Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g1552 | ATGGTAAAGCAAACGCACTCATTGACTCAAATTCTTCACGAAATCCAATTGATCGGAGGCAGAATCACAGCCAGCGCAAAATTCTGTTCATCAATCTCTCATCCTTCCGCCTTCCAGATCAAACCGCTGGGGAATCTCACTTCCACGCGCTCCCGCTCCCACCACCGCCGGCCGCCCATGGCCACGGCCGCCGCCGCCGCCTCCGCCTCCGCTGCGGGTAACCCTTCACCCACCTCCTCTAACCCTTTCGTTTTCTCCCCCGATTCTCCCCCAACACTCGCTCTCACACCCGATCAGGTTAAGTTTTGTTCCGAAGCTCTTGATGTGTTCAGAGAGAAGCTCCAGACGCCTCATGTGATCAACCAGGAGTTCGCCCGGTTGCAGGCCAAGAGAATAACTGCATATGATATGAAGAGCAAGTGCTCTGTGGCTCTTGACAACGTCAACATAAACAAAAATCGTTACATGGATGTACTACCATTTGATGAGACTAGAGTTGTACTCGACTCATGTAAGGATTACAGACCTGCTGCAAGGGGTTATATCAATGCAAGCTTTATCTCGACTTCCTCCTCAAAAAGCATTTCTCAATTTGTTGCCACACAAGGTCCATTACCACACACTTATGAAGATTTCTGGGAGATGGTGTTTCAGTATAAATGCCCTGCAATTTTGATGCTTACTCGGCTAGTTGATAATTACAAGATGGTAAAGTGTGGAGATTATTTTCAGGCTGAAGATGGTCCTAGAGATTTTGGTAATATATATGTTGTCTCTCAATGGATAAAAACTTCCAACTCCTCTCTTATTCTGCGCCATTTGGAGGTGAACCGTAAAGAGTTGGAAGAATCTGTGGCTGTTTTGCATATTCAGTACGCAGAATGGCCTGACCATGGAGTTCCTACTGACACACTTGCTGTTCGTGAAATGTTAAAGAGGCTGTATCATTTACCTCCCGATCTCGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGGAGAACGGGAACATATTGTGCAATTCATAACACAATTCAGAGAATCCTTGCTGGAGACATGTCTGCTCTAGATCTTGTCAGTACCATTTCCACATTTAGGTCCCAGCGAATTGGAATGGTCCAAACACTG | 1128 | 46.81 | MVKQTHSLTQILHEIQLIGGRITASAKFCSSISHPSAFQIKPLGNLTSTRSRSHHRRPPMATAAAAASASAAGNPSPTSSNPFVFSPDSPPTLALTPDQVKFCSEALDVFREKLQTPHVINQEFARLQAKRITAYDMKSKCSVALDNVNINKNRYMDVLPFDETRVVLDSCKDYRPAARGYINASFISTSSSKSISQFVATQGPLPHTYEDFWEMVFQYKCPAILMLTRLVDNYKMVKCGDYFQAEDGPRDFGNIYVVSQWIKTSNSSLILRHLEVNRKELEESVAVLHIQYAEWPDHGVPTDTLAVREMLKRLYHLPPDLGPIVVHCSAGIGRTGTYCAIHNTIQRILAGDMSALDLVSTISTFRSQRIGMVQTL | 376 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 13007824 | 13015103 | - | MC11g1248 | Mch11g1552 | 680486 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g1552 | 376 | Coils | Coil | 271 | 291 | - | - | |
Mch11g1552 | 376 | MobiDBLite | consensus disorder prediction | 43 | 88 | - | - | |
Mch11g1552 | 376 | PANTHER | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE | 57 | 375 | IPR050348 | GO:0004725(PANTHER) | |
Mch11g1552 | 376 | Gene3D | Protein tyrosine phosphatase superfamily | 94 | 376 | IPR029021 | - | |
Mch11g1552 | 376 | Pfam | Protein-tyrosine phosphatase | 149 | 375 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Mch11g1552 | 376 | PRINTS | Protein tyrosine phosphatase signature | 180 | 187 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Mch11g1552 | 376 | PRINTS | Protein tyrosine phosphatase signature | 198 | 218 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Mch11g1552 | 376 | PRINTS | Protein tyrosine phosphatase signature | 285 | 302 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Mch11g1552 | 376 | PRINTS | Protein tyrosine phosphatase signature | 372 | 376 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Mch11g1552 | 376 | PRINTS | Protein tyrosine phosphatase signature | 356 | 371 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Mch11g1552 | 376 | PRINTS | Protein tyrosine phosphatase signature | 323 | 341 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Mch11g1552 | 376 | MobiDBLite | consensus disorder prediction | 69 | 87 | - | - | |
Mch11g1552 | 376 | ProSiteProfiles | PTP type protein phosphatase domain profile. | 120 | 376 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Mch11g1552 | 376 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 109 | 376 | IPR029021 | - | |
Mch11g1552 | 376 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 305 | 376 | IPR000387 | GO:0016311(InterPro) | |
Mch11g1552 | 376 | SMART | ptp_7 | 286 | 376 | IPR003595 | - | |
Mch11g1552 | 376 | FunFam | Tyrosine-protein phosphatase non-receptor type 12 | 97 | 376 | - | - | |
Mch11g1552 | 376 | SMART | PTPc_3 | 119 | 376 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Mch11g1552 | 376 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 326 | 336 | IPR016130 | GO:0016311(InterPro) |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g1552 | - | - | - | 0.0 |