Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g1644 ATGGACGGCCCCCCTGCGGGCGATTTCTGTTCAATCTGCCATGGAAGTTTCAACATACCTTGCCAAGCAAATTGCTCGCACTGGTTCTGCGGAAGTTGTATAATGCTTGTTTGGGATCATGGATCATCACTCCAGCCATGTAAATGCCCCCTATGTCGCCGACAGATTACTTTATTGGTTCCTTCTGAGGCTTCAGCAAGGCAGCAAAGTAACCCTGAGGTTGCTCGAATTCTTAATAATATAAGGACTTATAACCATCATTTTGGTGACAACTCGGCTGGTTTAATTCAGCGAATGCAAGACCTTCCTTTTCTTCTACGGAGGTTGCTTCGGGAACTCCTCGATCCCCAGAGATCTCTTCCTCTTGTCATTAGAGCACGCGTTTACATTGCAATGGTACTGAGCGTAGTCTACACTCTGAGTCCCATCGATATCATACCAGAAGCAATGCTAGGAGTATTTGGACTGATGGATGATATCTTTATACTGCTCATCTGCTTCCTTTATATTGCTGCTATGTATCGATCGGTACTCTATTATCGCCATGGAGGATCTTGA 558 45.16 MDGPPAGDFCSICHGSFNIPCQANCSHWFCGSCIMLVWDHGSSLQPCKCPLCRRQITLLVPSEASARQQSNPEVARILNNIRTYNHHFGDNSAGLIQRMQDLPFLLRRLLRELLDPQRSLPLVIRARVYIAMVLSVVYTLSPIDIIPEAMLGVFGLMDDIFILLICFLYIAAMYRSVLYYRHGGS 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 15066921 15090300 + MC11g_new0357 Mch11g1644 680578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g1644 185 PANTHER UNCHARACTERIZED 3 182 IPR038896 GO:0061630(InterPro)
Mch11g1644 185 CDD RING-HC_RNF113A_B 10 61 - -
Mch11g1644 185 SUPERFAMILY RING/U-box 9 59 - -
Mch11g1644 185 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Mch11g1644 185 ProSiteProfiles Zinc finger RING-type profile. 10 53 IPR001841 -
Mch11g1644 185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 102 IPR013083 -
Mch11g1644 185 SMART ring_2 10 52 IPR001841 -
Mch11g1644 185 Pfam Protein of unknown function (DUF1232) 130 164 IPR010652 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g1644 K15707 - rcu:8281372 296.589