Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1624 ATGGCCGCCGTTCACCAAACCGCCGCCTCTCTCCGGCCGAAGCTCCTTCCGGCCGTCCGAGTCTTCCGGAGCCCTGCCGTGAGCCTCTCCTTTGCCGCCGCTTTTCCTTCCCGCCGACTCACCCTCGGCCATCGCTCTCACGGCGGAGCGAGGATGTCCGCAACCGCCGCCGGAAGCTACGCGGCGGCGCTGGCCGAAGTGGCGGCGGCGAACGACACGCTGGACGCGACGAGCAGCGACGTGGAGAAGATCGAGAGCGTGTTCGCGGAGGCGGCGGTGTACGAATTCTTCGCGAATCCGACGATCGAGATCGAGAAGAAACTGGCGTTGGTGGACGAGATCGCGTCGTCGTCGGCGCTGCAGCCGCACACGGCGAATTTCTTGAAAATCGTGGTGGACGCGAAGAGGATCGACATAATAAATGAGATCGTGAAGGAGTTCGAGTTGGTGTACAACAAATTGACGGAGACGGAGCTGGCGGTGGTGAGCTCGGTGGTGGCGCTGGAGCAGCAGCATCTGGCGCAGATTGCGAAGCAGGTCCAGAAATTGAGCGGAGCCAAGAACGTGAGGATCAAGACGCAGATCGATCCAAGCCTCGTGGCTGGATTCACCGTCAGGTTTGGGAATGCTGGATCCAAACTCATCGATTTGAGCGTCAAGAAGCAGCTAGAGGAGATCGCTGCACAGATCGATCTTGGCAACATTCAACTGGCTGTA 717 60.11 MAAVHQTAASLRPKLLPAVRVFRSPAVSLSFAAAFPSRRLTLGHRSHGGARMSATAAGSYAAALAEVAAANDTLDATSSDVEKIESVFAEAAVYEFFANPTIEIEKKLALVDEIASSSALQPHTANFLKIVVDAKRIDIINEIVKEFELVYNKLTETELAVVSSVVALEQQHLAQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNAGSKLIDLSVKKQLEEIAAQIDLGNIQLAV 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14858806 14859522 + MC11g1279 Mch11g1624 680558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1624 239 PRINTS ATP synthase delta subunit signature 205 223 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Mch11g1624 239 PRINTS ATP synthase delta subunit signature 56 75 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Mch11g1624 239 PRINTS ATP synthase delta subunit signature 136 150 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Mch11g1624 239 PRINTS ATP synthase delta subunit signature 187 202 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Mch11g1624 239 PRINTS ATP synthase delta subunit signature 125 136 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Mch11g1624 239 Hamap ATP synthase subunit delta [atpD]. 52 232 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Mch11g1624 239 Gene3D - 56 148 IPR026015 -
Mch11g1624 239 Pfam ATP synthase delta (OSCP) subunit 57 229 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Mch11g1624 239 NCBIfam ATP synthase F1 subunit delta 57 229 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Mch11g1624 239 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 189 208 IPR020781 GO:0015986(InterPro)|GO:0016020(InterPro)|GO:0046933(InterPro)
Mch11g1624 239 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 53 155 IPR026015 -
Mch11g1624 239 PANTHER ATP SYNTHASE DELTA CHAIN 15 230 IPR000711 GO:0009535(PANTHER)|GO:0009772(PANTHER)|GO:0009773(PANTHER)|GO:0015986(InterPro)|GO:0015986(PANTHER)|GO:0045261(PANTHER)|GO:0046933(PANTHER)|GO:0046933(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1624 Mch-Chr11:14858806 Mch5g0504 Mch-Chr5:3348771 1.52E-15 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1624 K02113 - csv:101211740 340.117