Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch11g1516 | ACGTGGGTCGGAGCTACGATTTCAGTTTGGATAACAATTGCAGTATGCTTAGTGGTAGGGGCATGGAGAGTCGTGGACTGGATTTGGTTGAGGCCGAAGAAATTAGAGAACTACTTGAGAAATCAAGGTTTCGCCGGAAATTCTTACCGGATTCTCCACGGAGACCTCAAGTACAGATCCGCGGCGAATGATCGGGCCAACTCGAAGCCCATGAACTTCTCCAATCATATTGCTCCACGTGTCGTTCCTTCTGTTCATCAAACCATCCAAATTTACGGTAAAAATTCATTTATGTGGATTGGCCCCATTCCAAGAGTGCACATCATGGAGGCAGAACAGGTTAAAACAGCATATATGCTAATCAATGATATCCAAAAGCCAAGTATAAACCCTCTTGTTAAATTGCTTGCTGATGGACTTGTAAACCATGAAGGAGCAAAATGGGTTAAACACAGAAAAATAATCAACCCTGCATTTCATTTGGAGAAGTTGAAGGATATGGTACCAGCATTCTCTCACAGTTGTAACGAGATGGTTGACAAATGGGAAAGAATGGTCTCTAACGAGGGACTGTGCGAGTTAGATGTGATGCCTTATCTGCAAAGTATGGCTGCAGATATTATTTCTCGAACAGCATTTGGGAGTAGCTACGAAAAAGGAAAAAGGATCTTCGAACTTCAGAAAGAACTAGGTGTTCTGGCGATTAAATCTACCTTAAGAATTTATATTCCAGGATGGAGGTTTTTACCCACCAAGTCAAACACTAAAATGAAAAAGATGGATAAAGAGATAAAAGGTTTGATATTGGGTATTATAAATGAAAGGCAAAAGGCTATGGAGGCCGGTGAAGCTGTACACAATGATCTATTAGGCATTCTCATGGAATCTAATCTCAACGAAATTCGACAACATGGAAACAACAAAGATGTTGGAATGAGCATAGAAGATGTTATCGAAGAATGCAAACTTTTCTATCTTGCTGGCCAAGAAACTACAGCTACATTACTAATTTGGACTATGATTTTGTTGAGTTCACACTCAGAATGGCAAGAACGAGCGAGAGCAGAAGTTTTACAAGTCTTTGGCAATAGGGAGCCAGACTTTGATGGTTTAAGTCGTCTAAAAGTTGTAACTATGATTTTGAACGAGGTTCTCCGGTTGTATCCACCAGTGGGTATGGTGAGTCGTCTTGTTCAAAAGGAAACAAGGTTTGGACAGTTGACTTTACCGGCCGGGGTGATGTTGGGGTTACCAACAATTCTCATCCAACATGATCGTGAACTATGGGGCGAAGATGCTCAAGAATTCAAACCACAGAGATTTTCTGAGGGAGTTTCTAAAGCAACAAAAAATAACCAAACTGCTTTCATTCCATTTGGTTGGGGACCTCGAATATGCATTGGACAAAACTTCGCCATGATTGAGGCCAAAACGGCATTGGCAATAATCCTACAACGCTTCTCATTTGAGCTTTCTTCATCATACACTCACGCTCCGACCTCCAGTATAACAATCCAGCCCCAACATGGAGCTCATGTCGTCTTACACAAACTAGAGTAA | 1560 | 41.47 | TWVGATISVWITIAVCLVVGAWRVVDWIWLRPKKLENYLRNQGFAGNSYRILHGDLKYRSAANDRANSKPMNFSNHIAPRVVPSVHQTIQIYGKNSFMWIGPIPRVHIMEAEQVKTAYMLINDIQKPSINPLVKLLADGLVNHEGAKWVKHRKIINPAFHLEKLKDMVPAFSHSCNEMVDKWERMVSNEGLCELDVMPYLQSMAADIISRTAFGSSYEKGKRIFELQKELGVLAIKSTLRIYIPGWRFLPTKSNTKMKKMDKEIKGLILGIINERQKAMEAGEAVHNDLLGILMESNLNEIRQHGNNKDVGMSIEDVIEECKLFYLAGQETTATLLIWTMILLSSHSEWQERARAEVLQVFGNREPDFDGLSRLKVVTMILNEVLRLYPPVGMVSRLVQKETRFGQLTLPAGVMLGLPTILIQHDRELWGEDAQEFKPQRFSEGVSKATKNNQTAFIPFGWGPRICIGQNFAMIEAKTALAIILQRFSFELSSSYTHAPTSSITIQPQHGAHVVLHKLE | 519 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 12331416 | 12334669 | + | MC11g1225 | Mch11g1516 | 680450 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch11g1516 | 519 | Gene3D | Cytochrome P450 | 72 | 518 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1516 | 519 | PRINTS | E-class P450 group I signature | 419 | 443 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1516 | 519 | PRINTS | E-class P450 group I signature | 466 | 489 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1516 | 519 | PRINTS | E-class P450 group I signature | 316 | 333 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1516 | 519 | PRINTS | E-class P450 group I signature | 89 | 108 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1516 | 519 | PRINTS | E-class P450 group I signature | 203 | 221 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1516 | 519 | PRINTS | E-class P450 group I signature | 456 | 466 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1516 | 519 | PRINTS | E-class P450 group I signature | 336 | 362 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1516 | 519 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 13 | 510 | IPR050665 | GO:0004497(PANTHER) | |
| Mch11g1516 | 519 | FunFam | Cytochrome P450 734A1 | 29 | 519 | - | - | |
| Mch11g1516 | 519 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 459 | 468 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch11g1516 | 519 | SUPERFAMILY | Cytochrome P450 | 79 | 516 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1516 | 519 | CDD | CYP72 | 82 | 514 | - | - | |
| Mch11g1516 | 519 | PRINTS | P450 superfamily signature | 379 | 390 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1516 | 519 | PRINTS | P450 superfamily signature | 457 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1516 | 519 | PRINTS | P450 superfamily signature | 327 | 344 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1516 | 519 | PRINTS | P450 superfamily signature | 466 | 477 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch11g1516 | 519 | Pfam | Cytochrome P450 | 86 | 493 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch11g0966 | Mch-Chr11:6614508 | Mch11g1516 | Mch-Chr11:12331416 | 4.24E-236 | dispersed | |
| Mch11g0967 | Mch-Chr11:6625282 | Mch11g1516 | Mch-Chr11:12331416 | 2.25E-281 | dispersed | |
| Mch11g0973 | Mch-Chr11:6663620 | Mch11g1516 | Mch-Chr11:12331416 | 3.05E-246 | dispersed | |
| Mch11g1516 | Mch-Chr11:12331416 | Mch8g1687 | Mch-Chr8:15255018 | 1.13E-237 | dispersed | |
| Mch11g1511 | Mch-Chr11:12267598 | Mch11g1516 | Mch-Chr11:12331416 | 0 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch11g1516 | - | - | - | 0.0 |