Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1405 ATGGAGGAGATTCCTGGGAATTTGGGGTGGCCTCTTGTGGGGGAAAGTTTCTCTTTTTTATCTGATTTTAGTAGCACTGCTGGTATTTGTAGCTTCATGATCAACAGGCAGAAGAGATTTGGAAAGGTTTTCAAGACTAGCGTGTTGGGGAGACTAACTGTGTTCATGACGGGGAGCGATGCCGCGAAGGTTTTACTGACGGGGAAGGACGGCATGGTGAGCTTGAACCTGTTCTACACCGGGAAGCAGGTCCTCGGCCAGAGCAGCTTGCTTCAGACCAACGGCGAAGCCCACAAGCGGCTGCGTAGGCTGATCGGAGAACCGCTCTCGATCGACGGGTTGAGGAAATACTTTCAGTTCATCAACAATTTGGCCATTGAAACTCTAGATGAATGGTCAGGGAGAAGTGTTTTTGTTCTTGAAGAAGCTTCCACATTCACTCTCAAAGTAATTGGCAACATGATTATGAGCTTGGAGCCTAAAGGAGAAGAGCAAGAGAAGTTTAGAGACAATTTCAAGATAATCTCTTCTTGTTTTGCATCTTTGCCTCTTAATATCCCCGGGACCGCTTTCTACCGCGGTATGAAGGCACGGGAACGGATGTTCGAGATGTTAGATTCGATCATTGCGAAGCGACGAAGCGGAGAAATTTGCAGACAGGACTTCTTGGATTCACTAATAATAAAACACAAGAAAGCAGGAGCAGACAGTATCAGTGATGAAGAAAAACTGACAGATGCACAATTGAAGGACAATATTCTAACTCTGCTGATTGCTGGCCATGATACTACAACTGCAGCTCTCACTTGGCTCCTCAAATTTCTTGGGGAAAATCCTCATGTTTTGGAACAACTCAGGATTGAACACCAAGAAATTCAAGCAAGGAGAAGGGGAGAAAATCTCACATGGGGTGATGTAAACAATTTGCCTTACACTGCCAAAGTGATCAGTGAAACTCTGAGGAGAGCAACAATTCTACCATGGAATTCAAGAAGAGCTGCTCAAGATTTTGAAATTGGAGGGTACAAGATCAAGAAAGGGTGGTCAGTGAACTTGGATGTTGTTTCAATTCACCATGATGCTGCAGTTTTTCCTGAACCCAACAAATTTGATCCATCAAGATTTGAGGCATGCCCCTTGAAGCCCTTCAGCTTTCTTGGGTTTGGCAGTGGTCCAAGAATGTGTCCTGGAATCAACTTGGCAAAGCTCGAGATTTCGGTGTTCATCCATCACCTCGTTTGCAAATACAGGTGGACATCTTTGGAGGATGGTGATGATTCAGTGCAGCCAACTCTAGTGAGGATGCCTAGAAACAAGTATCCAATTAGAGTGGAGCCACTG 1341 45.19 MEEIPGNLGWPLVGESFSFLSDFSSTAGICSFMINRQKRFGKVFKTSVLGRLTVFMTGSDAAKVLLTGKDGMVSLNLFYTGKQVLGQSSLLQTNGEAHKRLRRLIGEPLSIDGLRKYFQFINNLAIETLDEWSGRSVFVLEEASTFTLKVIGNMIMSLEPKGEEQEKFRDNFKIISSCFASLPLNIPGTAFYRGMKARERMFEMLDSIIAKRRSGEICRQDFLDSLIIKHKKAGADSISDEEKLTDAQLKDNILTLLIAGHDTTTAALTWLLKFLGENPHVLEQLRIEHQEIQARRRGENLTWGDVNNLPYTAKVISETLRRATILPWNSRRAAQDFEIGGYKIKKGWSVNLDVVSIHHDAAVFPEPNKFDPSRFEACPLKPFSFLGFGSGPRMCPGINLAKLEISVFIHHLVCKYRWTSLEDGDDSVQPTLVRMPRNKYPIRVEPL 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10301687 10308094 + MC11g1160 Mch11g1405 680339

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1405 447 PANTHER CYTOCHROME P450 26 4 416 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Mch11g1405 447 PRINTS P450 superfamily signature 386 395 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1405 447 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1405 447 PRINTS P450 superfamily signature 314 325 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1405 447 PRINTS P450 superfamily signature 259 276 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1405 447 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 388 397 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch11g1405 447 Pfam Cytochrome P450 5 436 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1405 447 PRINTS E-class P450 group I signature 395 418 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1405 447 PRINTS E-class P450 group I signature 353 377 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1405 447 PRINTS E-class P450 group I signature 313 331 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1405 447 PRINTS E-class P450 group I signature 385 395 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1405 447 PRINTS E-class P450 group I signature 268 294 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1405 447 PRINTS E-class P450 group I signature 248 265 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1405 447 PRINTS E-class P450 group I signature 37 56 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1405 447 Gene3D Cytochrome P450 1 446 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1405 447 CDD CYP90-like 36 446 - -
Mch11g1405 447 SUPERFAMILY Cytochrome P450 3 446 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1405 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1405 Mch-Chr11:10301687 Mch1g1531 Mch-Chr1:16689224 1.83E-92 dispersed
Mch11g1405 Mch-Chr11:10301687 Mch8g0791 Mch-Chr8:5577004 1.51E-96 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1280 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone4ag1509 . . . . . . . . . . . . . . . . . . . . . . . . Bhi09g01475 . . . . Mch11g1405 . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012720 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 0 1 1 0 1 1 1 1 1 1 1 27