Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1412 ATGTCGTTAGTTAGGCCGTCTGATCCATCTCCATTATCGTACGGAAGTCGGAAGCTTTACTCGTTGAAGGGGACCAAGAATGCTCCTGATTTGTCGAACCAAACATTTGGCTCCGACAAGAATAGGACAATGTACATGAATGATTCATATTGCAGTGAGAACTATGAGAAGTATTTCCTCAACTTCCCGATAGAAGAGTTGTCAATTTCGGGCATTTCTACCAATTCGTTTCACCCAGATGCTGCCTCGTTTGGGCTAAGGGCTGATTCTCTCTCCCCTTTGTCTGGTTCGTTTACAATTTTTGATGCTTATCAATCAAACTCTGAATCAGCTTGCCTCGAGAGTACAAGTCCAGAAGCATTGGATTTTGAGGATGATCAAGTGAGACTGAAGTTGCAAGAATTGGAGAGAGATCTGCTTGGTGACCCCGATGCTGCTGATTATGAGGACGTGATATTTGCAAATGGCCAAAGCATGGAAATCGATAGCGAATGGGCAAACTCGATTCGAGACGCTCTGCTTCATGACTCGCCAAAGGAATCTTCATCGACTGATTCTAATTTCAGTACCATCAGCAGCAATAAGGATGCATCACAGATATCTTCACTGAATCCCAGACAAATGCTTTTAGAATGTGCTTCTGCTATCTCAGAGCAGAACATTGGAGAAGCATCAGCCATGATCGAACAGCTCCGGGGGATGGTTTCTGTTCAGGGAGATCCCTCACAGAGGATTGCTGCGTATATGGTGGAAGGTCTTGCTGCTCGGATATTGGAATCGGGTAAATGTCTTTATAAAGCTTTGAGATGCAAAGAACCCCCTTCCTCTGACCGTCTCGCAGCTATGCAGATCCTTTTCGAGGTCTGTCCTTGCTTCAAATTTGGCTTTATGGCTGCGAATTGTGCCATCATCGAGGCAGCAAAAGATGAGAAGAGAATTCATATAGTCGATTTTGACGTAAGCCAAGGAACTCAATACATAAAATTGATTCAGATGTTAGCAACCCAGCCAGGTAAGCCACCACACTTGAGGTTAACCGGGGTTGATGACCCCGAATCGGTACAGCGCCCTGTTGGAGGTCTTAGACACATTGGACAAAGGCTTGAGCAGCTGGCAAAAGCGCTGCGGGTTCCATTTGAGTTTCATGCAATCGCCTCAAATGCTTCAGATGTCACTCCCTCAATGCTCACCTCCCGACCTGGAGAAGCACTCATAGTCAACTTCGCTTTTCTGCTTCACCACATGCCAGATGAAAGCGTTTCGACCGTAAACCTACGAGACCGACTTCTCCGAATGGTCAAGAGCTTGAACCCAAAACTCGTAACGGTCGTCGAACAAGACATGAACGCAAACACCACCCCATTCTTTGCAAGATTCGTCGAAACCTACAAGTACTACTCAGCCATTTACGATTCTCTCGATGCGACACTCCCAAGGGACAGTCAAGACAGAATAAACGTCGAAAGGCAGTGCTTGGCAAAGGACATAGTCAACATAGTAGCTTGTGAAGGCGAAGACAGAGTAGAGCGATATGAAGTCGCAGGGAAATGGAGAGCAAGAATGATGATGGCGGGGTTCACTTCATGCTCGATGAGCGAAAACGTGACCGACCCGATCCGTAAACTTGTCGAGGAGTATTGCGACCGGTTCAAGATGTACGATGAAATGGGGACAATTCATTTTGGGTGGGAAGAGAAAAGTTTGGTTGTAACTTCGGCATGGAGGTAA 1728 46.3 MSLVRPSDPSPLSYGSRKLYSLKGTKNAPDLSNQTFGSDKNRTMYMNDSYCSENYEKYFLNFPIEELSISGISTNSFHPDAASFGLRADSLSPLSGSFTIFDAYQSNSESACLESTSPEALDFEDDQVRLKLQELERDLLGDPDAADYEDVIFANGQSMEIDSEWANSIRDALLHDSPKESSSTDSNFSTISSNKDASQISSLNPRQMLLECASAISEQNIGEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARILESGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKRIHIVDFDVSQGTQYIKLIQMLATQPGKPPHLRLTGVDDPESVQRPVGGLRHIGQRLEQLAKALRVPFEFHAIASNASDVTPSMLTSRPGEALIVNFAFLLHHMPDESVSTVNLRDRLLRMVKSLNPKLVTVVEQDMNANTTPFFARFVETYKYYSAIYDSLDATLPRDSQDRINVERQCLAKDIVNIVACEGEDRVERYEVAGKWRARMMMAGFTSCSMSENVTDPIRKLVEEYCDRFKMYDEMGTIHFGWEEKSLVVTSAWR 575
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10461550 10463797 + MC11g1164 Mch11g1412 680346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1412 575 ProSiteProfiles GRAS family profile. 196 575 IPR005202 -
Mch11g1412 575 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 189 574 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Mch11g1412 575 Pfam GRAS domain family 206 575 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1412 Mch-Chr11:10461550 Mch2g0480 Mch-Chr2:3477411 7.21E-147 dispersed
Mch11g1412 Mch-Chr11:10461550 Mch5g1847 Mch-Chr5:18703155 4.63E-64 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42635 PF03514 GRAS 3.90E-131 CL0063 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1412 K27748 - csv:101206511 1018.07