g1401 | 1370 | MobiDBLite | consensus disorder prediction | 192 | 321 | - | - | |
Mch11g1401 | 1370 | Gene3D | - | 1120 | 1226 | IPR036925 | - | |
Mch11g1401 | 1370 | MobiDBLite | consensus disorder prediction | 166 | 185 | - | - | |
Mch11g1401 | 1370 | Pfam | Elongation factor Tu GTP binding domain | 780 | 989 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Mch11g1401 | 1370 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 773 | 1069 | IPR027417 | - | |
Mch11g1401 | 1370 | CDD | aeIF5B_II | 1001 | 1112 | - | - | |
Mch11g1401 | 1370 | SUPERFAMILY | Translation proteins | 1237 | 1369 | IPR009000 | - | |
Mch11g1401 | 1370 | Coils | Coil | 1215 | 1235 | - | - | |
Mch11g1401 | 1370 | MobiDBLite | consensus disorder prediction | 1 | 160 | - | - | |
Mch11g1401 | 1370 | MobiDBLite | consensus disorder prediction | 735 | 768 | - | - | |
Mch11g1401 | 1370 | MobiDBLite | consensus disorder prediction | 661 | 678 | - | - | |
Mch11g1401 | 1370 | CDD | IF2_aeIF5B_IV | 1241 | 1336 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g0884 | Mch-Chr11:6001821 | Mch11g1401 | Mch-Chr11:10212495 | 3.09E-25 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g1401 | K03243 | - | csv:101204360 | 1990.31 |