Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1516 ACGTGGGTCGGAGCTACGATTTCAGTTTGGATAACAATTGCAGTATGCTTAGTGGTAGGGGCATGGAGAGTCGTGGACTGGATTTGGTTGAGGCCGAAGAAATTAGAGAACTACTTGAGAAATCAAGGTTTCGCCGGAAATTCTTACCGGATTCTCCACGGAGACCTCAAGTACAGATCCGCGGCGAATGATCGGGCCAACTCGAAGCCCATGAACTTCTCCAATCATATTGCTCCACGTGTCGTTCCTTCTGTTCATCAAACCATCCAAATTTACGGTAAAAATTCATTTATGTGGATTGGCCCCATTCCAAGAGTGCACATCATGGAGGCAGAACAGGTTAAAACAGCATATATGCTAATCAATGATATCCAAAAGCCAAGTATAAACCCTCTTGTTAAATTGCTTGCTGATGGACTTGTAAACCATGAAGGAGCAAAATGGGTTAAACACAGAAAAATAATCAACCCTGCATTTCATTTGGAGAAGTTGAAGGATATGGTACCAGCATTCTCTCACAGTTGTAACGAGATGGTTGACAAATGGGAAAGAATGGTCTCTAACGAGGGACTGTGCGAGTTAGATGTGATGCCTTATCTGCAAAGTATGGCTGCAGATATTATTTCTCGAACAGCATTTGGGAGTAGCTACGAAAAAGGAAAAAGGATCTTCGAACTTCAGAAAGAACTAGGTGTTCTGGCGATTAAATCTACCTTAAGAATTTATATTCCAGGATGGAGGTTTTTACCCACCAAGTCAAACACTAAAATGAAAAAGATGGATAAAGAGATAAAAGGTTTGATATTGGGTATTATAAATGAAAGGCAAAAGGCTATGGAGGCCGGTGAAGCTGTACACAATGATCTATTAGGCATTCTCATGGAATCTAATCTCAACGAAATTCGACAACATGGAAACAACAAAGATGTTGGAATGAGCATAGAAGATGTTATCGAAGAATGCAAACTTTTCTATCTTGCTGGCCAAGAAACTACAGCTACATTACTAATTTGGACTATGATTTTGTTGAGTTCACACTCAGAATGGCAAGAACGAGCGAGAGCAGAAGTTTTACAAGTCTTTGGCAATAGGGAGCCAGACTTTGATGGTTTAAGTCGTCTAAAAGTTGTAACTATGATTTTGAACGAGGTTCTCCGGTTGTATCCACCAGTGGGTATGGTGAGTCGTCTTGTTCAAAAGGAAACAAGGTTTGGACAGTTGACTTTACCGGCCGGGGTGATGTTGGGGTTACCAACAATTCTCATCCAACATGATCGTGAACTATGGGGCGAAGATGCTCAAGAATTCAAACCACAGAGATTTTCTGAGGGAGTTTCTAAAGCAACAAAAAATAACCAAACTGCTTTCATTCCATTTGGTTGGGGACCTCGAATATGCATTGGACAAAACTTCGCCATGATTGAGGCCAAAACGGCATTGGCAATAATCCTACAACGCTTCTCATTTGAGCTTTCTTCATCATACACTCACGCTCCGACCTCCAGTATAACAATCCAGCCCCAACATGGAGCTCATGTCGTCTTACACAAACTAGAGTAA 1560 41.47 TWVGATISVWITIAVCLVVGAWRVVDWIWLRPKKLENYLRNQGFAGNSYRILHGDLKYRSAANDRANSKPMNFSNHIAPRVVPSVHQTIQIYGKNSFMWIGPIPRVHIMEAEQVKTAYMLINDIQKPSINPLVKLLADGLVNHEGAKWVKHRKIINPAFHLEKLKDMVPAFSHSCNEMVDKWERMVSNEGLCELDVMPYLQSMAADIISRTAFGSSYEKGKRIFELQKELGVLAIKSTLRIYIPGWRFLPTKSNTKMKKMDKEIKGLILGIINERQKAMEAGEAVHNDLLGILMESNLNEIRQHGNNKDVGMSIEDVIEECKLFYLAGQETTATLLIWTMILLSSHSEWQERARAEVLQVFGNREPDFDGLSRLKVVTMILNEVLRLYPPVGMVSRLVQKETRFGQLTLPAGVMLGLPTILIQHDRELWGEDAQEFKPQRFSEGVSKATKNNQTAFIPFGWGPRICIGQNFAMIEAKTALAIILQRFSFELSSSYTHAPTSSITIQPQHGAHVVLHKLE 519
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 12331416 12334669 + MC11g1225 Mch11g1516 680450
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1516 519 Gene3D Cytochrome P450 72 518 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1516 519 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1516 519 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1516 519 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1516 519 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1516 519 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1516 519 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1516 519 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1516 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 13 510 IPR050665 GO:0004497(PANTHER)
Mch11g1516 519 FunFam Cytochrome P450 734A1 29 519 - -
Mch11g1516 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch11g1516 519 SUPERFAMILY Cytochrome P450 79 516 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1516 519 CDD CYP72 82 514 - -
Mch11g1516 519 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1516 519 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1516 519 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1516 519 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch11g1516 519 Pfam Cytochrome P450 86 493 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0966 Mch-Chr11:6614508 Mch11g1516 Mch-Chr11:12331416 4.24E-236 dispersed
Mch11g0967 Mch-Chr11:6625282 Mch11g1516 Mch-Chr11:12331416 2.25E-281 dispersed
Mch11g0973 Mch-Chr11:6663620 Mch11g1516 Mch-Chr11:12331416 3.05E-246 dispersed
Mch11g1516 Mch-Chr11:12331416 Mch8g1687 Mch-Chr8:15255018 1.13E-237 dispersed
Mch11g1511 Mch-Chr11:12267598 Mch11g1516 Mch-Chr11:12331416 0 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1516 - - - 0.0