Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g1702 | ATGGCTTCCTTAGCAGCCTCCACCGCGGCCGCCTCCCTCGGCGTCTCCGAGATGCTCAGAAATCCCCTCAGCTTTGGCGGTGGCTCCCCCAGGTCGGCGCCTTCTGCTTCTAGCTCTGTCACCGTCAAGACTGTCGCGCTTTTCGGGAAGAAACCGGCCGCCAAGGCAAAGCCTTCCGCCGCTGTCTCTCCGGTCAACGACGAGCTCGCCAAGTGGTACGGTCCTGACAGAAGGATTTTCTTGCCGGATGGGCTGTTGGACCGATCTGAGATCCCTGAGTACTTGAACGGAGAAGTCCCCGGAGACTACGGCTACGATCCCTTTGGACTCAGCAAGAAACCAGAAGACTTCAGCAAATATCAGGCATTTGAATTGATCCACGCAAGATGGGCCATGCTTGGAGCTGCTGGTTTCATCATCCCTGAGGCCTTCAACAAATTCGGAGCCAACTGTGGCCCCGAGGCCGTTTGGTTCAAGACTGGAGCTTTGCTTTTGGATGGAAACACATTGAACTACTTTGGAAACAACATTCCCATCAACCTGATCGTTGCCGTGATTGCCGAGGTCGTCCTCGTCGGTGGCGCAGAATATTACAGAATCATCAACGGCTTGAATTTTGAAGATAAGCTTCACCCGGGTGGGCCGTTCGACCCATTGGGGCTGGCGGATGACCCCGACCAGGCAGCGATCTTGAAGGTGAAGGAGATAAAGAATGGAAGGCTGGCGATGTTTGCAATGCTCGGGTTTTACTTCCAGGCTTACGTGACGGGCGAAGGCCCTGTGGAGAACTTGGCCAAGCATTTGAGTGATCCCTTCGGAAACAATTTGCTCACTGTCATCTCAGGGAATGTCGAAAGAGTTCCAACTCTTTAA | 873 | 54.07 | MASLAASTAAASLGVSEMLRNPLSFGGGSPRSAPSASSSVTVKTVALFGKKPAAKAKPSAAVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNVERVPTL | 290 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 15941280 | 15944223 | + | MC11g1313 | Mch11g1702 | 680636 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g1702 | 290 | Pfam | Chlorophyll A-B binding protein | 92 | 253 | IPR022796 | - | |
Mch11g1702 | 290 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 30 | 279 | IPR001344 | GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro) | |
Mch11g1702 | 290 | Gene3D | Chlorophyll a/b binding protein domain | 79 | 290 | - | - | |
Mch11g1702 | 290 | SUPERFAMILY | Chlorophyll a-b binding protein | 72 | 280 | - | - | |
Mch11g1702 | 290 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 79 | 290 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g1702 | Mch-Chr11:15941280 | Mch1g2002 | Mch-Chr1:19602157 | 1.16E-69 | dispersed | |
Mch11g1702 | Mch-Chr11:15941280 | Mch2g0724 | Mch-Chr2:4940071 | 6.11E-71 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g1702 | K08916 | - | csv:101218137 | 512.301 |