Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1552 ATGGTAAAGCAAACGCACTCATTGACTCAAATTCTTCACGAAATCCAATTGATCGGAGGCAGAATCACAGCCAGCGCAAAATTCTGTTCATCAATCTCTCATCCTTCCGCCTTCCAGATCAAACCGCTGGGGAATCTCACTTCCACGCGCTCCCGCTCCCACCACCGCCGGCCGCCCATGGCCACGGCCGCCGCCGCCGCCTCCGCCTCCGCTGCGGGTAACCCTTCACCCACCTCCTCTAACCCTTTCGTTTTCTCCCCCGATTCTCCCCCAACACTCGCTCTCACACCCGATCAGGTTAAGTTTTGTTCCGAAGCTCTTGATGTGTTCAGAGAGAAGCTCCAGACGCCTCATGTGATCAACCAGGAGTTCGCCCGGTTGCAGGCCAAGAGAATAACTGCATATGATATGAAGAGCAAGTGCTCTGTGGCTCTTGACAACGTCAACATAAACAAAAATCGTTACATGGATGTACTACCATTTGATGAGACTAGAGTTGTACTCGACTCATGTAAGGATTACAGACCTGCTGCAAGGGGTTATATCAATGCAAGCTTTATCTCGACTTCCTCCTCAAAAAGCATTTCTCAATTTGTTGCCACACAAGGTCCATTACCACACACTTATGAAGATTTCTGGGAGATGGTGTTTCAGTATAAATGCCCTGCAATTTTGATGCTTACTCGGCTAGTTGATAATTACAAGATGGTAAAGTGTGGAGATTATTTTCAGGCTGAAGATGGTCCTAGAGATTTTGGTAATATATATGTTGTCTCTCAATGGATAAAAACTTCCAACTCCTCTCTTATTCTGCGCCATTTGGAGGTGAACCGTAAAGAGTTGGAAGAATCTGTGGCTGTTTTGCATATTCAGTACGCAGAATGGCCTGACCATGGAGTTCCTACTGACACACTTGCTGTTCGTGAAATGTTAAAGAGGCTGTATCATTTACCTCCCGATCTCGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGGAGAACGGGAACATATTGTGCAATTCATAACACAATTCAGAGAATCCTTGCTGGAGACATGTCTGCTCTAGATCTTGTCAGTACCATTTCCACATTTAGGTCCCAGCGAATTGGAATGGTCCAAACACTG 1128 46.81 MVKQTHSLTQILHEIQLIGGRITASAKFCSSISHPSAFQIKPLGNLTSTRSRSHHRRPPMATAAAAASASAAGNPSPTSSNPFVFSPDSPPTLALTPDQVKFCSEALDVFREKLQTPHVINQEFARLQAKRITAYDMKSKCSVALDNVNINKNRYMDVLPFDETRVVLDSCKDYRPAARGYINASFISTSSSKSISQFVATQGPLPHTYEDFWEMVFQYKCPAILMLTRLVDNYKMVKCGDYFQAEDGPRDFGNIYVVSQWIKTSNSSLILRHLEVNRKELEESVAVLHIQYAEWPDHGVPTDTLAVREMLKRLYHLPPDLGPIVVHCSAGIGRTGTYCAIHNTIQRILAGDMSALDLVSTISTFRSQRIGMVQTL 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13007824 13015103 - MC11g1248 Mch11g1552 680486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1552 376 Coils Coil 271 291 - -
Mch11g1552 376 MobiDBLite consensus disorder prediction 43 88 - -
Mch11g1552 376 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 57 375 IPR050348 GO:0004725(PANTHER)
Mch11g1552 376 Gene3D Protein tyrosine phosphatase superfamily 94 376 IPR029021 -
Mch11g1552 376 Pfam Protein-tyrosine phosphatase 149 375 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Mch11g1552 376 PRINTS Protein tyrosine phosphatase signature 180 187 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Mch11g1552 376 PRINTS Protein tyrosine phosphatase signature 198 218 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Mch11g1552 376 PRINTS Protein tyrosine phosphatase signature 285 302 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Mch11g1552 376 PRINTS Protein tyrosine phosphatase signature 372 376 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Mch11g1552 376 PRINTS Protein tyrosine phosphatase signature 356 371 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Mch11g1552 376 PRINTS Protein tyrosine phosphatase signature 323 341 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Mch11g1552 376 MobiDBLite consensus disorder prediction 69 87 - -
Mch11g1552 376 ProSiteProfiles PTP type protein phosphatase domain profile. 120 376 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Mch11g1552 376 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 109 376 IPR029021 -
Mch11g1552 376 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 305 376 IPR000387 GO:0016311(InterPro)
Mch11g1552 376 SMART ptp_7 286 376 IPR003595 -
Mch11g1552 376 FunFam Tyrosine-protein phosphatase non-receptor type 12 97 376 - -
Mch11g1552 376 SMART PTPc_3 119 376 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Mch11g1552 376 ProSitePatterns Tyrosine specific protein phosphatases active site. 326 336 IPR016130 GO:0016311(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1552 - - - 0.0