Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch11g1511 | ACGTGGGTTGGAGCTACGATTTCAGTTTGGATAATAGTTGGGTTGTGGTTACTGGTAGGAGCATGGAGAGTCGTGGACTGGATTTGGGTGAGACCGAAGAAATTAGAGAAGTACTTGAGAAATCAAGGTTTCGCCGGAAATTCTTACCGGATTCTCCACGGAGACCTCAAGTACAGATCCGCGGCGAATGATCGGGCCAACTCGAAGCCCATGAACTTCTCCAATCATATTGCTCCACGTGTCCTTCCTTCCGTTCATCAAACCATCCAAATTTATGGTAAAAATTCATTTATGTGGATTGGCCCCATTCCAAGAGTGCACATCATGGAGGCAGAACAGGTTAAAACAGCATATATGCTAATCAATGATATTCAAAAGCCAAGTATAAATCCTCTTGTTAAGTTGGTTGCTGATGGACTTGTAAGCTATGAAGGAGAAAAATGGGCTAAACACAGAAAAATAATCAACCCTGCATTTCATTTGAAGAAGTTGAAGGATATGGTACCGGCATTCTCTCACAGTTGTAACGAGATGGTTGACAAATGGGAAAGAATGGTCTCCAACGAGGGATTGTGCGAGTTGGATGTGATGCCTTATTTGCAAAATATGGCTGCTGATATTATTTCTCGAACAGCATTCGGGAGTAGCTATGAAAAGGGAAAAAGGATCTTCAAACTACAAGAAGAACTAGGTGTTCTTGTGCTTAAATCTACATTAGGGATTTATATTCCATGGAGGTTTTTACCCACCAAGTCAAACAATAAAATGAAAAAGATAGATAAAGAGATAAAAAGTTTGATATTAGGTATTATAAATGAAAGGCAAAAGGCTATGGAGGCAGGTGAAGCTGTACACAATGATCTATTAGGAATTCTCATGGAATCTAATCTCAACGAAATTCGACAACATGGAAACAACAAAGATGTTGGAATGAGCATAGAAGATGTGATTACAGAATGCAAGCTTTTCTATTTTGTTGGCGAAGAAACTACTGCTACATTACTAATTTGGACTATGATTTTATTGAGTTCACACTCGGAATGGCAAGAACGAGCAAGAGCAGAGGTTTTACAAGTCTTTGGTAACAAAGAGCCAGATTTTGATGGTTTAAGTCGTCTAAAAATTGTAACTATGATTTTGAACGAGGTTCTTCGATTATACCCACCAGTGGGTATGATAGTTCGTCTTGTTCAAAAGGAAACAAGGCTTGGACAATTGACTTTACCAGCTGGAGTGATGTTGGGGTTACCAACAGTTCTCATCCAACATGATCGTGAACTATGGGGTGAAGATGCCCTTGAATTCAAACCACAAAGATTTTCTGAGGGAGTTTCTAAAGCAACGAAAAATAACCAAACTGCTTTCATTCCATTTGGCTGGGGACCTCGAATATGCATTGGACAAAACTTTGCCATGATTGAGGCCAAAACGGCATTAGCAATAATCCTACAACGCTTCTCATTTGAACTTTCTTCATCATATACTCACGCTCCAACCTCTAGTGTAACAATTCAGCCCCAACATGGAGCTCATATTGTCCTACATAAACTG | 1551 | 39.78 | TWVGATISVWIIVGLWLLVGAWRVVDWIWVRPKKLEKYLRNQGFAGNSYRILHGDLKYRSAANDRANSKPMNFSNHIAPRVLPSVHQTIQIYGKNSFMWIGPIPRVHIMEAEQVKTAYMLINDIQKPSINPLVKLVADGLVSYEGEKWAKHRKIINPAFHLKKLKDMVPAFSHSCNEMVDKWERMVSNEGLCELDVMPYLQNMAADIISRTAFGSSYEKGKRIFKLQEELGVLVLKSTLGIYIPWRFLPTKSNNKMKKIDKEIKSLILGIINERQKAMEAGEAVHNDLLGILMESNLNEIRQHGNNKDVGMSIEDVITECKLFYFVGEETTATLLIWTMILLSSHSEWQERARAEVLQVFGNKEPDFDGLSRLKIVTMILNEVLRLYPPVGMIVRLVQKETRLGQLTLPAGVMLGLPTVLIQHDRELWGEDALEFKPQRFSEGVSKATKNNQTAFIPFGWGPRICIGQNFAMIEAKTALAIILQRFSFELSSSYTHAPTSSVTIQPQHGAHIVLHKL | 517 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 12267598 | 12271860 | + | MC11g1223 | Mch11g1511 | 680445 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch11g1511 | 517 | PRINTS | E-class P450 group I signature | 377 | 395 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1511 | 517 | PRINTS | E-class P450 group I signature | 203 | 221 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1511 | 517 | PRINTS | E-class P450 group I signature | 335 | 361 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1511 | 517 | PRINTS | E-class P450 group I signature | 455 | 465 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1511 | 517 | PRINTS | E-class P450 group I signature | 315 | 332 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1511 | 517 | PRINTS | E-class P450 group I signature | 465 | 488 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1511 | 517 | PRINTS | E-class P450 group I signature | 89 | 108 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1511 | 517 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 458 | 467 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch11g1511 | 517 | CDD | CYP72 | 82 | 513 | - | - | |
| Mch11g1511 | 517 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 15 | 509 | IPR050665 | GO:0004497(PANTHER) | |
| Mch11g1511 | 517 | Gene3D | Cytochrome P450 | 72 | 516 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1511 | 517 | Pfam | Cytochrome P450 | 86 | 492 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1511 | 517 | SUPERFAMILY | Cytochrome P450 | 79 | 515 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1511 | 517 | PRINTS | P450 superfamily signature | 378 | 389 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1511 | 517 | PRINTS | P450 superfamily signature | 456 | 465 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1511 | 517 | PRINTS | P450 superfamily signature | 465 | 476 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1511 | 517 | PRINTS | P450 superfamily signature | 326 | 343 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1511 | 517 | FunFam | Cytochrome P450 734A1 | 29 | 517 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch11g1511 | Mch-Chr11:12267598 | Mch8g1687 | Mch-Chr8:15255018 | 2.57E-233 | dispersed | |
| Mch11g1511 | Mch-Chr11:12267598 | Mch11g1516 | Mch-Chr11:12331416 | 0 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch11g1511 | - | - | - | 0.0 |